Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 3.5e-124 448.4 236 100.0
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 1.4e-24 117.5 106 54.7
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 1.9e-24 117.1 92 65.2
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 7.0e-24 115.2 97 58.8
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 2.0e-23 113.6 99 63.6
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 2.0e-23 113.6 101 58.4
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 6.6e-22 108.6 101 53.5
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 1.1e-21 107.8 99 57.6
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 4.3e-21 105.9 100 53.0
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 2.3e-19 100.1 106 51.9
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 2.3e-19 100.1 106 51.9
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 6.8e-19 98.6 102 52.9
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.2e-18 97.8 96 57.3
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 3.4e-18 96.3 91 60.4
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 9.8e-18 94.7 99 50.5
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 2.2e-17 93.6 97 51.5
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 4.9e-17 92.4 92 57.6
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 6.4e-17 92.0 98 57.1
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 4.1e-16 89.4 93 51.6
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 5.4e-16 89.0 79 58.2
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 5.4e-16 89.0 80 57.5
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 9.2e-16 88.2 91 56.0
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 1.6e-15 87.4 114 47.4
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 1.6e-15 87.4 92 52.2
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 4.6e-15 85.9 93 51.6
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 4.6e-15 85.9 83 55.4
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 6.0e-15 85.5 97 50.5
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 7.8e-15 85.1 103 50.5
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 1.0e-14 84.7 106 47.2
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 1.7e-14 84.0 110 49.1
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 3.0e-14 83.2 93 51.6
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 6.6e-14 82.0 122 43.4
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 8.6e-14 81.6 106 45.3
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 1.1e-13 81.3 120 46.7
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 1.1e-13 81.3 101 47.5
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 1.1e-13 81.3 101 47.5
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 2.5e-13 80.1 85 51.8
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 3.3e-13 79.7 66 62.1
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 3.3e-13 79.7 102 48.0
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 4.3e-13 79.3 122 41.8
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 4.3e-13 79.3 99 44.4
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 5.6e-13 79.0 109 45.9
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 5.6e-13 79.0 104 46.2
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 7.3e-13 78.6 67 59.7
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 9.5e-13 78.2 104 46.2
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 9.5e-13 78.2 78 56.4
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 1.2e-12 77.8 108 45.4
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 1.6e-12 77.4 100 51.0
Nitab4.5_0000079g0240 Nicotiana tabacum HOM05D007970 ORTHO05D009943 1.6e-12 77.4 56 64.3
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.1e-12 77.0 105 44.8
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 2.1e-12 77.0 122 41.0
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 2.8e-12 76.6 105 44.8
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 1.8e-11 73.9 93 41.9
Gohir.D01G161700 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.3e-11 73.6 118 43.2
Gorai.002G200600 Gossypium raimondii HOM05D007970 ORTHO05D009943 2.3e-11 73.6 118 43.2
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 5.2e-11 72.4 112 45.5
MBI01_g17601_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 8.9e-11 71.6 82 45.1
SGA_v2.0_scaffold58G20343 Striga asiatica HOM05D007970 ORTHO05D009943 2.6e-10 70.1 104 43.3
Nitab4.5_0004867g0050 Nicotiana tabacum HOM05D007970 ORTHO05D009943 4.4e-10 69.3 60 56.7
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 6.4e-09 65.5 106 40.6
QL11p052437 Quercus lobata HOM05D007970 ORTHO05D009943 6.4e-09 65.5 115 41.7
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 8.4e-09 65.1 115 36.5
TWI53G1355 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 8.4e-09 65.1 98 40.8
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 1.9e-08 63.9 126 34.9
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 2.4e-08 63.5 109 39.4
Glyma.03G200500 Glycine max HOM05D006872 ORTHO05D006261 3.2e-08 63.2 72 45.8
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 3.2e-08 63.2 126 35.7
Peaxi162Scf00373g00094 Petunia axillaris HOM05D007970 ORTHO05D009943 3.2e-08 63.2 40 70.0
Sabra06G0158200 Salix brachista HOM05D006872 ORTHO05D006261 3.2e-08 63.2 93 43.0
Atru.chr5.3444 Acer truncatum HOM05D007970 ORTHO05D009943 5.4e-08 62.4 105 37.1
Prupe.6G139500 Prunus persica HOM05D021165 ORTHO05D006261 5.4e-08 62.4 126 37.3
Potri.006G205200 Populus trichocarpa HOM05D006872 ORTHO05D006261 7.1e-08 62.0 93 41.9
Sabra16G0075400 Salix brachista HOM05D006872 ORTHO05D006261 7.1e-08 62.0 68 50.0
Glyma.19G198100 Glycine max HOM05D006872 ORTHO05D006261 9.2e-08 61.6 72 45.8
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 1.2e-07 61.2 73 50.7
CDE02G4309 Ceratophyllum demersum HOM05D006872 ORTHO05D006261 1.2e-07 61.2 93 43.0
TWI77G0288 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 1.2e-07 61.2 85 44.7
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 1.2e-07 61.2 69 53.6
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 1.6e-07 60.8 83 50.6
COL.COLO4_29613 Corchorus olitorius HOM05D006872 ORTHO05D006261 1.6e-07 60.8 69 52.2
Thecc.05G100900 Theobroma cacao HOM05D006872 ORTHO05D006261 1.6e-07 60.8 69 52.2
unitig_578.g16361 Utricularia gibba HOM05D006872 ORTHO05D006261 2.1e-07 60.5 92 41.3
Duzib128G0031 Durio zibethinus HOM05D006872 ORTHO05D006261 3.5e-07 59.7 101 39.6
ECA238G4730 Erigeron canadensis HOM05D006872 ORTHO05D006261 3.5e-07 59.7 73 46.6
Actinidia07935 Actinidia chinensis HOM05D006872 ORTHO05D006261 7.8e-07 58.5 73 49.3
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 1.0e-06 58.2 71 47.9
SalBow5G3820 Salvia bowleyana HOM05D006872 ORTHO05D006261 1.0e-06 58.2 85 43.5
CsaV3_3G037750 Cucumis sativus L. HOM05D006872 ORTHO05D006261 1.3e-06 57.8 88 37.5
Phvul.007G269600 Phaseolus vulgaris HOM05D006872 ORTHO05D006261 1.3e-06 57.8 96 37.5
SalBow6G0243 Salvia bowleyana HOM05D006872 ORTHO05D006261 1.3e-06 57.8 86 44.2
MELO3C009518.2 Cucumis melo HOM05D006872 ORTHO05D006261 1.7e-06 57.4 88 36.4
MELO3C034691.2 Cucumis melo HOM05D007970 ORTHO05D009943 1.7e-06 57.4 79 46.8
Potri.016G072500 Populus trichocarpa HOM05D006872 ORTHO05D006261 1.7e-06 57.4 68 45.6
Rhsim04G0129900 Rhododendron simsii HOM05D006872 ORTHO05D006261 1.7e-06 57.4 106 35.8
Gohir.D01G192400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 2.3e-06 57.0 69 47.8
Gorai.002G236200 Gossypium raimondii HOM05D006872 ORTHO05D006261 2.3e-06 57.0 69 47.8
Solyc01g007770.2 Solanum lycopersicum HOM05D006872 ORTHO05D006261 2.3e-06 57.0 65 49.2
Sopen01g003310 Solanum pennellii HOM05D006872 ORTHO05D006261 2.3e-06 57.0 65 49.2
Nitab4.5_0011425g0030 Nicotiana tabacum HOM05D006872 ORTHO05D006261 3.0e-06 56.6 84 41.7
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 3.0e-06 56.6 66 53.0
CiPaw.10G015400 Carya illinoinensis HOM05D006872 ORTHO05D006261 3.9e-06 56.2 80 43.8
Psat3g030200 Pisum sativum HOM05D006872 ORTHO05D006261 3.9e-06 56.2 91 41.8
EL10Ac7g16814 Beta vulgaris HOM05D006872 ORTHO05D006261 5.1e-06 55.8 100 41.0
Ca_09043_v3 Cicer arietinum L. HOM05D006872 ORTHO05D006261 5.1e-06 55.8 69 44.9
DCAR_022819 Daucus carota HOM05D046813 ORTHO05D009943 5.1e-06 55.8 97 33.0
DCAR_022820 Daucus carota HOM05D046813 ORTHO05D009943 5.1e-06 55.8 97 33.0
FvH4_6g19940 Fragaria vesca HOM05D006872 ORTHO05D006261 5.1e-06 55.8 93 37.6
FAN05G2500 Fragaria x ananassa HOM05D006872 ORTHO05D006261 5.1e-06 55.8 93 37.6
FAN05G3358 Fragaria x ananassa HOM05D006872 ORTHO05D006261 5.1e-06 55.8 93 37.6
FAN14G4576 Fragaria x ananassa HOM05D006872 ORTHO05D006261 5.1e-06 55.8 93 37.6
PGSC0003DMG400016417 Solanum tuberosum HOM05D006872 ORTHO05D006261 5.1e-06 55.8 65 47.7
Gohir.A01G202400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 6.6e-06 55.5 69 46.4


User provided reference genes

Program Settings