Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015466.1 Olea europaea HOM05D005470 ORTHO05D006855 8.7e-176 620.2 304 100.0
MSTRG.21429 Avicennia marina HOM05D005470 ORTHO05D006855 7.7e-132 474.2 318 75.5
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 1.0e-131 473.8 311 76.8
Cc01_g17220 Coffea canephora HOM05D005470 ORTHO05D006855 2.7e-129 465.7 319 72.7
Migut.D00523 Erythranthe guttata HOM05D005470 ORTHO05D006855 4.7e-129 464.9 312 76.9
Haze_24781 Corylus avellana HOM05D005470 ORTHO05D006855 2.3e-128 462.6 322 69.9
vmacro02749 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 6.7e-128 461.1 323 72.1
Hma1.2p1_1061F.1_g253380 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 8.8e-128 460.7 317 71.9
TAR365G1033 Trochodendron aralioides HOM05D005470 ORTHO05D006855 8.8e-128 460.7 315 72.4
CSS0013378 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 4.4e-127 458.4 319 71.8
Migut.I00044 Erythranthe guttata HOM05D005470 ORTHO05D006855 9.7e-127 457.2 313 75.1
RcHm_v2.0_Chr6g0285101 Rosa chinensis HOM05D005470 ORTHO05D006855 1.7e-126 456.4 310 71.6
FvH4_2g19300 Fragaria vesca HOM05D005470 ORTHO05D006855 2.8e-126 455.7 310 72.3
FAN24G1307 Fragaria x ananassa HOM05D005470 ORTHO05D006855 3.7e-126 455.3 310 71.9
Solyc09g061680.3 Solanum lycopersicum HOM05D005470 ORTHO05D006855 4.8e-126 454.9 314 72.3
arahy.Tifrunner.gnm1.ann1.07T9WF Arachis hypogaea HOM05D005470 ORTHO05D006855 6.3e-126 454.5 309 71.2
PSO478G2025 Papaver somniferum HOM05D005470 ORTHO05D006855 6.3e-126 454.5 312 73.4
Lj2A1133T34 Lonicera japonica HOM05D005470 ORTHO05D006855 8.2e-126 454.1 314 73.6
Nitab4.5_0000866g0080 Nicotiana tabacum HOM05D005470 ORTHO05D006855 8.2e-126 454.1 318 71.1
Potri.002G240800 Populus trichocarpa HOM05D005470 ORTHO05D006855 8.2e-126 454.1 316 70.6
Sopen09g024670 Solanum pennellii HOM05D005470 ORTHO05D006855 8.2e-126 454.1 314 71.7
Cpa.g.sc8.172 Carica papaya HOM05D005470 ORTHO05D006855 1.4e-125 453.4 307 72.3
QL03p049466 Quercus lobata HOM05D005470 ORTHO05D006855 1.8e-125 453.0 307 71.7
arahy.Tifrunner.gnm1.ann1.KE0QUS Arachis hypogaea HOM05D005470 ORTHO05D006855 2.4e-125 452.6 311 71.4
Nitab4.5_0000866g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 2.4e-125 452.6 318 70.4
Duzib211G0062 Durio zibethinus HOM05D005470 ORTHO05D006855 4.1e-125 451.8 317 70.7
MD10G1166100 Malus domestica HOM05D005470 ORTHO05D006855 4.1e-125 451.8 316 69.6
PSO017G3643 Papaver somniferum HOM05D005470 ORTHO05D006855 4.1e-125 451.8 312 72.8
Gohir.D07G162300 Gossypium hirsutum HOM05D005470 ORTHO05D006855 5.3e-125 451.4 321 70.4
Gorai.001G185900 Gossypium raimondii HOM05D005470 ORTHO05D006855 5.3e-125 451.4 321 70.4
Actinidia37584 Actinidia chinensis HOM05D005470 ORTHO05D006855 9.1e-125 450.7 313 71.6
Nitab4.5_0003790g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 9.1e-125 450.7 318 70.8
Dinv04663 Davidia involucrata HOM05D005470 ORTHO05D006855 1.2e-124 450.3 301 73.8
Sabra02G0183400 Salix brachista HOM05D005470 ORTHO05D006855 1.2e-124 450.3 316 70.3
PGSC0003DMG400002375 Solanum tuberosum HOM05D005470 ORTHO05D006855 1.2e-124 450.3 314 70.7
CiPaw.04G106400 Carya illinoinensis HOM05D005470 ORTHO05D006855 1.6e-124 449.9 314 70.4
CAN.G1273.33 Capsicum annuum HOM05D005470 ORTHO05D006855 2.6e-124 449.1 314 70.1
PGR083G1301 Punica granatum HOM05D005470 ORTHO05D006855 4.5e-124 448.4 314 71.7
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 4.5e-124 448.4 298 73.8
Gohir.A07G156000 Gossypium hirsutum HOM05D005470 ORTHO05D006855 5.9e-124 448.0 321 70.1
Lalb_Chr19g0125551 Lupinus albus HOM05D005470 ORTHO05D006855 5.9e-124 448.0 304 72.7
Eucgr.H00804 Eucalyptus grandis HOM05D005470 ORTHO05D006855 1.0e-123 447.2 307 71.3
Thecc.01G227800 Theobroma cacao HOM05D005470 ORTHO05D006855 1.7e-123 446.4 317 70.0
TPR.G15281 Trifolium pratense HOM05D005470 ORTHO05D006855 1.7e-123 446.4 311 71.4
Nn3g19926 Nelumbo nucifera HOM05D005470 ORTHO05D006855 2.9e-123 445.7 327 67.9
arahy.Tifrunner.gnm1.ann1.4GE7F8 Arachis hypogaea HOM05D005470 ORTHO05D006855 5.0e-123 444.9 312 70.5
Sc17g0002580 Simmondsia chinensis HOM05D005470 ORTHO05D006855 5.0e-123 444.9 301 71.1
Ca_07533_v3 Cicer arietinum L. HOM05D005470 ORTHO05D006855 6.5e-123 444.5 314 71.7
Psat3g144240 Pisum sativum HOM05D005470 ORTHO05D006855 6.5e-123 444.5 311 70.1
Manes.12G042650 Manihot esculenta HOM05D005470 ORTHO05D006855 8.5e-123 444.1 318 69.8
Medtr7g058920 Medicago truncatula HOM05D005470 ORTHO05D006855 1.9e-122 443.0 311 70.7
Lj1g0018515 Lotus japonicus HOM05D005470 ORTHO05D006855 5.5e-122 441.4 306 70.9
GSVIVG01028578001 Vitis vinifera HOM05D005470 ORTHO05D006855 7.2e-122 441.0 296 73.0
Atru.chr5.1498 Acer truncatum HOM05D005470 ORTHO05D006855 1.6e-121 439.9 307 70.0
HanXRQChr04g0110691 Helianthus annuus HOM05D005470 ORTHO05D006855 1.0e-120 437.2 306 69.9
DCAR_018553 Daucus carota HOM05D005470 ORTHO05D006855 1.4e-120 436.8 296 73.3
CANSAT56G1556 Cannabis sativa HOM05D005470 ORTHO05D006855 1.8e-120 436.4 323 67.2
Hund18358 Selenicereus undatus HOM05D005470 ORTHO05D006855 1.8e-120 436.4 316 68.7
Glyma.18G172500 Glycine max HOM05D005470 ORTHO05D006855 3.0e-120 435.6 302 69.5
Phvul.007G209400 Phaseolus vulgaris HOM05D005470 ORTHO05D006855 5.2e-120 434.9 309 68.6
THA.LOC104802678 Tarenaya hassleriana HOM05D005470 ORTHO05D006855 2.0e-119 433.0 311 68.5
Sed0016487 Sechium edule HOM05D005470 ORTHO05D006855 3.4e-119 432.2 303 69.3
EL10Ac7g17787 Beta vulgaris HOM05D005470 ORTHO05D006855 7.5e-119 431.0 307 68.7
Aa31sc866G40 Aethionema arabicum HOM05D005470 ORTHO05D006855 4.8e-118 428.3 318 67.6
AUR62031834 Chenopodium quinoa HOM05D005470 ORTHO05D006855 4.8e-118 428.3 309 68.6
VMungo0516G0001 Vigna mungo HOM05D005470 ORTHO05D006855 8.3e-118 427.6 309 68.0
Aqoxy2G03764 Aquilegia oxysepala HOM05D005470 ORTHO05D006855 7.0e-117 424.5 313 69.3
AT5G48840 Arabidopsis thaliana HOM05D005470 ORTHO05D006855 5.9e-116 421.4 307 67.4
AL8G22020 Arabidopsis lyrata HOM05D005470 ORTHO05D006855 7.7e-116 421.0 307 67.8
ClCG07G001860 Citrullus lanatus HOM05D005470 ORTHO05D006855 1.3e-115 420.2 311 65.6
TWI75G1873 Tripterygium wilfordii HOM05D005470 ORTHO05D006855 5.0e-115 418.3 307 66.8
CsaV3_3G028840 Cucumis sativus L. HOM05D005470 ORTHO05D006855 6.5e-115 417.9 309 67.3
Lsat_1_v5_gn_8_90101 Lactuca sativa HOM05D005470 ORTHO05D006855 8.5e-115 417.5 319 66.8
BraA06t26801Z Brassica rapa HOM05D005470 ORTHO05D006855 1.5e-114 416.8 315 66.3
Ah.08g214020 Amaranthus hybridus HOM05D005470 ORTHO05D006855 4.2e-114 415.2 339 63.1
BcaC06g30753 Brassica carinata HOM05D005470 ORTHO05D006855 1.6e-113 413.3 315 65.7
MELO3C026704.2 Cucumis melo HOM05D005470 ORTHO05D006855 1.6e-113 413.3 309 66.7
BolC7t44465H Brassica oleracea HOM05D005470 ORTHO05D006855 2.7e-113 412.5 315 65.7
C07p39460 Brassica napus HOM05D005470 ORTHO05D006855 1.8e-112 409.8 316 65.2
Peaxi162Scf00107g01116 Petunia axillaris HOM05D005470 ORTHO05D006855 3.0e-112 409.1 314 65.0
Sp2g19240 Schrenkiella parvula HOM05D005470 ORTHO05D006855 4.0e-112 408.7 313 64.2
Ciclev10021316m.g Citrus clementina HOM05D005470 ORTHO05D006855 5.2e-112 408.3 305 68.2
Cfa002558 Carpinus fangiana HOM05D005470 ORTHO05D006855 2.0e-111 406.4 323 64.4
CsaV3_6G036910 Cucumis sativus L. HOM05D005470 ORTHO05D006855 1.7e-110 403.3 301 65.8
Prupe.8G204600 Prunus persica HOM05D005470 ORTHO05D006855 1.7e-110 403.3 282 69.9
Carub.0008s0857 Capsella rubella HOM05D005470 ORTHO05D006855 2.2e-110 402.9 309 63.4
CARHR182880 Cardamine hirsuta HOM05D005470 ORTHO05D006855 8.3e-110 401.0 309 64.1
Thhalv10004618m.g Eutrema salsugineum HOM05D005470 ORTHO05D006855 1.1e-109 400.6 315 63.5
CDE01G0096 Ceratophyllum demersum HOM05D005470 ORTHO05D006855 5.9e-108 394.8 337 59.3
Os03g0851800 Oryza sativa ssp. japonica HOM05D005470 ORTHO05D006855 3.2e-101 372.5 311 59.5
HPP92_021568 Vanilla planifolia HOM05D005470 ORTHO05D006855 5.4e-101 371.7 306 62.1
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 5.0e-99 365.2 301 62.5
ATR0736G181 Amborella trichopoda HOM05D005470 ORTHO05D006855 1.5e-98 363.6 326 55.5
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 7.3e-98 361.3 393 51.1
Zm00001eb064670 Zea mays HOM05D005470 ORTHO05D006855 7.3e-98 361.3 313 58.8
BcaC06g30729 Brassica carinata HOM05D005470 ORTHO05D006855 3.6e-97 359.0 273 66.7
Hma1.2p1_1061F.1_g253390 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 1.5e-95 353.6 226 75.7
Mapoly0006s0023 Marchantia polymorpha HOM05D005470 ORTHO05D006855 2.2e-94 349.7 301 59.5
SEGI_32261 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 2.9e-94 349.4 307 57.7
SMO144G0038 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 1.1e-93 347.4 288 56.9
Pp3c24_12730 Physcomitrium patens HOM05D005470 ORTHO05D006855 3.2e-93 345.9 288 57.6
SHI28627 Sapria himalayana HOM05D005470 ORTHO05D006855 4.1e-93 345.5 298 60.4
SMO351G0371 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 2.0e-92 343.2 289 57.1
TAR365G0091 Trochodendron aralioides HOM05D005470 ORTHO05D006855 1.2e-89 334.0 227 71.8
AUR62008875 Chenopodium quinoa HOM05D005470 ORTHO05D006855 5.4e-85 318.5 262 61.5
ECA236G4489 Erigeron canadensis HOM05D005470 ORTHO05D006855 6.6e-83 311.6 230 67.4
CBR_g41676 Chara braunii HOM05D005470 ORTHO05D006855 3.7e-78 295.8 351 45.9
SEGI_26814 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 3.8e-70 269.2 235 58.3
vmacro15783 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 6.4e-70 268.5 214 63.6
MCO10G244 Micromonas commoda HOM05D005470 ORTHO05D006855 1.4e-69 267.3 336 45.5
CANSAT01G1736 Cannabis sativa HOM05D005470 ORTHO05D006855 1.9e-69 266.9 181 70.7
Nn1g07785 Nelumbo nucifera HOM05D005470 ORTHO05D006855 9.3e-69 264.6 197 64.0
Atru.chr5.2014 Acer truncatum HOM05D005470 ORTHO05D006855 9.6e-66 254.6 187 66.3
HanXRQChr16g0514371 Helianthus annuus HOM05D005470 ORTHO05D006855 6.0e-52 208.8 139 70.5
Cre02.g090150 Chlamydomonas reinhardtii HOM05D005470 ORTHO05D006855 3.9e-51 206.1 206 51.0
vmacro15781 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 6.7e-51 205.3 215 55.3
unitig_92.g28106 Utricularia gibba HOM05D005470 ORTHO05D006855 1.1e-48 198.0 128 73.4
Haze_26957 Corylus avellana HOM05D005470 ORTHO05D006855 7.6e-47 191.8 273 41.0
TAR636G1319 Trochodendron aralioides HOM05D005470 ORTHO05D006855 7.1e-45 185.3 161 60.2
vmacro23327 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 6.2e-41 172.2 192 53.6
Glyma.08G355700 Glycine max HOM05D005470 ORTHO05D006855 2.2e-38 163.7 290 39.3
unitig_92.g28105 Utricularia gibba HOM05D005470 ORTHO05D006855 1.1e-37 161.4 124 66.9
Cfa025604 Carpinus fangiana HOM05D005470 ORTHO05D006855 1.6e-36 157.5 296 35.5
arahy.Tifrunner.gnm1.ann1.K5YBAW Arachis hypogaea HOM05D005470 ORTHO05D006855 1.4e-27 127.9 121 58.7
Nn1g07786 Nelumbo nucifera HOM05D005470 ORTHO05D006855 2.9e-22 110.2 82 65.9
arahy.Tifrunner.gnm1.ann1.M1HUIQ Arachis hypogaea HOM05D005470 ORTHO05D006855 5.0e-22 109.4 121 53.7
CAN.G122.7 Capsicum annuum HOM05D005470 ORTHO05D006855 5.0e-22 109.4 113 49.6
MD05G1177900 Malus domestica HOM05D005470 ORTHO05D006855 8.5e-22 108.6 164 41.5
FAN15G3610 Fragaria x ananassa HOM05D005470 ORTHO05D006855 3.2e-21 106.7 76 67.1
SEGI_11949 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 6.1e-20 102.4 132 41.7
CSS0038259 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 2.3e-19 100.5 117 48.7
COL.COLO4_06654 Corchorus olitorius HOM05D005470 ORTHO05D006855 2.2e-17 94.0 68 61.8
arahy.Tifrunner.gnm1.ann1.GL96XS Arachis hypogaea HOM05D005470 ORTHO05D006855 1.8e-16 90.9 89 52.8
MD05G1178000 Malus domestica HOM05D005470 ORTHO05D006855 3.1e-16 90.1 66 62.1
CsaV3_1G001100 Cucumis sativus L. HOM05D005470 ORTHO05D006855 4.1e-16 89.7 55 80.0
arahy.Tifrunner.gnm1.ann1.HRPB72 Arachis hypogaea HOM05D005470 ORTHO05D006855 2.5e-13 80.5 83 51.8
Atru.chr5.2015 Acer truncatum HOM05D005470 ORTHO05D006855 9.4e-13 78.6 83 51.8
MELO3C014350.2 Cucumis melo HOM05D005470 ORTHO05D006855 2.1e-12 77.4 59 62.7
CANSAT54G2179 Cannabis sativa HOM05D005470 ORTHO05D006855 8.0e-12 75.5 116 42.2
arahy.Tifrunner.gnm1.ann1.6Q4MDY Arachis hypogaea HOM05D005470 ORTHO05D038880 3.8e-06 56.6 56 53.6


User provided reference genes

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