Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 1.0e-42 176.4 95 100.0
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 3.2e-28 128.3 86 79.1
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 2.0e-25 119.0 93 71.0
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 5.7e-25 117.5 95 70.5
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 5.7e-25 117.5 95 70.5
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 1.8e-23 112.5 95 66.3
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 1.8e-23 112.5 89 68.5
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 2.4e-23 112.1 83 71.1
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 5.3e-23 110.9 89 68.5
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 9.1e-23 110.2 93 63.4
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 1.2e-22 109.8 92 66.3
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 1.6e-22 109.4 85 70.6
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 2.0e-22 109.0 92 64.1
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 2.0e-22 109.0 92 65.2
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 2.7e-22 108.6 93 62.4
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 2.7e-22 108.6 93 62.4
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 4.5e-22 107.8 93 64.5
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 4.5e-22 107.8 93 64.5
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 5.9e-22 107.5 87 69.0
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 5.9e-22 107.5 82 70.7
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 5.9e-22 107.5 76 72.4
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 1.0e-21 106.7 89 65.2
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 1.0e-21 106.7 89 61.8
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 1.0e-21 106.7 89 65.2
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 1.7e-21 105.9 89 67.4
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.7e-21 105.9 93 61.3
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 1.7e-21 105.9 86 62.8
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 1.7e-21 105.9 92 62.0
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 2.9e-21 105.1 86 68.6
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.9e-21 105.1 85 67.1
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 3.8e-21 104.8 77 71.4
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 3.8e-21 104.8 92 64.1
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 3.8e-21 104.8 95 66.3
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 1.1e-20 103.2 92 64.1
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 1.9e-20 102.4 84 65.5
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 1.9e-20 102.4 95 63.2
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 1.9e-20 102.4 95 63.2
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 1.9e-20 102.4 95 56.8
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 2.5e-20 102.1 90 62.2
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 2.5e-20 102.1 93 60.2
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 3.2e-20 101.7 99 60.6
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 3.2e-20 101.7 79 68.4
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 4.2e-20 101.3 92 60.9
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 4.2e-20 101.3 99 60.6
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 4.2e-20 101.3 86 64.0
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 4.2e-20 101.3 81 66.7
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 4.2e-20 101.3 90 62.2
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 5.5e-20 100.9 82 68.3
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 7.2e-20 100.5 99 60.6
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 9.4e-20 100.1 84 65.5
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 1.2e-19 99.8 82 65.9
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.2e-19 99.8 84 65.5
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 1.2e-19 99.8 85 63.5
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 1.2e-19 99.8 82 65.9
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 1.2e-19 99.8 87 64.4
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 1.6e-19 99.4 93 58.1
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 2.7e-19 98.6 72 70.8
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 3.6e-19 98.2 75 69.3
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 3.6e-19 98.2 82 67.1
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 4.7e-19 97.8 82 67.1
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 6.1e-19 97.4 74 66.2
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 1.4e-18 96.3 86 62.8
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 1.4e-18 96.3 82 61.0
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.8e-18 95.9 90 61.1
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 2.3e-18 95.5 70 70.0
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 3.0e-18 95.1 82 63.4
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 4.0e-18 94.7 84 60.7
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 6.8e-18 94.0 89 56.2
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 1.2e-17 93.2 75 66.7
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.4e-17 91.7 89 55.1
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.4e-17 91.7 75 60.0
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 5.7e-17 90.9 74 63.5
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 1.7e-16 89.4 89 53.9
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 2.2e-16 89.0 65 69.2
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 2.2e-16 89.0 71 66.2
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 3.7e-16 88.2 60 73.3
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 4.8e-16 87.8 83 57.8
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 4.8e-16 87.8 74 62.2
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 1.4e-15 86.3 80 61.2
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 1.8e-15 85.9 91 57.1
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 1.8e-15 85.9 84 58.3
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 2.4e-15 85.5 80 61.2
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 2.4e-15 85.5 90 55.6
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 4.1e-15 84.7 80 60.0
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 5.4e-15 84.3 80 60.0
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 7.0e-15 84.0 87 58.6
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 9.1e-15 83.6 80 60.0
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 9.1e-15 83.6 80 60.0
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 9.1e-15 83.6 80 60.0
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 9.1e-15 83.6 80 60.0
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 9.1e-15 83.6 80 60.0
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 1.2e-14 83.2 74 62.2
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 1.2e-14 83.2 80 58.8
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 2.7e-14 82.0 85 51.8
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 1.7e-13 79.3 88 50.0
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.9e-12 75.9 67 59.7
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 2.5e-12 75.5 98 48.0
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 4.2e-12 74.7 60 68.3
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 2.3e-10 68.9 54 63.0
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 3.0e-10 68.6 51 68.6
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 8.8e-10 67.0 68 52.9
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 1.5e-09 66.2 43 79.1
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 1.5e-09 66.2 57 61.4
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 4.4e-09 64.7 43 76.7
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 2.8e-08 62.0 41 73.2
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 4.5e-06 54.7 72 41.7


User provided reference genes

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