Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015427.1 Olea europaea HOM05D000647 ORTHO05D038897 4.1e-33 144.1 68 100.0
Oeu052071.1 Olea europaea HOM05D000647 ORTHO05D000485 4.1e-17 90.9 111 48.6
RcHm_v2.0_Chr6g0286901 Rosa chinensis HOM05D000647 ORTHO05D000485 1.6e-13 79.0 111 45.0
FAN20G1045 Fragaria x ananassa HOM05D000647 ORTHO05D000485 8.0e-13 76.6 111 44.1
FAN27G1324 Fragaria x ananassa HOM05D000647 ORTHO05D000485 1.0e-12 76.3 93 47.3
Haze_24690 Corylus avellana HOM05D000647 ORTHO05D000485 3.0e-12 74.7 108 40.7
CiPaw.03G269800 Carya illinoinensis HOM05D000647 ORTHO05D000485 4.0e-12 74.3 108 42.6
Prupe.8G216700 Prunus persica HOM05D000647 ORTHO05D000485 5.2e-12 73.9 109 44.0
QL09p041145 Quercus lobata HOM05D000647 ORTHO05D000485 6.8e-12 73.6 108 42.6
MSTRG.21468 Avicennia marina HOM05D000647 ORTHO05D000485 2.0e-11 72.0 108 40.7
Cfa019644 Carpinus fangiana HOM05D000647 ORTHO05D000485 2.6e-11 71.6 107 40.2
FAN15G2101 Fragaria x ananassa HOM05D000647 ORTHO05D000485 9.8e-11 69.7 111 42.3
MD00G1060800 Malus domestica HOM05D000647 ORTHO05D000485 1.7e-10 68.9 108 38.9
Thecc.01G252100 Theobroma cacao HOM05D000647 ORTHO05D000485 1.7e-10 68.9 108 40.7
Duzib211G0046 Durio zibethinus HOM05D000647 ORTHO05D000485 4.8e-10 67.4 108 40.7
Ciclev10021795m.g Citrus clementina HOM05D000647 ORTHO05D000485 8.3e-10 66.6 109 39.4
TWI12G1278 Tripterygium wilfordii HOM05D000647 ORTHO05D000485 8.3e-10 66.6 109 37.6
Potri.002G257700 Populus trichocarpa HOM05D000647 ORTHO05D000485 1.8e-09 65.5 108 38.9
Aqoxy239s002 Aquilegia oxysepala HOM05D000647 ORTHO05D000485 7.0e-09 63.5 109 35.8
Aqoxy2G03738 Aquilegia oxysepala HOM05D000647 ORTHO05D000485 7.0e-09 63.5 109 35.8
Atru.chr5.1816 Acer truncatum HOM05D000647 ORTHO05D000485 9.1e-09 63.2 109 35.8
Sabra02G0196100 Salix brachista HOM05D000647 ORTHO05D000485 9.1e-09 63.2 108 38.0
Manes.12G035700 Manihot esculenta HOM05D000647 ORTHO05D000485 1.2e-08 62.8 108 35.2
COL.COLO4_10586 Corchorus olitorius HOM05D000647 ORTHO05D000485 2.0e-08 62.0 110 37.3
FvH4_2g20720 Fragaria vesca HOM05D000647 ORTHO05D000485 2.7e-08 61.6 110 39.1
Cc01_g17910 Coffea canephora HOM05D000647 ORTHO05D000485 4.5e-08 60.8 106 34.9
MBI10_g30719_MAGBIO Magnolia biondii HOM05D000647 ORTHO05D000485 7.7e-08 60.1 107 36.4
MBI10_g44040_MAGBIO Magnolia biondii HOM05D000647 ORTHO05D000485 7.7e-08 60.1 107 36.4
Duzib138G0594 Durio zibethinus HOM05D000647 ORTHO05D000485 1.3e-07 59.3 108 37.0
Gohir.A07G150800 Gossypium hirsutum HOM05D000647 ORTHO05D000485 2.9e-07 58.2 108 38.0
Gohir.D07G157400 Gossypium hirsutum HOM05D000647 ORTHO05D000485 2.9e-07 58.2 108 38.0
vmacro14804 Vaccinium macrocarpon HOM05D000647 ORTHO05D000485 2.9e-07 58.2 110 35.5
CANSAT01G0164 Cannabis sativa HOM05D000647 ORTHO05D000485 3.8e-07 57.8 107 35.5
Gorai.001G180400 Gossypium raimondii HOM05D000647 ORTHO05D000485 5.0e-07 57.4 108 38.0
Sed0004748 Sechium edule HOM05D000647 ORTHO05D000485 5.0e-07 57.4 109 34.9
Solyc09g090600.3 Solanum lycopersicum HOM05D000647 ORTHO05D000485 6.6e-07 57.0 109 33.0
arahy.Tifrunner.gnm1.ann1.GYY3NL Arachis hypogaea HOM05D000647 ORTHO05D038897 8.6e-07 56.6 67 46.3
Rhsim01G0261100 Rhododendron simsii HOM05D000647 ORTHO05D000485 8.6e-07 56.6 116 33.6
CANSAT78G0104 Cannabis sativa HOM05D000647 ORTHO05D000485 1.1e-06 56.2 109 33.0
Nn1g02937 Nelumbo nucifera HOM05D000647 ORTHO05D000485 1.1e-06 56.2 110 34.5
Nitab4.5_0001051g0060 Nicotiana tabacum HOM05D000647 ORTHO05D000485 1.5e-06 55.8 108 33.3
Potri.010G066500 Populus trichocarpa HOM05D000647 ORTHO05D000485 1.5e-06 55.8 109 33.9
TAR362G0070 Trochodendron aralioides HOM05D000647 ORTHO05D000485 1.5e-06 55.8 109 32.1
PGSC0003DMG400017152 Solanum tuberosum HOM05D000647 ORTHO05D000485 2.5e-06 55.1 109 33.0
Dinv29810 Davidia involucrata HOM05D000647 ORTHO05D000485 3.3e-06 54.7 108 33.3
Peaxi162Scf00033g03015 Petunia axillaris HOM05D000647 ORTHO05D000485 3.3e-06 54.7 109 33.0
Hma1.2p1_0112F.1_g054640 Hydrangea macrophylla HOM05D000647 ORTHO05D000485 5.5e-06 53.9 108 33.3
Lsat_1_v5_gn_6_66480 Lactuca sativa HOM05D000647 ORTHO05D000485 5.5e-06 53.9 107 32.7
Lj2C1144G7 Lonicera japonica HOM05D000647 ORTHO05D000485 5.5e-06 53.9 102 35.3
Phvul.001G164000 Phaseolus vulgaris HOM05D000647 ORTHO05D000485 5.5e-06 53.9 102 37.3
GSVIVG01028404001 Vitis vinifera HOM05D000647 ORTHO05D000485 7.2e-06 53.5 110 34.5
Manes.15G045000 Manihot esculenta HOM05D000647 ORTHO05D000485 9.5e-06 53.1 108 32.4
Sabra10G0040900 Salix brachista HOM05D000647 ORTHO05D000485 9.5e-06 53.1 106 34.0


User provided reference genes

Program Settings