Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015328.1 Olea europaea HOM05D004714 ORTHO05D005614 1.5e-39 165.6 79 100.0
Oeu031756.1 Olea europaea HOM05D004714 ORTHO05D005614 6.0e-28 127.1 75 81.3
MSTRG.10455 Avicennia marina HOM05D004714 ORTHO05D005614 8.7e-27 123.2 75 78.7
CSS0001667 Camellia sinensis var. sinensis HOM05D004714 ORTHO05D005614 1.5e-26 122.5 73 83.6
Sc24g0003530 Simmondsia chinensis HOM05D004714 ORTHO05D005614 1.9e-26 122.1 75 77.3
BraA03t10598Z Brassica rapa HOM05D004714 ORTHO05D005614 2.5e-26 121.7 75 77.3
BcaC04g19980 Brassica carinata HOM05D004714 ORTHO05D005614 4.3e-26 120.9 75 76.0
C09p49140 Brassica napus HOM05D004714 ORTHO05D005614 4.3e-26 120.9 75 76.0
BolC9t57763H Brassica oleracea HOM05D004714 ORTHO05D005614 4.3e-26 120.9 75 76.0
BraA10t43556Z Brassica rapa HOM05D004714 ORTHO05D005614 4.3e-26 120.9 75 76.0
CARHR271100 Cardamine hirsuta HOM05D004714 ORTHO05D005614 5.6e-26 120.6 75 76.0
Lj7C659G12 Lonicera japonica HOM05D004714 ORTHO05D005614 5.6e-26 120.6 75 77.3
SGA_v2.0_scaffold63G21841 Striga asiatica HOM05D004714 ORTHO05D005614 5.6e-26 120.6 75 76.0
A10p14730 Brassica napus HOM05D004714 ORTHO05D005614 9.6e-26 119.8 75 74.7
Lj7A660G39 Lonicera japonica HOM05D004714 ORTHO05D005614 9.6e-26 119.8 75 76.0
unitig_8.g4678 Utricularia gibba HOM05D004714 ORTHO05D005614 9.6e-26 119.8 75 76.0
PSO541G2874 Papaver somniferum HOM05D004714 ORTHO05D005614 1.2e-25 119.4 75 76.0
PSO675G7537 Papaver somniferum HOM05D004714 ORTHO05D005614 1.6e-25 119.0 75 76.0
Cc05_g03940 Coffea canephora HOM05D004714 ORTHO05D005614 2.1e-25 118.6 75 74.7
Thhalv10014276m.g Eutrema salsugineum HOM05D004714 ORTHO05D005614 2.8e-25 118.2 75 74.7
AL8G33270 Arabidopsis lyrata HOM05D004714 ORTHO05D005614 3.6e-25 117.9 75 74.7
AT5G57300 Arabidopsis thaliana HOM05D004714 ORTHO05D005614 3.6e-25 117.9 75 74.7
BcaB08g36090 Brassica carinata HOM05D004714 ORTHO05D005614 3.6e-25 117.9 75 74.7
Migut.L01902 Erythranthe guttata HOM05D004714 ORTHO05D005614 3.6e-25 117.9 75 76.0
Peaxi162Scf00907g00027 Petunia axillaris HOM05D004714 ORTHO05D005614 3.6e-25 117.9 75 74.7
Potri.018G088400 Populus trichocarpa HOM05D004714 ORTHO05D005614 3.6e-25 117.9 76 75.0
Sp6g19030 Schrenkiella parvula HOM05D004714 ORTHO05D005614 3.6e-25 117.9 75 74.7
Eucgr.I01084 Eucalyptus grandis HOM05D004714 ORTHO05D005614 4.7e-25 117.5 66 84.8
QL08p018134 Quercus lobata HOM05D004714 ORTHO05D005614 6.2e-25 117.1 75 73.3
Actinidia25713 Actinidia chinensis HOM05D004714 ORTHO05D005614 8.1e-25 116.7 73 79.5
A03p12900 Brassica napus HOM05D004714 ORTHO05D005614 8.1e-25 116.7 75 73.3
C03p15050 Brassica napus HOM05D004714 ORTHO05D005614 8.1e-25 116.7 75 73.3
BolC3t13947H Brassica oleracea HOM05D004714 ORTHO05D005614 8.1e-25 116.7 75 73.3
Lsat_1_v5_gn_8_69561 Lactuca sativa HOM05D004410 ORTHO05D005614 8.1e-25 116.7 75 74.7
EL10Ac6g14222 Beta vulgaris HOM05D004714 ORTHO05D005614 1.1e-24 116.3 75 74.7
C02p14380 Brassica napus HOM05D004714 ORTHO05D005614 1.1e-24 116.3 70 81.4
BolC2t07562H Brassica oleracea HOM05D004714 ORTHO05D005614 1.1e-24 116.3 70 81.4
Cpa.g.sc173.21 Carica papaya HOM05D004714 ORTHO05D005614 1.1e-24 116.3 76 73.7
CiPaw.08G034200 Carya illinoinensis HOM05D004714 ORTHO05D005614 1.1e-24 116.3 75 74.7
BcaB01g04462 Brassica carinata HOM05D004714 ORTHO05D005614 1.4e-24 115.9 65 83.1
FAN07G0359 Fragaria x ananassa HOM05D004714 ORTHO05D005614 1.4e-24 115.9 75 72.0
HanXRQChr06g0179551 Helianthus annuus HOM05D004714 ORTHO05D005614 1.4e-24 115.9 75 74.7
BcaC03g14165 Brassica carinata HOM05D004714 ORTHO05D005614 1.8e-24 115.5 65 83.1
Aa31LG3G13180 Aethionema arabicum HOM05D004714 ORTHO05D005614 2.4e-24 115.2 75 73.3
Aqoxy7G03018 Aquilegia oxysepala HOM05D004714 ORTHO05D005614 2.4e-24 115.2 75 74.7
Aqoxy7G03753 Aquilegia oxysepala HOM05D004714 ORTHO05D005614 2.4e-24 115.2 75 74.7
Dinv25399 Davidia involucrata HOM05D004714 ORTHO05D005614 2.4e-24 115.2 66 80.3
MBI07_g09259_MAGBIO Magnolia biondii HOM05D004714 ORTHO05D005614 2.4e-24 115.2 75 74.7
Nn4g22433 Nelumbo nucifera HOM05D004714 ORTHO05D005614 2.4e-24 115.2 75 73.3
Carub.0008s1781 Capsella rubella HOM05D004714 ORTHO05D005614 3.1e-24 114.8 75 73.3
AUR62014206 Chenopodium quinoa HOM05D004714 ORTHO05D005614 3.1e-24 114.8 65 86.2
CAN.G992.24 Capsicum annuum HOM05D004714 ORTHO05D005614 4.0e-24 114.4 75 72.0
COL.COLO4_36489 Corchorus olitorius HOM05D004714 ORTHO05D005614 4.0e-24 114.4 75 72.0
FvH4_4g07660 Fragaria vesca HOM05D004714 ORTHO05D005614 5.2e-24 114.0 75 70.7
FAN12G0160 Fragaria x ananassa HOM05D004714 ORTHO05D005614 5.2e-24 114.0 75 70.7
AUR62041230 Chenopodium quinoa HOM05D004714 ORTHO05D005614 6.9e-24 113.6 65 84.6
Prupe.1G079700 Prunus persica HOM05D004714 ORTHO05D005614 6.9e-24 113.6 76 71.1
THA.LOC104802911 Tarenaya hassleriana HOM05D004714 ORTHO05D005614 6.9e-24 113.6 75 72.0
Haze_14511 Corylus avellana HOM05D004714 ORTHO05D005614 9.0e-24 113.2 75 70.7
FAN17G0676 Fragaria x ananassa HOM05D004714 ORTHO05D005614 9.0e-24 113.2 75 70.7
CSS0022683 Camellia sinensis var. sinensis HOM05D004714 ORTHO05D005614 1.2e-23 112.8 65 83.1
QL11p004848 Quercus lobata HOM05D004714 ORTHO05D005614 1.2e-23 112.8 76 71.1
Sabra18G0076900 Salix brachista HOM05D004714 ORTHO05D005614 1.2e-23 112.8 65 80.0
SalBow4G0166 Salvia bowleyana HOM05D004714 ORTHO05D005614 1.2e-23 112.8 75 72.0
Sopen01g033030 Solanum pennellii HOM05D004714 ORTHO05D005614 1.2e-23 112.8 75 72.0
Atru.chr7.820 Acer truncatum HOM05D004714 ORTHO05D005614 1.5e-23 112.5 75 70.7
Manes.14G158566 Manihot esculenta HOM05D004714 ORTHO05D005614 1.5e-23 112.5 75 70.7
Rhsim05G0122400 Rhododendron simsii HOM05D004714 ORTHO05D005614 1.5e-23 112.5 66 84.8
TWI32G1166 Tripterygium wilfordii HOM05D004714 ORTHO05D005614 1.5e-23 112.5 75 73.3
ECA236G1620 Erigeron canadensis HOM05D004714 ORTHO05D005614 2.0e-23 112.1 75 72.0
MD03G1036000 Malus domestica HOM05D004714 ORTHO05D005614 2.0e-23 112.1 75 69.3
SEGI_34543 Sequoiadendron giganteum HOM05D004714 ORTHO05D005614 2.0e-23 112.1 66 81.8
Gohir.A08G018200 Gossypium hirsutum HOM05D004714 ORTHO05D005614 2.6e-23 111.7 76 68.4
RcHm_v2.0_Chr4g0400411 Rosa chinensis HOM05D004714 ORTHO05D005614 2.6e-23 111.7 75 69.3
Solyc01g081470.4 Solanum lycopersicum HOM05D004714 ORTHO05D005614 2.6e-23 111.7 75 70.7
TAR623G1076 Trochodendron aralioides HOM05D004714 ORTHO05D005614 2.6e-23 111.7 75 73.3
HanXRQChr05g0138351 Helianthus annuus HOM05D004714 ORTHO05D005614 3.4e-23 111.3 75 72.0
RcHm_v2.0_Chr4g0400471 Rosa chinensis HOM05D004714 ORTHO05D005614 3.4e-23 111.3 75 70.7
Duzib168G0788 Durio zibethinus HOM05D004714 ORTHO05D005614 4.4e-23 110.9 65 81.5
Gohir.D08G028800 Gossypium hirsutum HOM05D004714 ORTHO05D005614 4.4e-23 110.9 75 68.0
Gorai.004G025900 Gossypium raimondii HOM05D004714 ORTHO05D005614 4.4e-23 110.9 75 68.0
SalBow4G0136 Salvia bowleyana HOM05D004714 ORTHO05D005614 4.4e-23 110.9 75 70.7
HPP92_017314 Vanilla planifolia HOM05D004714 ORTHO05D005614 4.4e-23 110.9 66 78.8
Duzib160G0192 Durio zibethinus HOM05D004714 ORTHO05D005614 5.8e-23 110.5 76 72.4
PGSC0003DMG400031122 Solanum tuberosum HOM05D004714 ORTHO05D005614 5.8e-23 110.5 75 72.0
ATR0686G131 Amborella trichopoda HOM05D004714 ORTHO05D005614 7.6e-23 110.2 75 70.7
CANSAT11G1559 Cannabis sativa HOM05D004714 ORTHO05D005614 7.6e-23 110.2 75 70.7
DCAR_002998 Daucus carota HOM05D004714 ORTHO05D005614 7.6e-23 110.2 75 69.3
PGR142G4249 Punica granatum HOM05D004714 ORTHO05D005614 7.6e-23 110.2 66 77.3
Nitab4.5_0006785g0020 Nicotiana tabacum HOM05D004714 ORTHO05D005614 9.9e-23 109.8 75 69.3
ClCG03G002280 Citrullus lanatus HOM05D004714 ORTHO05D005614 1.3e-22 109.4 65 80.0
vmacro19765 Vaccinium macrocarpon HOM05D004714 ORTHO05D005614 1.3e-22 109.4 76 76.3
MD13G1245000 Malus domestica HOM05D004714 ORTHO05D005614 2.2e-22 108.6 75 66.7
Ciclev10009101m.g Citrus clementina HOM05D004714 ORTHO05D005614 2.9e-22 108.2 75 73.3
CsaV3_1G012970 Cucumis sativus L. HOM05D004714 ORTHO05D005614 2.9e-22 108.2 66 78.8
Duzib168G1985 Durio zibethinus HOM05D004714 ORTHO05D005614 2.9e-22 108.2 75 70.7
Medtr4g009880 Medicago truncatula HOM05D004714 ORTHO05D005614 3.8e-22 107.8 76 65.8
Nitab4.5_0000792g0180 Nicotiana tabacum HOM05D004714 ORTHO05D005614 3.8e-22 107.8 65 78.5
RcHm_v2.0_Chr4g0400331 Rosa chinensis HOM05D004714 ORTHO05D005614 3.8e-22 107.8 75 68.0
GSVIVG01024342001 Vitis vinifera HOM05D004714 ORTHO05D005614 3.8e-22 107.8 75 68.0
Nn3g18335 Nelumbo nucifera HOM05D004714 ORTHO05D005614 4.9e-22 107.5 75 70.7
Zm00001eb362110 Zea mays HOM05D004714 ORTHO05D005614 4.9e-22 107.5 75 69.3
Zm00001eb398140 Zea mays HOM05D004714 ORTHO05D005614 4.9e-22 107.5 75 69.3
BcaB05g22335 Brassica carinata HOM05D004714 ORTHO05D005614 6.4e-22 107.1 62 82.3
MELO3C005041.2 Cucumis melo HOM05D004714 ORTHO05D005614 6.4e-22 107.1 66 78.8
Os01g0976600 Oryza sativa ssp. japonica HOM05D004714 ORTHO05D005614 6.4e-22 107.1 75 69.3
Rhsim08G0112000 Rhododendron simsii HOM05D004714 ORTHO05D005614 6.4e-22 107.1 75 73.3
Sed0009644 Sechium edule HOM05D004714 ORTHO05D005614 8.4e-22 106.7 66 77.3
TWI34G0504 Tripterygium wilfordii HOM05D004714 ORTHO05D005614 1.4e-21 105.9 75 70.7
Pp3c3_21690 Physcomitrium patens HOM05D004714 ORTHO05D005614 1.9e-21 105.5 66 74.2
Thecc.09G180100 Theobroma cacao HOM05D004714 ORTHO05D005614 1.9e-21 105.5 75 68.0
Ca_12516_v3 Cicer arietinum L. HOM05D004714 ORTHO05D005614 2.4e-21 105.1 75 64.0
Ca_12517_v3 Cicer arietinum L. HOM05D004714 ORTHO05D005614 2.4e-21 105.1 75 64.0
Psat7g257720 Pisum sativum HOM05D004714 ORTHO05D005614 2.4e-21 105.1 75 64.0
Glyma.07G028400 Glycine max HOM05D004714 ORTHO05D005614 5.4e-21 104.0 75 62.7
RcHm_v2.0_Chr4g0400601 Rosa chinensis HOM05D004714 ORTHO05D005614 5.4e-21 104.0 74 66.2
Glyma.08G214400 Glycine max HOM05D004714 ORTHO05D005614 7.1e-21 103.6 75 62.7
Phvul.010G157500 Phaseolus vulgaris HOM05D004714 ORTHO05D005614 7.1e-21 103.6 73 67.1
SHI02880 Sapria himalayana HOM05D004714 ORTHO05D005614 7.1e-21 103.6 65 73.8
Lalb_Chr01g0012111 Lupinus albus HOM05D004714 ORTHO05D005614 9.3e-21 103.2 75 64.0
QL05p067644 Quercus lobata HOM05D004714 ORTHO05D005614 1.2e-20 102.8 65 76.9
Lj3g0005475 Lotus japonicus HOM05D004714 ORTHO05D005614 2.7e-20 101.7 76 63.2
Thecc.09G241900 Theobroma cacao HOM05D004714 ORTHO05D005614 2.7e-20 101.7 76 67.1
VMungo0331G1132 Vigna mungo HOM05D004714 ORTHO05D005614 2.7e-20 101.7 75 61.3
TPR.G38676 Trifolium pratense HOM05D004714 ORTHO05D005614 3.5e-20 101.3 76 61.8
arahy.Tifrunner.gnm1.ann1.ZK581Z Arachis hypogaea HOM05D004714 ORTHO05D005614 4.6e-20 100.9 75 61.3
arahy.Tifrunner.gnm1.ann1.72XQC0 Arachis hypogaea HOM05D004714 ORTHO05D005614 7.8e-20 100.1 75 61.3
AagrBONN_evm.TU.Sc2ySwM_117.468 Anthoceros agrestis HOM05D004714 ORTHO05D005614 1.0e-19 99.8 66 69.7
CDE02G3847 Ceratophyllum demersum HOM05D004714 ORTHO05D005614 1.3e-19 99.4 75 61.3
Dinv25435 Davidia involucrata HOM05D004714 ORTHO05D005614 7.3e-18 93.6 55 80.0
Mapoly0052s0093 Marchantia polymorpha HOM05D004714 ORTHO05D005614 9.6e-18 93.2 75 61.3
SMO115G0141 Selaginella moellendorffii HOM05D004714 ORTHO05D005614 1.1e-16 89.7 95 51.6
DCAR_003032 Daucus carota HOM05D004714 ORTHO05D005614 2.2e-14 82.0 59 64.4
COL.COLO4_25457 Corchorus olitorius HOM05D004714 ORTHO05D005614 3.8e-14 81.3 59 64.4
SGA_v2.0_scaffold905G53712 Striga asiatica HOM05D004714 ORTHO05D005614 3.2e-13 78.2 51 68.6
CBR_g3967 Chara braunii HOM05D004714 ORTHO05D005614 5.4e-13 77.4 66 53.0
A02p08610 Brassica napus HOM05D004714 ORTHO05D005614 2.7e-12 75.1 72 54.2
Zm00001eb302180 Zea mays HOM05D004714 ORTHO05D005614 4.6e-12 74.3 53 66.0
PRCOL_00006789 Prasinoderma coloniale HOM05D004714 ORTHO05D005614 1.1e-10 69.7 75 52.0
Cre05.g245450 Chlamydomonas reinhardtii HOM05D004714 ORTHO05D005614 4.0e-08 61.2 67 49.3
Haze_26398 Corylus avellana HOM05D004714 ORTHO05D005614 4.0e-08 61.2 76 40.8
RcHm_v2.0_Chr4g0400651 Rosa chinensis HOM05D004714 ORTHO05D005614 3.8e-06 54.7 35 71.4
MSTRG.2407 Avicennia marina HOM05D005748 ORTHO05D007123 6.4e-06 53.9 61 39.3


User provided reference genes

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