Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015272.1 Olea europaea HOM05D003079 ORTHO05D003461 2.3e-70 268.9 145 100.0
Oeu052026.1 Olea europaea HOM05D003079 ORTHO05D003461 2.9e-36 155.6 119 70.6
Nitab4.5_0002216g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 4.5e-29 131.7 142 53.5
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 6.4e-28 127.9 142 53.5
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 1.4e-27 126.7 135 56.3
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 3.2e-27 125.6 137 50.4
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 4.2e-27 125.2 152 50.0
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 5.5e-27 124.8 154 50.6
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 3.5e-26 122.1 152 50.7
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 1.0e-25 120.6 133 51.1
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 1.5e-24 116.7 140 49.3
Oeu006261.2 Olea europaea HOM05D003079 ORTHO05D003461 4.3e-24 115.2 139 47.5
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.6e-23 113.2 138 47.8
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 8.2e-23 110.9 153 45.8
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 5.3e-22 108.2 146 49.3
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 9.0e-22 107.5 150 46.7
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.2e-21 107.1 131 46.6
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 1.5e-21 106.7 132 47.7
Solyc07g066170.4 Solanum lycopersicum HOM05D003079 ORTHO05D003461 2.0e-21 106.3 145 47.6
Oeu052884.2 Olea europaea HOM05D003079 ORTHO05D003461 1.3e-20 103.6 143 44.8
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 1.7e-20 103.2 131 45.0
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 2.2e-20 102.8 136 47.1
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 1.1e-19 100.5 132 47.7
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 1.9e-19 99.8 137 44.5
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 3.2e-19 99.0 135 45.2
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 7.1e-19 97.8 154 42.9
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 9.3e-19 97.4 138 41.3
SGA_v2.0_scaffold186G40233 Striga asiatica HOM05D003079 ORTHO05D003461 3.5e-18 95.5 112 50.0
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 6.0e-18 94.7 135 43.0
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 7.9e-18 94.4 147 37.4
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 1.0e-17 94.0 137 44.5
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 1.3e-17 93.6 137 41.6
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 1.8e-17 93.2 132 43.2
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 2.3e-17 92.8 132 43.2
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 6.7e-17 91.3 143 38.5
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 1.1e-16 90.5 144 44.4
SGA_v2.0_scaffold7G03549 Striga asiatica HOM05D003079 ORTHO05D003461 1.5e-16 90.1 108 47.2
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 1.9e-16 89.7 134 42.5
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 1.9e-16 89.7 134 40.3
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 2.5e-16 89.4 134 40.3
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 4.3e-16 88.6 129 44.2
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 4.3e-16 88.6 143 42.0
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 5.7e-16 88.2 128 41.4
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 7.4e-16 87.8 144 39.6
Migut.M01581 Erythranthe guttata HOM05D003079 ORTHO05D003461 9.7e-16 87.4 138 43.5
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 1.6e-15 86.7 144 39.6
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 2.2e-15 86.3 132 42.4
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 2.2e-15 86.3 138 42.0
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 3.7e-15 85.5 133 40.6
Peaxi162Scf00006g00810 Petunia axillaris HOM05D003079 ORTHO05D003461 3.7e-15 85.5 89 53.9
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 4.8e-15 85.1 136 42.6
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 4.8e-15 85.1 137 36.5
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 1.1e-14 84.0 146 41.1
TAR626G1036 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.1e-14 84.0 135 38.5
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 1.4e-14 83.6 132 40.2
DCAR_013756 Daucus carota HOM05D003079 ORTHO05D003461 1.4e-14 83.6 136 39.7
SalBow8G1693 Salvia bowleyana HOM05D003079 ORTHO05D003461 1.4e-14 83.6 88 54.5
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.8e-14 83.2 141 40.4
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.8e-14 83.2 141 40.4
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 1.8e-14 83.2 139 38.8
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 2.4e-14 82.8 107 48.6
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 2.4e-14 82.8 137 35.8
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 3.1e-14 82.4 119 46.2
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 3.1e-14 82.4 107 48.6
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 3.1e-14 82.4 112 45.5
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 4.1e-14 82.0 137 38.7
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 4.1e-14 82.0 137 38.7
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 5.3e-14 81.6 141 39.7
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 6.9e-14 81.3 103 44.7
Aqoxy7G02327 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 9.0e-14 80.9 131 35.9
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 9.0e-14 80.9 135 40.7
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 9.0e-14 80.9 135 40.7
MSTRG.14525 Avicennia marina HOM05D003079 ORTHO05D003461 9.0e-14 80.9 134 38.1
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 9.0e-14 80.9 144 36.8
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 1.2e-13 80.5 91 53.8
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.2e-13 80.5 135 34.8
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 1.2e-13 80.5 132 40.9
Sed0005838 Sechium edule HOM05D003079 ORTHO05D003461 1.2e-13 80.5 147 36.7
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 2.6e-13 79.3 141 37.6
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 3.4e-13 79.0 144 38.2
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 3.4e-13 79.0 143 39.2
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 4.5e-13 78.6 137 34.3
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 4.5e-13 78.6 137 34.3
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 4.5e-13 78.6 139 36.0
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 5.9e-13 78.2 131 40.5
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 7.7e-13 77.8 89 53.9
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 7.7e-13 77.8 145 38.6
Lalb_Chr04g0259441 Lupinus albus HOM05D003079 ORTHO05D003461 1.0e-12 77.4 147 36.7
DCAR_017612 Daucus carota HOM05D003079 ORTHO05D003461 1.7e-12 76.6 137 38.0
ATR0751G103 Amborella trichopoda HOM05D003079 ORTHO05D003461 2.2e-12 76.3 132 37.1
Actinidia30351 Actinidia chinensis HOM05D003079 ORTHO05D003461 2.9e-12 75.9 101 46.5
COL.COLO4_07790 Corchorus olitorius HOM05D003079 ORTHO05D003461 8.5e-12 74.3 96 44.8
PGR083G0768 Punica granatum HOM05D003079 ORTHO05D003461 8.5e-12 74.3 146 40.4
Carub.0007s1447 Capsella rubella HOM05D003079 ORTHO05D003461 1.1e-11 73.9 129 38.0
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.1e-11 73.9 134 40.3
Migut.H01709 Erythranthe guttata HOM05D003079 ORTHO05D003461 4.2e-11 72.0 133 37.6
Sp7g24370 Schrenkiella parvula HOM05D003079 ORTHO05D003461 5.5e-11 71.6 133 38.3
AL7G26490 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 7.2e-11 71.2 130 39.2
AT4G26455 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 7.2e-11 71.2 129 37.2
CARHR234020 Cardamine hirsuta HOM05D003079 ORTHO05D003461 7.2e-11 71.2 118 39.8
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 1.2e-10 70.5 113 40.7
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.6e-10 70.1 134 39.6
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.6e-10 70.1 134 39.6
BraA01t01726Z Brassica rapa HOM05D003079 ORTHO05D003461 3.6e-10 68.9 121 36.4
AUR62043120 Chenopodium quinoa HOM05D003079 ORTHO05D003461 3.6e-10 68.9 142 34.5
PGSC0003DMG400029886 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.4e-09 67.0 78 44.9
BcaC09g50710 Brassica carinata HOM05D003079 ORTHO05D003461 1.8e-09 66.6 121 35.5
A01p17700 Brassica napus HOM05D003079 ORTHO05D003461 1.8e-09 66.6 121 35.5
C01p22370 Brassica napus HOM05D003079 ORTHO05D003461 1.8e-09 66.6 121 35.5
BolC1t02168H Brassica oleracea HOM05D003079 ORTHO05D003461 1.8e-09 66.6 121 35.5
Aqoxy4G02267 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 2.3e-09 66.2 141 34.8
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 3.9e-09 65.5 137 33.6
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 5.1e-09 65.1 112 42.0
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 5.1e-09 65.1 136 34.6
Sp6g18060 Schrenkiella parvula HOM05D003079 ORTHO05D003461 6.7e-09 64.7 129 34.9
vmacro09798 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 6.7e-09 64.7 131 35.1
Carub.0008s1653 Capsella rubella HOM05D003079 ORTHO05D003461 8.8e-09 64.3 143 35.7
Rhsim04G0008000 Rhododendron simsii HOM05D003079 ORTHO05D003461 8.8e-09 64.3 78 51.3
CARHR269610 Cardamine hirsuta HOM05D003079 ORTHO05D003461 1.1e-08 63.9 111 37.8
Thhalv10013313m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 1.1e-08 63.9 130 36.2
Thhalv10024990m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 1.1e-08 63.9 135 34.8
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 1.1e-08 63.9 98 44.9
AT5G56210 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 1.5e-08 63.5 128 36.7
HanXRQChr05g0160341 Helianthus annuus HOM05D003079 ORTHO05D003461 2.5e-08 62.8 114 32.5
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 2.5e-08 62.8 145 35.2
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 7.4e-08 61.2 129 33.3
CiPaw.12G142900 Carya illinoinensis HOM05D003079 ORTHO05D003461 7.4e-08 61.2 123 36.6
AL8G31840 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 1.3e-07 60.5 128 38.3
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 1.7e-07 60.1 125 37.6
Os08g0497900 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 2.2e-07 59.7 123 35.0
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 2.8e-07 59.3 125 36.0
BcaNung02417 Brassica carinata HOM05D003079 ORTHO05D003461 4.8e-07 58.5 126 34.9
Os09g0481300 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 8.2e-07 57.8 134 30.6
PGSC0003DMG400028881 Solanum tuberosum HOM05D003079 ORTHO05D003461 8.2e-07 57.8 89 46.1
Actinidia03676 Actinidia chinensis HOM05D003079 ORTHO05D003461 1.1e-06 57.4 78 44.9
Medtr8g070940 Medicago truncatula HOM05D003079 ORTHO05D003461 4.1e-06 55.5 131 26.7
Lalb_Chr18g0048661 Lupinus albus HOM05D003079 ORTHO05D003461 5.3e-06 55.1 96 33.3
Rhsim06G0235200 Rhododendron simsii HOM05D003079 ORTHO05D003461 5.3e-06 55.1 113 35.4


User provided reference genes

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