Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015239.1 Olea europaea HOM05D008797 ORTHO05D010692 0.0e+00 1854.3 962 100.0
Dinv30575 Davidia involucrata HOM05D008797 ORTHO05D010692 0.0e+00 1218.0 1035 64.3
Hma1.2p1_0317F.1_g123660 Hydrangea macrophylla HOM05D008797 ORTHO05D010692 0.0e+00 1199.9 1035 62.4
GSVIVG01017273001 Vitis vinifera HOM05D008797 ORTHO05D010692 0.0e+00 1196.8 1035 62.7
TAR626G1961 Trochodendron aralioides HOM05D008797 ORTHO05D010692 0.0e+00 1196.4 1035 61.3
Cfa001998 Carpinus fangiana HOM05D008797 ORTHO05D010692 0.0e+00 1170.2 1035 61.2
QL05p027942 Quercus lobata HOM05D008797 ORTHO05D010692 0.0e+00 1146.3 1032 60.9
Haze_16519 Corylus avellana HOM05D008797 ORTHO05D010692 0.0e+00 1142.1 1011 61.0
Ciclev10024782m.g Citrus clementina HOM05D008797 ORTHO05D010692 0.0e+00 1139.8 1034 59.5
COL.COLO4_12913 Corchorus olitorius HOM05D008797 ORTHO05D010692 0.0e+00 1125.2 1035 57.9
Thecc.06G070900 Theobroma cacao HOM05D008797 ORTHO05D010692 0.0e+00 1122.8 1018 60.1
RcHm_v2.0_Chr2g0136481 Rosa chinensis HOM05D008797 ORTHO05D010692 0.0e+00 1109.4 1018 58.8
FAN14G3291 Fragaria x ananassa HOM05D008797 ORTHO05D010692 0.0e+00 1109.0 1034 58.5
Cpa.g.sc10.227 Carica papaya HOM05D008797 ORTHO05D010692 0.0e+00 1101.7 1035 57.7
Potri.001G172300 Populus trichocarpa HOM05D008797 ORTHO05D010692 0.0e+00 1100.5 1036 57.6
MBI01_g37817_MAGBIO Magnolia biondii HOM05D008797 ORTHO05D010692 0.0e+00 1090.9 1035 56.7
CiPaw.02G155100 Carya illinoinensis HOM05D008797 ORTHO05D010692 0.0e+00 1085.5 1013 59.1
Potri.003G062100 Populus trichocarpa HOM05D008797 ORTHO05D010692 0.0e+00 1083.2 1036 57.3
Sabra01G0139500 Salix brachista HOM05D008797 ORTHO05D010692 0.0e+00 1077.8 1036 56.9
Prupe.3G081300 Prunus persica HOM05D008797 ORTHO05D010692 0.0e+00 1075.5 1034 56.7
CSS0016456 Camellia sinensis var. sinensis HOM05D008797 ORTHO05D010692 8.8e-299 1030.4 1022 56.0
ATR1156G084 Amborella trichopoda HOM05D008797 ORTHO05D010692 3.1e-296 1021.9 1034 53.0
Atru.chr1.3067 Acer truncatum HOM05D008797 ORTHO05D010692 1.5e-277 959.9 767 64.9
Os02g0203500 Oryza sativa ssp. japonica HOM05D008797 ORTHO05D010692 3.3e-261 905.6 1037 48.0
Cc04_g04090 Coffea canephora HOM05D008797 ORTHO05D010692 1.6e-260 903.3 681 68.9
Zm00001eb205560 Zea mays HOM05D008797 ORTHO05D010692 5.8e-250 868.2 1035 46.1
SEGI_11429 Sequoiadendron giganteum HOM05D008797 ORTHO05D010692 2.2e-249 866.3 1034 45.9
Duzib235G0492 Durio zibethinus HOM05D008797 ORTHO05D010692 4.5e-186 656.0 546 63.4
ATR1156G031 Amborella trichopoda HOM05D008797 ORTHO05D010692 3.0e-174 616.7 664 52.7
FvH4_6g30241 Fragaria vesca HOM05D008797 ORTHO05D010692 6.6e-153 545.8 472 60.4
SMO203G0225 Selaginella moellendorffii HOM05D008797 ORTHO05D010692 1.2e-141 508.4 1018 34.0
FvH4_6g30240 Fragaria vesca HOM05D008797 ORTHO05D010692 4.9e-132 476.5 473 56.4
Duzib235G1077 Durio zibethinus HOM05D008797 ORTHO05D010692 3.1e-126 457.2 457 55.4
FAN02G3669 Fragaria x ananassa HOM05D008797 ORTHO05D010692 1.4e-115 421.8 358 63.4
SMO329G0085 Selaginella moellendorffii HOM05D008797 ORTHO05D010692 7.0e-78 296.6 720 29.0
Cc04_g04080 Coffea canephora HOM05D008797 ORTHO05D010692 1.5e-67 262.3 342 47.1
FAN02G2993 Fragaria x ananassa HOM05D008797 ORTHO05D010692 6.3e-55 220.3 211 56.9
ATR1156G043 Amborella trichopoda HOM05D008797 ORTHO05D010692 5.7e-48 197.2 188 52.7
SMO201G0067 Selaginella moellendorffii HOM05D008797 ORTHO05D010692 1.7e-36 159.1 419 28.6
Actinidia15793 Actinidia chinensis HOM05D008797 ORTHO05D010692 4.3e-35 154.5 344 33.7
Zm00001eb226880 Zea mays HOM05D000138 ORTHO05D010692 2.1e-18 99.0 74 63.5
RcHm_v2.0_Chr1g0326451 Rosa chinensis HOM05D000529 ORTHO05D000472 5.3e-09 67.8 246 26.0
Medtr3g466750 Medicago truncatula HOM05D000092 ORTHO05D005910 1.5e-08 66.2 276 25.0
CBR_g37007 Chara braunii HOM05D000529 ORTHO05D000239 3.4e-08 65.1 254 25.6
Nitab4.5_0001655g0170 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.4e-08 65.1 278 22.7
Oeu038338.1 Olea europaea HOM05D000092 ORTHO05D000042 3.4e-08 65.1 176 29.0
Nitab4.5_0001040g0090 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.4e-08 64.7 278 23.4
Carub.0002s0574 Capsella rubella HOM05D000011 ORTHO05D000018 7.6e-08 63.9 252 23.4
Ciclev10024852m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.7e-07 62.8 403 24.6
Cc00_g28310 Coffea canephora HOM05D000009 ORTHO05D000008 1.7e-07 62.8 122 34.4
CBR_g37014 Chara braunii HOM05D000529 ORTHO05D000239 2.2e-07 62.4 244 26.6
MBI12_g17628_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D003282 2.2e-07 62.4 333 26.4
MBI04_g46761_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000042 3.8e-07 61.6 260 24.6
Ciclev10024857m.g Citrus clementina HOM05D000101 ORTHO05D000089 4.9e-07 61.2 182 26.9
SalBow1G0600 Salvia bowleyana HOM05D000011 ORTHO05D000018 4.9e-07 61.2 237 25.3
SalBow1G7224 Salvia bowleyana HOM05D000011 ORTHO05D000018 4.9e-07 61.2 237 25.3
CARHR053930 Cardamine hirsuta HOM05D000011 ORTHO05D000018 1.1e-06 60.1 248 22.2
Ca_15035_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 1.1e-06 60.1 275 23.3
Lsat_1_v5_gn_9_125101 Lactuca sativa HOM05D000529 ORTHO05D000472 1.1e-06 60.1 192 26.0
Ciclev10024849m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.9e-06 59.3 270 24.1
ECA247G3196 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.9e-06 59.3 123 35.0
Oeu033676.1 Olea europaea HOM05D000011 ORTHO05D000018 1.9e-06 59.3 127 32.3
CBR_g37027 Chara braunii HOM05D000529 ORTHO05D000239 2.4e-06 58.9 234 25.2
ECA247G1302 Erigeron canadensis HOM05D000092 ORTHO05D000042 3.2e-06 58.5 146 30.1
Migut.F02043 Erythranthe guttata HOM05D000011 ORTHO05D006231 3.2e-06 58.5 264 21.2
CAN.G767.30 Capsicum annuum HOM05D000011 ORTHO05D000018 4.2e-06 58.2 202 26.7
SalBow1G4803 Salvia bowleyana HOM05D000011 ORTHO05D000018 4.2e-06 58.2 249 23.3
ECA248G1733 Erigeron canadensis HOM05D000009 ORTHO05D000008 7.1e-06 57.4 130 27.7
Migut.G00637 Erythranthe guttata HOM05D000011 ORTHO05D000018 7.1e-06 57.4 192 23.4
COL.COLO4_37323 Corchorus olitorius HOM05D000011 ORTHO05D000018 9.3e-06 57.0 276 22.1
Lsat_1_v5_gn_9_86901 Lactuca sativa HOM05D000101 ORTHO05D000089 9.3e-06 57.0 176 26.7
TWI39G1196 Tripterygium wilfordii HOM05D000011 ORTHO05D000018 9.3e-06 57.0 186 22.6


User provided reference genes

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