Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015220.3 Olea europaea HOM05D003611 ORTHO05D004281 0.0e+00 1926.8 967 100.0
Dinv43856 Davidia involucrata HOM05D003611 ORTHO05D004281 1.7e-212 743.8 908 49.1
MSTRG.4840 Avicennia marina HOM05D003611 ORTHO05D004281 1.0e-201 708.0 902 47.3
Oeu018963.2 Olea europaea HOM05D003611 ORTHO05D004281 1.7e-193 680.6 920 45.4
MSTRG.20858 Avicennia marina HOM05D003611 ORTHO05D004281 1.2e-191 674.5 905 46.6
Cc02_g38450 Coffea canephora HOM05D003611 ORTHO05D004281 2.8e-183 646.7 909 44.6
Dinv32512 Davidia involucrata HOM05D003611 ORTHO05D004281 1.4e-182 644.4 841 47.2
Migut.B01791 Erythranthe guttata HOM05D003611 ORTHO05D004281 8.9e-182 641.7 898 45.9
CSS0009973 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 5.0e-177 625.9 897 44.8
CSS0038908 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 1.6e-175 620.9 908 43.4
Prupe.2G176000 Prunus persica HOM05D003611 ORTHO05D004281 3.3e-168 596.7 925 42.2
Potri.014G089200 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.9e-160 570.9 908 41.9
Haze_15553 Corylus avellana HOM05D003611 ORTHO05D004281 3.3e-160 570.1 945 40.7
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 1.1e-158 565.1 945 41.2
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 5.2e-158 562.8 961 40.3
Actinidia18539 Actinidia chinensis HOM05D003611 ORTHO05D004281 7.5e-157 558.9 897 43.1
Lj7A508G38 Lonicera japonica HOM05D003611 ORTHO05D004281 6.4e-156 555.8 899 43.4
Thecc.01G353800 Theobroma cacao HOM05D003611 ORTHO05D004281 2.4e-155 553.9 916 41.4
DCAR_008631 Daucus carota HOM05D003611 ORTHO05D004281 9.2e-155 552.0 912 41.2
Potri.002G163000 Populus trichocarpa HOM05D003611 ORTHO05D004281 5.6e-152 542.7 915 41.7
TAR375G0370 Trochodendron aralioides HOM05D003611 ORTHO05D004281 7.3e-152 542.3 937 39.9
COL.COLO4_12765 Corchorus olitorius HOM05D003611 ORTHO05D004281 4.7e-151 539.7 928 40.6
Rhsim07G0011300 Rhododendron simsii HOM05D003611 ORTHO05D004281 8.1e-151 538.9 940 40.5
Nn1g01656 Nelumbo nucifera HOM05D003611 ORTHO05D004281 5.2e-150 536.2 921 40.4
Cpa.g.sc184.26 Carica papaya HOM05D003611 ORTHO05D004281 3.4e-149 533.5 930 40.4
Sabra14G0064800 Salix brachista HOM05D003611 ORTHO05D004281 2.9e-148 530.4 915 40.5
Peaxi162Scf00020g01228 Petunia axillaris HOM05D003611 ORTHO05D004281 3.8e-148 530.0 909 39.9
RcHm_v2.0_Chr1g0357311 Rosa chinensis HOM05D003611 ORTHO05D004281 6.4e-148 529.3 933 39.5
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 3.2e-147 526.9 938 39.2
Atru.chr5.552 Acer truncatum HOM05D003611 ORTHO05D004281 4.6e-146 523.1 902 39.8
Sabra02G0147500 Salix brachista HOM05D003611 ORTHO05D004281 1.7e-145 521.2 915 40.0
Nitab4.5_0000200g0170 Nicotiana tabacum HOM05D003611 ORTHO05D004281 5.1e-145 519.6 907 40.2
Ciclev10018621m.g Citrus clementina HOM05D003611 ORTHO05D004281 1.1e-144 518.5 905 39.4
Nitab4.5_0000690g0050 Nicotiana tabacum HOM05D003611 ORTHO05D004281 2.1e-143 514.2 906 40.0
GSVIVG01026955001 Vitis vinifera HOM05D003611 ORTHO05D004281 2.1e-143 514.2 854 40.6
CiPaw.02G033900 Carya illinoinensis HOM05D003611 ORTHO05D004281 4.8e-143 513.1 921 39.5
MD07G1132600 Malus domestica HOM05D003611 ORTHO05D004281 6.9e-142 509.2 867 39.3
Sopen01g038800 Solanum pennellii HOM05D003611 ORTHO05D004281 9.9e-141 505.4 907 39.3
Manes.05G030300 Manihot esculenta HOM05D003611 ORTHO05D004281 2.9e-140 503.8 920 40.3
Nitab4.5_0010703g0040 Nicotiana tabacum HOM05D003611 ORTHO05D004281 2.9e-140 503.8 909 40.2
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 4.9e-140 503.1 925 40.0
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 8.4e-140 502.3 936 38.8
vmacro13239 Vaccinium macrocarpon HOM05D003611 ORTHO05D004281 8.4e-140 502.3 929 38.9
Solyc01g095020.3 Solanum lycopersicum HOM05D003611 ORTHO05D004281 1.2e-138 498.4 906 39.6
Solyc10g012030.4 Solanum lycopersicum HOM05D003611 ORTHO05D004281 2.1e-138 497.7 882 39.6
Sopen10g005780 Solanum pennellii HOM05D003611 ORTHO05D004281 2.1e-138 497.7 897 38.9
TWI14G0836 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 6.0e-138 496.1 915 38.3
Duzib133G0517 Durio zibethinus HOM05D003611 ORTHO05D004281 7.8e-138 495.7 918 38.5
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 7.8e-138 495.7 930 39.9
Peaxi162Scf00585g00319 Petunia axillaris HOM05D003611 ORTHO05D004281 7.8e-138 495.7 900 38.7
FvH4_7g15120 Fragaria vesca HOM05D003611 ORTHO05D004281 8.1e-135 485.7 934 37.3
FAN10G1370 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.4e-134 485.0 932 37.3
FAN10G4104 Fragaria x ananassa HOM05D003611 ORTHO05D004281 3.1e-134 483.8 932 37.2
FAN01G0094 Fragaria x ananassa HOM05D003611 ORTHO05D004281 9.0e-134 482.3 931 37.1
FAN06G4234 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.0e-133 481.1 932 37.3
FAN03G1353 Fragaria x ananassa HOM05D003611 ORTHO05D004281 7.6e-133 479.2 932 36.9
VMungo1383G2804 Vigna mungo HOM05D003611 ORTHO05D004281 9.9e-133 478.8 916 38.4
Ca_00818_v3 Cicer arietinum L. HOM05D003611 ORTHO05D004281 3.8e-132 476.9 905 38.7
FAN06G0771 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.4e-131 474.9 933 37.2
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 7.1e-131 472.6 924 37.3
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 1.6e-130 471.5 914 38.3
Gorai.007G102600 Gossypium raimondii HOM05D003611 ORTHO05D004281 2.7e-130 470.7 924 38.5
Gohir.D11G096300 Gossypium hirsutum HOM05D003611 ORTHO05D004281 3.5e-130 470.3 928 38.8
Gohir.D11G096500 Gossypium hirsutum HOM05D003611 ORTHO05D004281 1.8e-129 468.0 924 37.2
Duzib138G0252 Durio zibethinus HOM05D003611 ORTHO05D004281 3.9e-129 466.8 893 39.0
Gohir.A11G091700 Gossypium hirsutum HOM05D003611 ORTHO05D004281 2.1e-127 461.1 922 37.3
Gohir.A11G091600 Gossypium hirsutum HOM05D003611 ORTHO05D004281 6.2e-127 459.5 924 38.3
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea HOM05D003611 ORTHO05D004281 1.2e-125 455.3 921 38.5
Actinidia10062 Actinidia chinensis HOM05D003611 ORTHO05D004281 7.6e-125 452.6 748 41.0
CANSAT56G4470 Cannabis sativa HOM05D003611 ORTHO05D004281 1.7e-124 451.4 906 36.8
Phvul.008G059100 Phaseolus vulgaris HOM05D003611 ORTHO05D004281 4.6e-122 443.4 879 38.6
DCAR_006945 Daucus carota HOM05D003611 ORTHO05D004281 7.9e-122 442.6 905 36.8
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 6.7e-121 439.5 908 36.2
Actinidia20152 Actinidia chinensis HOM05D003611 ORTHO05D004281 4.3e-120 436.8 841 38.3
Lalb_Chr10g0096711 Lupinus albus HOM05D003611 ORTHO05D004281 7.4e-120 436.0 922 36.8
Eucgr.E00101 Eucalyptus grandis HOM05D003611 ORTHO05D004281 5.3e-118 429.9 923 35.4
TWI23G0144 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 1.0e-116 425.6 910 35.6
MBI11_g13553_MAGBIO Magnolia biondii HOM05D003611 ORTHO05D004281 2.2e-116 424.5 934 36.0
TPR.G22300 Trifolium pratense HOM05D003611 ORTHO05D004281 8.4e-116 422.5 853 37.2
Lalb_Chr17g0339111 Lupinus albus HOM05D003611 ORTHO05D004281 1.6e-114 418.3 930 35.9
PGR042G1491 Punica granatum HOM05D003611 ORTHO05D004281 2.1e-114 417.9 908 36.9
Medtr7g078820 Medicago truncatula HOM05D003611 ORTHO05D004281 3.5e-114 417.2 936 36.4
Hund16671 Selenicereus undatus HOM05D003611 ORTHO05D004281 1.3e-113 415.2 900 35.1
Manes.01G253100 Manihot esculenta HOM05D003611 ORTHO05D004281 3.0e-113 414.1 896 35.5
Psat3g107120 Pisum sativum HOM05D003611 ORTHO05D004281 3.0e-113 414.1 927 36.4
ClCG05G001310 Citrullus lanatus HOM05D003611 ORTHO05D004281 4.3e-112 410.2 920 35.0
Lalb_Chr04g0259241 Lupinus albus HOM05D003611 ORTHO05D004281 9.7e-112 409.1 902 35.9
Aqoxy7G00231 Aquilegia oxysepala HOM05D003611 ORTHO05D004281 1.1e-110 405.6 917 36.0
EL10Ac1g00365 Beta vulgaris HOM05D003611 ORTHO05D004281 7.7e-109 399.4 890 35.8
Sc23g0002620 Simmondsia chinensis HOM05D003611 ORTHO05D004281 7.7e-109 399.4 925 34.2
Sc01g0003270 Simmondsia chinensis HOM05D003611 ORTHO05D004281 4.2e-107 393.7 877 35.9
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 5.5e-107 393.3 910 35.6
AUR62004403 Chenopodium quinoa HOM05D003611 ORTHO05D004281 9.4e-107 392.5 907 35.5
AUR62022609 Chenopodium quinoa HOM05D003611 ORTHO05D004281 2.7e-106 391.0 927 35.8
MELO3C006087.2 Cucumis melo HOM05D003611 ORTHO05D004281 1.8e-105 388.3 923 34.2
Nitab4.5_0000915g0210 Nicotiana tabacum HOM05D003611 ORTHO05D004281 3.0e-105 387.5 844 35.9
Hund27250 Selenicereus undatus HOM05D003611 ORTHO05D004281 3.9e-105 387.1 915 33.9
CsaV3_3G008680 Cucumis sativus L. HOM05D003611 ORTHO05D004281 8.8e-105 386.0 931 34.5
ECA234G2210 Erigeron canadensis HOM05D003611 ORTHO05D004281 2.5e-104 384.4 895 36.4
Hma1.2p1_0627F.1_g191700 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 7.4e-104 382.9 822 36.0
PSO478G2290 Papaver somniferum HOM05D003611 ORTHO05D004281 2.6e-101 374.4 929 34.0
PSO782G0890 Papaver somniferum HOM05D003611 ORTHO05D004281 2.6e-101 374.4 924 34.3
Sed0010511 Sechium edule HOM05D003611 ORTHO05D004281 1.0e-97 362.5 923 32.8
Sed0009698 Sechium edule HOM05D003611 ORTHO05D004281 5.1e-97 360.1 923 32.7
THA.LOC104801395 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 6.3e-95 353.2 900 34.1
AL6G52100 Arabidopsis lyrata HOM05D003611 ORTHO05D004281 2.6e-93 347.8 871 35.1
SalBow3G4181 Salvia bowleyana HOM05D003611 ORTHO05D004281 6.5e-92 343.2 398 52.5
HanXRQChr17g0562341 Helianthus annuus HOM05D003611 ORTHO05D004281 8.5e-92 342.8 895 35.6
Sp6g00840 Schrenkiella parvula HOM05D003611 ORTHO05D004281 1.9e-91 341.7 888 34.5
CARHR249020 Cardamine hirsuta HOM05D003611 ORTHO05D004281 9.4e-91 339.3 854 34.1
Carub.0006s3636 Capsella rubella HOM05D003611 ORTHO05D004281 2.7e-90 337.8 870 33.7
Aa31LG5G730 Aethionema arabicum HOM05D003611 ORTHO05D004281 8.0e-90 336.3 888 34.3
Lalb_Chr17g0339131 Lupinus albus HOM05D003611 ORTHO05D004281 1.0e-89 335.9 924 32.4
THA.LOC104825859 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 1.8e-89 335.1 928 32.7
Lsat_1_v5_gn_4_35681 Lactuca sativa HOM05D003611 ORTHO05D004281 6.7e-89 333.2 907 34.6
SalBow3G3040 Salvia bowleyana HOM05D003611 ORTHO05D004281 2.6e-88 331.3 487 41.3
CDE09G0589 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 5.3e-86 323.6 993 32.1
CDE11G0274 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 2.0e-85 321.6 999 31.1
Thhalv10028394m.g Eutrema salsugineum HOM05D003611 ORTHO05D004281 7.2e-83 313.2 863 32.3
AT4G01290 Arabidopsis thaliana HOM05D003611 ORTHO05D004281 9.4e-83 312.8 860 33.5
SGA_v2.0_scaffold4G02289 Striga asiatica HOM05D003611 ORTHO05D004281 1.2e-82 312.4 408 47.3
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 3.0e-81 307.8 864 33.0
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 8.8e-81 306.2 844 32.5
unitig_8.g3336 Utricularia gibba HOM05D003611 ORTHO05D004281 2.2e-79 301.6 893 32.7
BcaC01g06854 Brassica carinata HOM05D003611 ORTHO05D004281 4.1e-78 297.4 868 32.7
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 5.4e-78 297.0 849 32.4
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 5.4e-78 297.0 849 32.4
BcaC04g24140 Brassica carinata HOM05D003611 ORTHO05D004281 9.1e-78 296.2 849 32.4
BolC3t16170H Brassica oleracea HOM05D003611 ORTHO05D004281 1.6e-77 295.4 874 31.8
C03p38980 Brassica napus HOM05D003611 ORTHO05D004281 1.7e-76 292.0 859 32.5
BcaB01g02283 Brassica carinata HOM05D003611 ORTHO05D004281 2.2e-76 291.6 837 32.3
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 3.2e-75 287.7 875 31.3
A03p31960 Brassica napus HOM05D003611 ORTHO05D004281 1.2e-74 285.8 849 32.2
BraA03t12368Z Brassica rapa HOM05D003611 ORTHO05D004281 4.7e-74 283.9 849 32.0
Lalb_Chr04g0259231 Lupinus albus HOM05D003611 ORTHO05D004281 2.4e-70 271.6 609 35.1
ATR0661G469 Amborella trichopoda HOM05D003611 ORTHO05D004281 1.9e-67 261.9 722 33.5
BcaB05g23959 Brassica carinata HOM05D003611 ORTHO05D004281 5.6e-67 260.4 850 30.9
BcaB01g02151 Brassica carinata HOM05D003611 ORTHO05D004281 9.5e-67 259.6 666 34.7
THA.LOC104817035 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 1.4e-62 245.7 608 34.4
Zm00001eb374330 Zea mays HOM05D003611 ORTHO05D004281 1.9e-59 235.3 887 27.1
Os06g0105900 Oryza sativa ssp. japonica HOM05D003611 ORTHO05D004281 2.9e-55 221.5 903 28.2
unitig_22.g6727 Utricularia gibba HOM05D003611 ORTHO05D004281 6.6e-52 210.3 804 28.6
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 2.5e-51 208.4 525 32.0
Actinidia02822 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.6e-45 189.1 209 48.3
TAR374G1053 Trochodendron aralioides HOM05D003611 ORTHO05D004281 4.6e-45 187.6 609 30.4
Hma1.2p1_0623F.1_g191000 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 2.6e-40 171.8 190 57.9
Ah.05g180220 Amaranthus hybridus HOM05D003611 ORTHO05D004281 1.7e-39 169.1 202 52.0
HPP92_002731 Vanilla planifolia HOM05D003611 ORTHO05D004281 1.1e-38 166.4 467 33.0
Actinidia02823 Actinidia chinensis HOM05D003611 ORTHO05D004281 5.2e-33 147.5 350 33.1
GSVIVG01028853001 Vitis vinifera HOM05D003611 ORTHO05D004281 9.3e-30 136.7 828 24.3
Haze_00050 Corylus avellana HOM05D003611 ORTHO05D004281 7.8e-29 133.7 921 23.8
Cfa016292 Carpinus fangiana HOM05D003611 ORTHO05D004281 3.3e-27 128.3 206 40.3
QL09p012690 Quercus lobata HOM05D003611 ORTHO05D004281 2.8e-26 125.2 373 29.5
Duzib268G1133 Durio zibethinus HOM05D003611 ORTHO05D004281 2.0e-24 119.0 137 45.3
Dinv35257 Davidia involucrata HOM05D003611 ORTHO05D004281 7.6e-24 117.1 958 24.1
TAR374G0905 Trochodendron aralioides HOM05D003611 ORTHO05D004281 2.9e-23 115.2 155 41.9
Mapoly0012s0024 Marchantia polymorpha HOM05D003611 ORTHO05D021332 3.8e-23 114.8 704 26.6
SEGI_14695 Sequoiadendron giganteum HOM05D003611 ORTHO05D004281 1.2e-21 109.8 371 29.9
Lalb_Chr04g0259211 Lupinus albus HOM05D003611 ORTHO05D004281 4.6e-21 107.8 97 62.9
Pp3c19_15630 Physcomitrium patens HOM05D025697 ORTHO05D004281 1.7e-20 105.9 728 25.7
TWI23G0357 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 2.1e-18 99.0 800 24.5
Pp3c18_8750 Physcomitrium patens HOM05D025697 ORTHO05D004281 2.0e-16 92.4 804 23.9
Atru.chr1.351 Acer truncatum HOM05D003611 ORTHO05D004281 3.4e-16 91.7 164 36.6
Hma1.2p1_0623F.1_g191005 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 5.8e-16 90.9 89 50.6
Hma1.2p1_2961F.1_g330880 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 1.7e-15 89.4 266 35.3
ATR0661G048 Amborella trichopoda HOM05D003611 ORTHO05D004281 1.1e-14 86.7 206 36.9
Duzib205G1157 Durio zibethinus HOM05D003611 ORTHO05D011897 5.5e-14 84.3 297 31.0
Thecc.03G184800 Theobroma cacao HOM05D003611 ORTHO05D011897 1.0e-12 80.1 229 32.3
Ciclev10006595m.g Citrus clementina HOM05D003611 ORTHO05D004281 3.3e-11 75.1 466 23.4
unitig_22.g6726 Utricularia gibba HOM05D003611 ORTHO05D004281 9.6e-11 73.6 63 57.1
SEGI_21460 Sequoiadendron giganteum HOM05D003611 ORTHO05D004281 4.8e-10 71.2 283 30.7
Gorai.007G013100 Gossypium raimondii HOM05D003611 ORTHO05D011897 9.0e-09 67.0 143 40.6
Gohir.A11G012500 Gossypium hirsutum HOM05D003611 ORTHO05D011897 1.2e-08 66.6 143 39.9
HPP92_002605 Vanilla planifolia HOM05D046274 ORTHO05D004281 5.8e-08 64.3 341 27.6
Gohir.D11G011700 Gossypium hirsutum HOM05D003611 ORTHO05D011897 6.5e-07 60.8 154 37.0
SMO137G0129 Selaginella moellendorffii HOM05D024364 ORTHO05D021332 5.5e-06 57.8 154 33.1


User provided reference genes

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