Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015192.1 Olea europaea HOM05D003669 ORTHO05D005046 9.6e-47 189.9 101 100.0
Oeu041090.1 Olea europaea HOM05D003669 ORTHO05D005046 9.3e-34 146.7 100 80.0
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 1.3e-22 109.8 100 64.0
Nitab4.5_0000720g0060 Nicotiana tabacum HOM05D003669 ORTHO05D005046 6.3e-22 107.5 100 62.0
Nitab4.5_0000141g0030 Nicotiana tabacum HOM05D003669 ORTHO05D005046 4.1e-21 104.8 100 61.0
Dinv16692 Davidia involucrata HOM05D003669 ORTHO05D005046 9.1e-21 103.6 100 61.0
SalBow2G2159 Salvia bowleyana HOM05D003669 ORTHO05D005046 2.0e-20 102.4 100 60.0
SalBow2G3632 Salvia bowleyana HOM05D003669 ORTHO05D005046 2.0e-20 102.4 100 60.0
Hma1.2p1_0354F.1_g133780 Hydrangea macrophylla HOM05D003669 ORTHO05D005046 2.6e-20 102.1 100 60.0
Cc11_g12530 Coffea canephora HOM05D003669 ORTHO05D005046 5.0e-19 97.8 101 59.4
Peaxi162Scf00097g00103 Petunia axillaris HOM05D003669 ORTHO05D005046 1.6e-17 92.8 100 55.0
CSS0031393 Camellia sinensis var. sinensis HOM05D003669 ORTHO05D005046 4.7e-17 91.3 100 56.0
Migut.L01241 Erythranthe guttata HOM05D003669 ORTHO05D005046 6.1e-17 90.9 101 57.4
Rhsim12G0133100 Rhododendron simsii HOM05D003669 ORTHO05D005046 7.9e-17 90.5 100 52.0
Cfa008924 Carpinus fangiana HOM05D003669 ORTHO05D005046 1.0e-16 90.1 100 54.0
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 1.8e-16 89.4 100 52.0
PGSC0003DMG400026831 Solanum tuberosum HOM05D003669 ORTHO05D005046 1.8e-16 89.4 100 54.0
MSTRG.7776 Avicennia marina HOM05D003669 ORTHO05D005046 2.3e-16 89.0 100 55.0
Duzib251G0808 Durio zibethinus HOM05D003669 ORTHO05D005046 3.0e-16 88.6 100 54.0
Manes.01G032000 Manihot esculenta HOM05D003669 ORTHO05D005046 3.0e-16 88.6 100 53.0
Sabra10G0124200 Salix brachista HOM05D003669 ORTHO05D005046 3.9e-16 88.2 100 56.0
TAR629G2685 Trochodendron aralioides HOM05D003669 ORTHO05D005046 3.9e-16 88.2 104 56.7
Actinidia33230 Actinidia chinensis HOM05D003669 ORTHO05D005046 8.8e-16 87.0 100 52.0
Lj3P1033T30 Lonicera japonica HOM05D003669 ORTHO05D005046 1.5e-15 86.3 90 56.7
Potri.010G163400 Populus trichocarpa HOM05D003669 ORTHO05D005046 2.0e-15 85.9 100 55.0
Peaxi162Scf00222g00021 Petunia axillaris HOM05D003669 ORTHO05D005046 3.3e-15 85.1 100 53.0
MSTRG.725 Avicennia marina HOM05D003669 ORTHO05D005046 4.4e-15 84.7 99 54.5
Solyc01g010990.2 Solanum lycopersicum HOM05D003669 ORTHO05D005046 4.4e-15 84.7 100 52.0
Sopen01g006940 Solanum pennellii HOM05D003669 ORTHO05D005046 4.4e-15 84.7 100 52.0
Lsat_1_v5_gn_8_49161 Lactuca sativa HOM05D003669 ORTHO05D005046 7.4e-15 84.0 99 54.5
CiPaw.06G089100 Carya illinoinensis HOM05D003669 ORTHO05D005046 9.7e-15 83.6 100 52.0
Haze_11953 Corylus avellana HOM05D003669 ORTHO05D005046 9.7e-15 83.6 100 52.0
Thecc.02G339000 Theobroma cacao HOM05D003669 ORTHO05D005046 1.3e-14 83.2 100 52.0
CSS0046805 Camellia sinensis var. sinensis HOM05D003669 ORTHO05D005046 1.7e-14 82.8 81 59.3
Atru.chr11.1711 Acer truncatum HOM05D003669 ORTHO05D005046 2.2e-14 82.4 101 51.5
Potri.008G091500 Populus trichocarpa HOM05D003669 ORTHO05D005046 2.2e-14 82.4 100 54.0
SGA_v2.0_scaffold16G07737 Striga asiatica HOM05D003669 ORTHO05D005046 2.2e-14 82.4 100 53.0
MD13G1068000 Malus domestica HOM05D003669 ORTHO05D005046 2.8e-14 82.0 100 56.0
Duzib268G1480 Durio zibethinus HOM05D003669 ORTHO05D005046 3.7e-14 81.6 100 52.0
Nitab4.5_0028573g0010 Nicotiana tabacum HOM05D003669 ORTHO05D005046 3.7e-14 81.6 102 51.0
Prupe.1G280100 Prunus persica HOM05D003669 ORTHO05D005046 3.7e-14 81.6 100 54.0
CANSAT64G1602 Cannabis sativa HOM05D003669 ORTHO05D005046 4.8e-14 81.3 100 51.0
CAN.G314.1 Capsicum annuum HOM05D003669 ORTHO05D005046 4.8e-14 81.3 100 51.0
Nitab4.5_0000391g0150 Nicotiana tabacum HOM05D003669 ORTHO05D005046 6.3e-14 80.9 102 52.0
Lj6P783T30 Lonicera japonica HOM05D003669 ORTHO05D005046 8.2e-14 80.5 100 51.0
Duzib248G1252 Durio zibethinus HOM05D003669 ORTHO05D005046 3.1e-13 78.6 100 52.0
Sabra08G0068500 Salix brachista HOM05D003669 ORTHO05D005046 3.1e-13 78.6 100 50.0
MD16G1066800 Malus domestica HOM05D003669 ORTHO05D005046 9.1e-13 77.0 86 57.0
Nn4g23289 Nelumbo nucifera HOM05D003669 ORTHO05D005046 1.2e-12 76.6 104 51.9
Solyc05g012870.1 Solanum lycopersicum HOM05D003669 ORTHO05D005046 1.2e-12 76.6 95 49.5
Sopen05g007700 Solanum pennellii HOM05D003669 ORTHO05D005046 2.0e-12 75.9 95 49.5
HanXRQChr08g0211271 Helianthus annuus HOM05D003669 ORTHO05D005046 4.5e-12 74.7 99 51.5
TWI31G0268 Tripterygium wilfordii HOM05D003669 ORTHO05D005046 7.7e-12 73.9 100 47.0
PSO063G6284 Papaver somniferum HOM05D003669 ORTHO05D005046 1.3e-11 73.2 58 67.2
COL.COLO4_27966 Corchorus olitorius HOM05D003669 ORTHO05D005046 1.7e-11 72.8 100 45.0
MBI19_g28315_MAGBIO Magnolia biondii HOM05D003669 ORTHO05D005046 2.2e-11 72.4 106 50.0
TPR.G34083 Trifolium pratense HOM05D003669 ORTHO05D005046 2.9e-11 72.0 103 48.5
Gorai.013G089500 Gossypium raimondii HOM05D003669 ORTHO05D005046 3.8e-11 71.6 84 54.8
QL03p069846 Quercus lobata HOM05D003669 ORTHO05D005046 3.8e-11 71.6 86 51.2
DCAR_023812 Daucus carota HOM05D003669 ORTHO05D005046 5.0e-11 71.2 100 47.0
PGSC0003DMG400028338 Solanum tuberosum HOM05D003669 ORTHO05D005046 5.0e-11 71.2 95 46.3
Thhalv10018794m.g Eutrema salsugineum HOM05D003669 ORTHO05D005046 6.5e-11 70.9 78 55.1
Eucgr.B03191 Eucalyptus grandis HOM05D003669 ORTHO05D005046 1.1e-10 70.1 103 46.6
Gohir.D13G078300 Gossypium hirsutum HOM05D003669 ORTHO05D005046 1.1e-10 70.1 84 53.6
ECA233G0305 Erigeron canadensis HOM05D003669 ORTHO05D005046 1.5e-10 69.7 62 66.1
Nn3g17339 Nelumbo nucifera HOM05D003669 ORTHO05D005046 1.5e-10 69.7 104 49.0
Sc11g0002160 Simmondsia chinensis HOM05D003669 ORTHO05D005046 1.5e-10 69.7 78 56.4
Ca_23887_v3 Cicer arietinum L. HOM05D003669 ORTHO05D005046 1.9e-10 69.3 104 48.1
FAN08G0960 Fragaria x ananassa HOM05D003669 ORTHO05D005046 1.9e-10 69.3 101 51.5
Glyma.07G227800 Glycine max HOM05D003669 ORTHO05D005046 1.9e-10 69.3 101 46.5
PSO063G3148 Papaver somniferum HOM05D003669 ORTHO05D005046 1.9e-10 69.3 109 45.9
Ciclev10033399m.g Citrus clementina HOM05D003669 ORTHO05D005046 2.5e-10 68.9 101 47.5
PGR102G2611 Punica granatum HOM05D003669 ORTHO05D005046 2.5e-10 68.9 72 56.9
FAN18G1113 Fragaria x ananassa HOM05D003669 ORTHO05D005046 3.2e-10 68.6 101 51.5
Psat7g135560 Pisum sativum HOM05D003669 ORTHO05D005046 3.2e-10 68.6 103 49.5
CsaV3_5G033070 Cucumis sativus L. HOM05D003669 ORTHO05D005046 4.2e-10 68.2 99 47.5
Ah.03g134650 Amaranthus hybridus HOM05D003669 ORTHO05D005046 7.2e-10 67.4 57 66.7
ClCG05G023980 Citrullus lanatus HOM05D003669 ORTHO05D005046 7.2e-10 67.4 105 46.7
FAN13G0674 Fragaria x ananassa HOM05D003669 ORTHO05D005046 7.2e-10 67.4 62 69.4
Medtr4g082350 Medicago truncatula HOM05D003669 ORTHO05D005046 7.2e-10 67.4 101 46.5
RcHm_v2.0_Chr7g0221801 Rosa chinensis HOM05D003669 ORTHO05D005046 7.2e-10 67.4 101 51.5
unitig_8.g3190 Utricularia gibba HOM05D003669 ORTHO05D005046 7.2e-10 67.4 100 47.0
Carub.0002s1603 Capsella rubella HOM05D003669 ORTHO05D005046 9.4e-10 67.0 77 54.5
MELO3C012128.2 Cucumis melo HOM05D003669 ORTHO05D005046 1.2e-09 66.6 105 45.7
Glyma.20G030800 Glycine max HOM05D003669 ORTHO05D005046 1.6e-09 66.2 101 47.5
Phvul.002G168800 Phaseolus vulgaris HOM05D003669 ORTHO05D005046 1.6e-09 66.2 101 45.5
AT1G69430 Arabidopsis thaliana HOM05D003669 ORTHO05D005046 3.6e-09 65.1 58 65.5
EL10Ac6g13272 Beta vulgaris HOM05D003669 ORTHO05D005046 3.6e-09 65.1 60 60.0
AL2G28540 Arabidopsis lyrata HOM05D003669 ORTHO05D005046 4.7e-09 64.7 79 51.9
Gohir.D02G127500 Gossypium hirsutum HOM05D003669 ORTHO05D005046 4.7e-09 64.7 102 45.1
Gorai.005G143100 Gossypium raimondii HOM05D003669 ORTHO05D005046 4.7e-09 64.7 102 45.1
VMungo0251G2119 Vigna mungo HOM05D003669 ORTHO05D005046 4.7e-09 64.7 101 46.5
FvH4_5g29140 Fragaria vesca HOM05D003669 ORTHO05D005046 6.1e-09 64.3 102 51.0
Aqoxy3G03503 Aquilegia oxysepala HOM05D003669 ORTHO05D005046 8.0e-09 63.9 94 47.9
Gohir.A03G102600 Gossypium hirsutum HOM05D003669 ORTHO05D005046 8.0e-09 63.9 102 45.1
BcaB03g14707 Brassica carinata HOM05D003669 ORTHO05D005046 1.0e-08 63.5 78 53.8
TWI75G1484 Tripterygium wilfordii HOM05D003669 ORTHO05D005046 1.0e-08 63.5 100 43.0
A07p35780 Brassica napus HOM05D003669 ORTHO05D005046 1.4e-08 63.2 57 63.2
C06p40420 Brassica napus HOM05D003669 ORTHO05D005046 1.4e-08 63.2 57 63.2
BolC6t39390H Brassica oleracea HOM05D003669 ORTHO05D005046 1.4e-08 63.2 57 63.2
BraA07t31164Z Brassica rapa HOM05D003669 ORTHO05D005046 1.4e-08 63.2 57 63.2
FAN04G2355 Fragaria x ananassa HOM05D003669 ORTHO05D005046 1.4e-08 63.2 102 49.0
Sed0017288 Sechium edule HOM05D003669 ORTHO05D005046 1.8e-08 62.8 60 60.0
unitig_22.g6502 Utricularia gibba HOM05D003669 ORTHO05D005046 1.8e-08 62.8 99 39.4
CARHR062320 Cardamine hirsuta HOM05D003669 ORTHO05D005046 2.3e-08 62.4 77 53.2
CAN.G964.18 Capsicum annuum HOM05D003669 ORTHO05D005046 3.0e-08 62.0 96 41.7
THA.LOC104822182 Tarenaya hassleriana HOM05D003669 ORTHO05D005046 3.0e-08 62.0 84 48.8
Cpa.g.sc1.72 Carica papaya HOM05D003669 ORTHO05D005046 5.2e-08 61.2 87 47.1
unitig_749.g13213 Utricularia gibba HOM05D003669 ORTHO05D005046 5.2e-08 61.2 101 45.5
BcaC05g26402 Brassica carinata HOM05D003669 ORTHO05D005046 6.7e-08 60.8 58 63.8
A09p40060 Brassica napus HOM05D003669 ORTHO05D005046 6.7e-08 60.8 58 63.8
C05p24360 Brassica napus HOM05D003669 ORTHO05D005046 6.7e-08 60.8 58 63.8
GSVIVG01012487001 Vitis vinifera HOM05D003669 ORTHO05D005046 6.7e-08 60.8 51 70.6
Aa31LG7G8440 Aethionema arabicum HOM05D003669 ORTHO05D005046 1.1e-07 60.1 58 58.6
Hma1.2p1_0407F.1_g146200 Hydrangea macrophylla HOM05D003669 ORTHO05D005046 1.1e-07 60.1 50 70.0
Lalb_Chr09g0329151 Lupinus albus HOM05D003669 ORTHO05D005046 1.1e-07 60.1 103 46.6
BraA09t39502Z Brassica rapa HOM05D003669 ORTHO05D005046 1.5e-07 59.7 55 65.5
CDE04G3171 Ceratophyllum demersum HOM05D003669 ORTHO05D005046 1.5e-07 59.7 100 44.0
BolC5t31170H Brassica oleracea HOM05D003669 ORTHO05D005046 2.6e-07 58.9 58 62.1
AL1G39080 Arabidopsis lyrata HOM05D003669 ORTHO05D005046 3.3e-07 58.5 58 62.1
THA.LOC104822905 Tarenaya hassleriana HOM05D003669 ORTHO05D005046 4.4e-07 58.2 87 47.1
Lj4g0023966 Lotus japonicus HOM05D003669 ORTHO05D005046 5.7e-07 57.8 101 43.6
Thhalv10008119m.g Eutrema salsugineum HOM05D003669 ORTHO05D005046 7.5e-07 57.4 82 52.4
Aa31LG4G11440 Aethionema arabicum HOM05D003669 ORTHO05D005046 9.7e-07 57.0 56 57.1
CARHR025320 Cardamine hirsuta HOM05D003669 ORTHO05D005046 9.7e-07 57.0 54 63.0
AUR62005854 Chenopodium quinoa HOM05D003669 ORTHO05D005046 1.3e-06 56.6 64 50.0
AT1G26650 Arabidopsis thaliana HOM05D003669 ORTHO05D005046 1.7e-06 56.2 58 60.3
Carub.0001s2438 Capsella rubella HOM05D003669 ORTHO05D005046 1.7e-06 56.2 58 58.6
THA.LOC104808637 Tarenaya hassleriana HOM05D003669 ORTHO05D005046 2.2e-06 55.8 87 44.8
SEGI_22214 Sequoiadendron giganteum HOM05D003669 ORTHO05D005046 2.8e-06 55.5 54 59.3
Lalb_Chr05g0220191 Lupinus albus HOM05D003669 ORTHO05D005046 3.7e-06 55.1 85 45.9
CDE02G4737 Ceratophyllum demersum HOM05D003669 ORTHO05D005046 4.8e-06 54.7 53 62.3
AUR62032846 Chenopodium quinoa HOM05D003669 ORTHO05D005046 4.8e-06 54.7 86 41.9
SpUn0008_0120 Schrenkiella parvula HOM05D003669 ORTHO05D005046 4.8e-06 54.7 54 63.0
SpUn0019_0020 Schrenkiella parvula HOM05D003669 ORTHO05D005046 4.8e-06 54.7 54 63.0
SpUn0296_0010 Schrenkiella parvula HOM05D003669 ORTHO05D005046 4.8e-06 54.7 54 63.0


User provided reference genes

Program Settings