Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015180.1 Olea europaea HOM05D004456 ORTHO05D005287 5.7e-65 250.8 125 100.0
Oeu041103.1 Olea europaea HOM05D004456 ORTHO05D005287 1.1e-63 246.5 125 97.6
SalBow7G3040 Salvia bowleyana HOM05D004456 ORTHO05D005287 2.9e-61 238.4 125 95.2
PGSC0003DMG400021190 Solanum tuberosum HOM05D004456 ORTHO05D005287 9.4e-60 233.4 126 91.3
Solyc02g069840.3 Solanum lycopersicum HOM05D004456 ORTHO05D005287 1.2e-59 233.0 126 90.5
Sopen02g019000 Solanum pennellii HOM05D004456 ORTHO05D005287 1.2e-59 233.0 126 90.5
SGA_v2.0_scaffold223G42863 Striga asiatica HOM05D004456 ORTHO05D005287 1.6e-59 232.6 125 92.8
CAN.G79.42 Capsicum annuum HOM05D004456 ORTHO05D005287 4.7e-59 231.1 127 90.6
Nitab4.5_0004615g0060 Nicotiana tabacum HOM05D004456 ORTHO05D005287 8.0e-59 230.3 126 91.3
CSS0000388 Camellia sinensis var. sinensis HOM05D004456 ORTHO05D005287 1.4e-58 229.6 125 89.6
MSTRG.14797 Avicennia marina HOM05D004456 ORTHO05D005287 1.8e-58 229.2 125 89.6
Hma1.2p1_0333F.1_g128240 Hydrangea macrophylla HOM05D004456 ORTHO05D005287 1.8e-58 229.2 126 90.5
Migut.M01926 Erythranthe guttata HOM05D004456 ORTHO05D005287 5.2e-58 227.6 125 88.8
Nitab4.5_0001225g0030 Nicotiana tabacum HOM05D004456 ORTHO05D005287 5.2e-58 227.6 126 90.5
ECA246G0212 Erigeron canadensis HOM05D004456 ORTHO05D005287 8.8e-58 226.9 126 91.3
DCAR_003856 Daucus carota HOM05D004456 ORTHO05D005287 1.1e-57 226.5 126 90.5
TAR374G0177 Trochodendron aralioides HOM05D004456 ORTHO05D005287 1.1e-57 226.5 126 88.9
Haze_16244 Corylus avellana HOM05D004456 ORTHO05D005287 1.5e-57 226.1 126 89.7
Dinv05126 Davidia involucrata HOM05D004456 ORTHO05D005287 1.5e-57 226.1 126 89.7
Migut.M01892 Erythranthe guttata HOM05D004456 ORTHO05D005287 1.5e-57 226.1 125 88.0
HanXRQChr03g0087831 Helianthus annuus HOM05D004456 ORTHO05D005287 2.0e-57 225.7 126 90.5
Rhsim05G0148000 Rhododendron simsii HOM05D004456 ORTHO05D005287 2.0e-57 225.7 125 88.0
Actinidia13485 Actinidia chinensis HOM05D004456 ORTHO05D005287 3.3e-57 224.9 125 88.0
CiPaw.01G092700 Carya illinoinensis HOM05D004456 ORTHO05D005287 3.3e-57 224.9 126 88.9
Ciclev10029584m.g Citrus clementina HOM05D004456 ORTHO05D005287 3.3e-57 224.9 123 91.1
Lsat_1_v5_gn_4_69821 Lactuca sativa HOM05D004456 ORTHO05D005287 3.3e-57 224.9 126 88.9
unitig_37.g12076 Utricularia gibba HOM05D004456 ORTHO05D005287 3.3e-57 224.9 125 88.0
CANSAT35G0656 Cannabis sativa HOM05D004456 ORTHO05D005287 4.4e-57 224.6 126 89.7
CANSAT56G2838 Cannabis sativa HOM05D004456 ORTHO05D005287 4.4e-57 224.6 126 89.7
FAN25G2185 Fragaria x ananassa HOM05D004456 ORTHO05D005287 4.4e-57 224.6 125 88.0
Manes.03G095700 Manihot esculenta HOM05D004456 ORTHO05D005287 5.7e-57 224.2 126 89.7
TAR622G1262 Trochodendron aralioides HOM05D004456 ORTHO05D005287 5.7e-57 224.2 125 88.0
FvH4_3g14110 Fragaria vesca HOM05D004456 ORTHO05D005287 7.4e-57 223.8 125 87.2
FAN11G1980 Fragaria x ananassa HOM05D004456 ORTHO05D005287 7.4e-57 223.8 125 87.2
Cc09_g08010 Coffea canephora HOM05D004456 ORTHO05D005287 9.7e-57 223.4 126 89.7
HanXRQChr17g0543051 Helianthus annuus HOM05D004456 ORTHO05D005287 9.7e-57 223.4 126 88.9
RcHm_v2.0_Chr5g0023421 Rosa chinensis HOM05D004456 ORTHO05D005287 9.7e-57 223.4 125 88.0
vmacro03391 Vaccinium macrocarpon HOM05D004456 ORTHO05D005287 1.3e-56 223.0 125 86.4
Atru.chr8.947 Acer truncatum HOM05D004456 ORTHO05D005287 2.2e-56 222.2 123 89.4
unitig_92.g28171 Utricularia gibba HOM05D004456 ORTHO05D005287 2.2e-56 222.2 125 86.4
Aqoxy3G00192 Aquilegia oxysepala HOM05D004456 ORTHO05D005287 2.8e-56 221.9 126 87.3
ClCG02G018700 Citrullus lanatus HOM05D004456 ORTHO05D005287 2.8e-56 221.9 126 87.3
MELO3C019631.2 Cucumis melo HOM05D004456 ORTHO05D005287 2.8e-56 221.9 126 87.3
Lsat_1_v5_gn_1_42081 Lactuca sativa HOM05D004456 ORTHO05D005287 2.8e-56 221.9 124 88.7
Potri.017G119300 Populus trichocarpa HOM05D004456 ORTHO05D005287 2.8e-56 221.9 118 93.2
FAN16G3308 Fragaria x ananassa HOM05D004456 ORTHO05D005287 3.7e-56 221.5 125 86.4
CsaV3_6G013470 Cucumis sativus L. HOM05D004456 ORTHO05D005287 4.8e-56 221.1 126 86.5
FAN21G1444 Fragaria x ananassa HOM05D004456 ORTHO05D005287 4.8e-56 221.1 125 86.4
Thecc.06G049600 Theobroma cacao HOM05D004456 ORTHO05D005287 4.8e-56 221.1 126 88.9
COL.COLO4_26811 Corchorus olitorius HOM05D004456 ORTHO05D005287 6.3e-56 220.7 118 90.7
Gohir.D11G338800 Gossypium hirsutum HOM05D004456 ORTHO05D005287 6.3e-56 220.7 126 88.1
Gorai.007G368500 Gossypium raimondii HOM05D004456 ORTHO05D005287 6.3e-56 220.7 126 88.1
Prupe.1G563700 Prunus persica HOM05D004456 ORTHO05D005287 8.2e-56 220.3 126 88.9
Prupe.4G128400 Prunus persica HOM05D004456 ORTHO05D005287 8.2e-56 220.3 126 88.9
HPP92_025894 Vanilla planifolia HOM05D004456 ORTHO05D005287 8.2e-56 220.3 125 88.8
Sed0010742 Sechium edule HOM05D004456 ORTHO05D005287 1.1e-55 219.9 126 86.5
MBI03_g42617_MAGBIO Magnolia biondii HOM05D004456 ORTHO05D005287 1.4e-55 219.5 125 87.2
Sed0012483 Sechium edule HOM05D004456 ORTHO05D005287 1.4e-55 219.5 123 87.8
Sabra17G0098500 Salix brachista HOM05D004456 ORTHO05D005287 1.8e-55 219.2 118 91.5
Sc17g0004630 Simmondsia chinensis HOM05D004456 ORTHO05D005287 2.4e-55 218.8 125 88.0
Hund17691 Selenicereus undatus HOM05D004456 ORTHO05D005287 3.1e-55 218.4 125 86.4
Zm00001eb353650 Zea mays HOM05D004456 ORTHO05D005287 3.1e-55 218.4 125 87.2
Duzib235G0097 Durio zibethinus HOM05D004456 ORTHO05D005287 4.1e-55 218.0 126 86.5
Ah.06g192000 Amaranthus hybridus HOM05D004456 ORTHO05D005287 5.3e-55 217.6 125 86.4
Gohir.A11G319600 Gossypium hirsutum HOM05D004456 ORTHO05D005287 9.1e-55 216.9 126 86.5
CDE04G1757 Ceratophyllum demersum HOM05D004456 ORTHO05D005287 1.2e-54 216.5 119 90.8
MD10G1216300 Malus domestica HOM05D004456 ORTHO05D005287 1.2e-54 216.5 126 87.3
THA.LOC104812342 Tarenaya hassleriana HOM05D004456 ORTHO05D005287 1.2e-54 216.5 118 88.1
CDE08G1311 Ceratophyllum demersum HOM05D004456 ORTHO05D005287 1.6e-54 216.1 118 89.0
PSO339G5129 Papaver somniferum HOM05D004456 ORTHO05D005287 1.6e-54 216.1 127 84.3
PSO384G3508 Papaver somniferum HOM05D004456 ORTHO05D005287 1.6e-54 216.1 127 84.3
Aa31LG7G1200 Aethionema arabicum HOM05D004456 ORTHO05D005287 2.0e-54 215.7 112 92.9
Os05g0528200 Oryza sativa ssp. japonica HOM05D004456 ORTHO05D005287 2.0e-54 215.7 125 86.4
arahy.Tifrunner.gnm1.ann1.PTU9AS Arachis hypogaea HOM05D004456 ORTHO05D005287 2.6e-54 215.3 118 90.7
arahy.Tifrunner.gnm1.ann1.VAHF8H Arachis hypogaea HOM05D004456 ORTHO05D005287 2.6e-54 215.3 118 90.7
Phvul.009G196700 Phaseolus vulgaris HOM05D004456 ORTHO05D005287 2.6e-54 215.3 118 90.7
GSVIVG01015827001 Vitis vinifera HOM05D004456 ORTHO05D005287 2.6e-54 215.3 126 83.3
BcaB03g13034 Brassica carinata HOM05D004456 ORTHO05D005287 3.5e-54 214.9 118 87.3
BcaC07g38811 Brassica carinata HOM05D004456 ORTHO05D005287 3.5e-54 214.9 118 89.0
A06p12700 Brassica napus HOM05D004456 ORTHO05D005287 3.5e-54 214.9 118 89.0
A08p31300 Brassica napus HOM05D004456 ORTHO05D005287 3.5e-54 214.9 118 89.0
C05p15000 Brassica napus HOM05D004456 ORTHO05D005287 3.5e-54 214.9 118 89.0
C08p17530 Brassica napus HOM05D004456 ORTHO05D005287 3.5e-54 214.9 118 89.0
BolC5t30215H Brassica oleracea HOM05D004456 ORTHO05D005287 3.5e-54 214.9 118 89.0
BolC8t49379H Brassica oleracea HOM05D004456 ORTHO05D005287 3.5e-54 214.9 118 89.0
BraA06t24430Z Brassica rapa HOM05D004456 ORTHO05D005287 3.5e-54 214.9 118 89.0
BraA08t35053Z Brassica rapa HOM05D004456 ORTHO05D005287 3.5e-54 214.9 118 87.3
LjContig00564g0013918 Lotus japonicus HOM05D004456 ORTHO05D005287 3.5e-54 214.9 121 86.0
Os01g0734100 Oryza sativa ssp. japonica HOM05D004456 ORTHO05D005287 3.5e-54 214.9 125 85.6
PGR142G2466 Punica granatum HOM05D004456 ORTHO05D005287 4.5e-54 214.5 126 86.5
Ca_06131_v3 Cicer arietinum L. HOM05D004456 ORTHO05D005287 5.9e-54 214.2 121 87.6
Glyma.02G272000 Glycine max HOM05D004456 ORTHO05D005287 5.9e-54 214.2 118 89.8
Medtr0027s0250 Medicago truncatula HOM05D004456 ORTHO05D005287 1.0e-53 213.4 118 89.0
Medtr5g087380 Medicago truncatula HOM05D004456 ORTHO05D005287 1.0e-53 213.4 118 89.0
PGR142G0549 Punica granatum HOM05D004456 ORTHO05D005287 1.0e-53 213.4 126 85.7
CARHR017200 Cardamine hirsuta HOM05D004456 ORTHO05D005287 1.3e-53 213.0 118 86.4
VMungo1309G1322 Vigna mungo HOM05D004456 ORTHO05D005287 1.3e-53 213.0 118 89.0
AT1G16740 Arabidopsis thaliana HOM05D004456 ORTHO05D005287 1.7e-53 212.6 118 86.4
BcaB02g06679 Brassica carinata HOM05D004456 ORTHO05D005287 1.7e-53 212.6 118 88.1
Carub.0001s1648 Capsella rubella HOM05D004456 ORTHO05D005287 1.7e-53 212.6 118 86.4
Thhalv10009114m.g Eutrema salsugineum HOM05D004456 ORTHO05D005287 1.7e-53 212.6 118 88.1
Sp1g14890 Schrenkiella parvula HOM05D004456 ORTHO05D005287 1.7e-53 212.6 118 88.1
TWI81G0537 Tripterygium wilfordii HOM05D004456 ORTHO05D005287 1.7e-53 212.6 118 89.0
EL10Ac1g00574 Beta vulgaris HOM05D004456 ORTHO05D005287 2.2e-53 212.2 125 85.6
Lalb_Chr04g0249811 Lupinus albus HOM05D004456 ORTHO05D005287 2.9e-53 211.8 118 89.0
TPR.G29918 Trifolium pratense HOM05D004456 ORTHO05D005287 3.8e-53 211.5 118 88.1
AL1G28910 Arabidopsis lyrata HOM05D004456 ORTHO05D005287 5.0e-53 211.1 110 91.8
TWI60G0757 Tripterygium wilfordii HOM05D004456 ORTHO05D005287 5.0e-53 211.1 120 87.5
ATR0618G343 Amborella trichopoda HOM05D004456 ORTHO05D005287 6.5e-53 210.7 121 86.8
EL10Ac4g09241 Beta vulgaris HOM05D004456 ORTHO05D005287 6.5e-53 210.7 125 84.8
vmacro03444 Vaccinium macrocarpon HOM05D004456 ORTHO05D005287 6.5e-53 210.7 118 85.6
AUR62005032 Chenopodium quinoa HOM05D004456 ORTHO05D005287 8.5e-53 210.3 125 84.8
Lalb_Chr10g0105771 Lupinus albus HOM05D004456 ORTHO05D005287 8.5e-53 210.3 118 89.0
PGR142G2683 Punica granatum HOM05D004456 ORTHO05D005287 1.1e-52 209.9 126 84.9
PGR142G0749 Punica granatum HOM05D004456 ORTHO05D005287 4.2e-52 208.0 125 84.8
AUR62000936 Chenopodium quinoa HOM05D004456 ORTHO05D005287 9.4e-52 206.8 125 84.0
Eucgr.B03760 Eucalyptus grandis HOM05D004456 ORTHO05D005287 1.2e-51 206.5 126 84.1
PGR073G0004 Punica granatum HOM05D004456 ORTHO05D005287 1.0e-50 203.4 126 83.3
PGR073G0005 Punica granatum HOM05D004456 ORTHO05D005287 1.0e-50 203.4 126 83.3
PGR087G0002 Punica granatum HOM05D004456 ORTHO05D005287 2.3e-50 202.2 126 82.5
PGR087G0004 Punica granatum HOM05D004456 ORTHO05D005287 2.3e-50 202.2 126 82.5
Psat2g023600 Pisum sativum HOM05D004456 ORTHO05D005287 4.0e-50 201.4 118 85.6
PGR073G0001 Punica granatum HOM05D004456 ORTHO05D005287 5.2e-50 201.1 126 82.5
PGR073G0006 Punica granatum HOM05D004456 ORTHO05D005287 1.2e-49 199.9 126 81.7
PGR142G1158 Punica granatum HOM05D004456 ORTHO05D005287 5.7e-49 197.6 126 81.0
PGR142G2513 Punica granatum HOM05D004456 ORTHO05D005287 2.2e-48 195.7 126 80.2
PGR142G0123 Punica granatum HOM05D004456 ORTHO05D005287 4.8e-48 194.5 124 81.5
PGR142G2495 Punica granatum HOM05D004456 ORTHO05D005287 4.8e-48 194.5 126 81.7
PGR142G0707 Punica granatum HOM05D004456 ORTHO05D005287 1.1e-47 193.4 126 79.4
PGR142G2293 Punica granatum HOM05D004456 ORTHO05D005287 1.4e-47 193.0 126 79.4
Nn7g36646 Nelumbo nucifera HOM05D004456 ORTHO05D005287 1.8e-47 192.6 126 81.0
Mapoly0002s0127 Marchantia polymorpha HOM05D004456 ORTHO05D005287 2.7e-46 188.7 106 84.9
PGR142G3851 Punica granatum HOM05D004456 ORTHO05D005287 2.9e-45 185.3 110 85.5
Pp3c20_1830 Physcomitrium patens HOM05D004456 ORTHO05D005287 8.5e-45 183.7 106 84.0
EL10Ac9g22335 Beta vulgaris HOM05D004456 ORTHO05D005287 3.6e-43 178.3 121 76.9
AagrBONN_evm.TU.Sc2ySwM_228.5758 Anthoceros agrestis HOM05D004456 ORTHO05D005287 3.0e-42 175.3 115 76.5
Peaxi162Scf00267g00035 Petunia axillaris HOM05D004456 ORTHO05D005287 1.7e-40 169.5 144 68.1
SMO358G0062 Selaginella moellendorffii HOM05D004456 ORTHO05D005287 1.7e-40 169.5 116 72.4
Nitab4.5_0008405g0010 Nicotiana tabacum HOM05D004456 ORTHO05D005287 7.7e-38 160.6 85 94.1
MCO12G023 Micromonas commoda HOM05D004456 ORTHO05D005287 1.9e-36 156.0 118 66.9
AagrBONN_evm.TU.Sc2ySwM_368.929 Anthoceros agrestis HOM05D004456 ORTHO05D005287 4.0e-34 148.3 93 78.5
PRCOL_00003603 Prasinoderma coloniale HOM05D004456 ORTHO05D005287 2.7e-30 135.6 100 66.0
Zm00001eb154030 Zea mays HOM05D004456 ORTHO05D005287 5.0e-29 131.3 80 80.0
Cpa.g.sc4.119 Carica papaya HOM05D004456 ORTHO05D005287 6.1e-27 124.4 65 93.8
MD07G1169200 Malus domestica HOM05D004456 ORTHO05D005287 6.1e-27 124.4 106 65.1
Cre01.g052350 Chlamydomonas reinhardtii HOM05D004456 ORTHO05D005287 5.2e-26 121.3 104 57.7
SHI24418 Sapria himalayana HOM05D004456 ORTHO05D005287 7.5e-25 117.5 64 90.6
CBR_g49054 Chara braunii HOM05D004456 ORTHO05D005287 1.3e-24 116.7 63 85.7
Nn1g08913 Nelumbo nucifera HOM05D004456 ORTHO05D005287 2.2e-24 115.9 62 90.3
QL06p000079 Quercus lobata HOM05D004456 ORTHO05D005287 6.4e-24 114.4 63 88.9
QL06p000082 Quercus lobata HOM05D004456 ORTHO05D005287 8.3e-24 114.0 63 87.3
SMO244G0037 Selaginella moellendorffii HOM05D004456 ORTHO05D005287 1.3e-21 106.7 95 56.8
SMO281G0018 Selaginella moellendorffii HOM05D004456 ORTHO05D005287 1.3e-21 106.7 95 56.8
SMO198G0083 Selaginella moellendorffii HOM05D004456 ORTHO05D005287 3.9e-21 105.1 95 55.8
EL10Ac8g19692 Beta vulgaris HOM05D004456 ORTHO05D005287 2.1e-19 99.4 63 79.4
Potri.004G095475 Populus trichocarpa HOM05D004456 ORTHO05D005287 1.3e-16 90.1 50 84.0
SHI24419 Sapria himalayana HOM05D004456 ORTHO05D005287 5.4e-15 84.7 49 83.7
Solyc09g055460.3 Solanum lycopersicum HOM05D004456 ORTHO05D005287 1.7e-13 79.7 58 72.4
EL10Ac8g19693 Beta vulgaris HOM05D004456 ORTHO05D005287 1.4e-10 70.1 39 84.6
PGR111G0084 Punica granatum HOM05D007792 ORTHO05D009931 6.4e-08 61.2 82 41.5
CAN.G1148.9 Capsicum annuum HOM05D007792 ORTHO05D009931 1.4e-07 60.1 82 41.5
CAN.G2018.13 Capsicum annuum HOM05D007792 ORTHO05D009931 1.4e-07 60.1 82 41.5
CAN.G438.83 Capsicum annuum HOM05D007792 ORTHO05D009931 1.4e-07 60.1 82 41.5
Gohir.A12G229400 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.9e-07 59.7 89 37.1
Gohir.A11G230404 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.4e-07 59.3 88 38.6
Gohir.D01G101995 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.4e-07 59.3 89 38.2
LjContig00318g0025275 Lotus japonicus HOM05D007792 ORTHO05D009931 2.4e-07 59.3 83 38.6
Gohir.D09G044333 Gossypium hirsutum HOM05D007792 ORTHO05D009931 3.2e-07 58.9 88 38.6
AL2G21630 Arabidopsis lyrata HOM05D007792 ORTHO05D009931 4.1e-07 58.5 82 39.0
ATCG00660 Arabidopsis thaliana HOM05D007792 ORTHO05D009931 4.1e-07 58.5 82 39.0
CARHR282170 Cardamine hirsuta HOM05D007792 ORTHO05D009931 4.1e-07 58.5 82 39.0
EL10Ac8g19560 Beta vulgaris HOM05D004456 ORTHO05D005287 7.1e-07 57.8 30 86.7
Phvul.002G090500 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 7.1e-07 57.8 80 40.0
MELO3C027088.2 Cucumis melo HOM05D007792 ORTHO05D009931 9.2e-07 57.4 82 39.0
MELO3C028023.2 Cucumis melo HOM05D007792 ORTHO05D009931 9.2e-07 57.4 82 39.0
DCAR_032507 Daucus carota HOM05D007792 ORTHO05D009931 1.2e-06 57.0 82 39.0
Sed0026344 Sechium edule HOM05D007792 ORTHO05D009931 1.2e-06 57.0 82 39.0
Sed0027103 Sechium edule HOM05D007792 ORTHO05D009931 1.2e-06 57.0 82 39.0
Oeu053978.1 Olea europaea HOM05D007792 ORTHO05D009931 2.1e-06 56.2 82 37.8
MELO3C028123.2 Cucumis melo HOM05D007792 ORTHO05D009931 2.7e-06 55.8 79 39.2
Oeu028775.1 Olea europaea HOM05D007792 ORTHO05D009931 2.7e-06 55.8 82 37.8
Oeu058366.1 Olea europaea HOM05D007792 ORTHO05D009931 2.7e-06 55.8 82 37.8


User provided reference genes

Program Settings