Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015165.2 Olea europaea HOM05D004305 ORTHO05D005159 2.9e-244 848.2 457 100.0
Oeu041117.1 Olea europaea HOM05D004305 ORTHO05D005159 2.3e-119 433.3 477 58.9
Oeu060316.1 Olea europaea HOM05D004305 ORTHO05D005159 1.3e-61 241.5 486 40.3
MSTRG.16299 Avicennia marina HOM05D004305 ORTHO05D005159 3.6e-56 223.4 491 36.3
MSTRG.7546 Avicennia marina HOM05D004305 ORTHO05D005159 6.9e-52 209.1 495 34.5
Migut.M01906 Erythranthe guttata HOM05D004305 ORTHO05D005159 9.7e-46 188.7 476 35.9
Lj1P1160T59 Lonicera japonica HOM05D004305 ORTHO05D005159 2.4e-36 157.5 500 34.4
Oeu040075.1 Olea europaea HOM05D004305 ORTHO05D005159 5.3e-36 156.4 363 38.6
Ciclev10015182m.g Citrus clementina HOM05D004305 ORTHO05D005159 1.6e-35 154.8 473 32.6
Cc09_g07570 Coffea canephora HOM05D004305 ORTHO05D005159 2.0e-35 154.5 472 33.7
CSS0026993 Camellia sinensis var. sinensis HOM05D004305 ORTHO05D005159 1.0e-34 152.1 486 32.7
Peaxi162Scf00395g00054 Petunia axillaris HOM05D004305 ORTHO05D005159 5.2e-31 139.8 481 31.2
PGSC0003DMG400021011 Solanum tuberosum HOM05D004305 ORTHO05D005159 7.5e-30 136.0 480 31.5
SGA_v2.0_scaffold1G00275 Striga asiatica HOM05D004305 ORTHO05D005159 1.7e-29 134.8 462 32.5
SGA_v2.0_scaffold223G42870 Striga asiatica HOM05D004305 ORTHO05D005159 3.5e-27 127.1 441 31.5
Nitab4.5_0000076g0140 Nicotiana tabacum HOM05D004305 ORTHO05D005159 5.9e-27 126.3 465 29.9
Nitab4.5_0004204g0010 Nicotiana tabacum HOM05D004305 ORTHO05D005159 1.0e-26 125.6 462 31.4
Rhsim02G0163100 Rhododendron simsii HOM05D004305 ORTHO05D005159 3.8e-26 123.6 509 30.1
Solyc02g022920.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 8.5e-26 122.5 468 29.5
PGSC0003DMG400021114 Solanum tuberosum HOM05D004305 ORTHO05D005159 9.4e-25 119.0 447 30.6
unitig_32.g10874 Utricularia gibba HOM05D004305 ORTHO05D005159 9.4e-25 119.0 441 28.3
Dinv06927 Davidia involucrata HOM05D004305 ORTHO05D005159 2.1e-24 117.9 376 31.6
FvH4_3g10700 Fragaria vesca HOM05D004305 ORTHO05D005159 2.1e-24 117.9 458 31.9
Solyc02g070040.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 2.7e-24 117.5 450 29.1
RcHm_v2.0_Chr5g0017411 Rosa chinensis HOM05D004305 ORTHO05D005159 1.0e-23 115.5 474 29.3
Atru.chr10.781 Acer truncatum HOM05D004305 ORTHO05D005159 2.3e-23 114.4 444 34.0
Sopen02g019200 Solanum pennellii HOM05D004305 ORTHO05D005159 5.2e-23 113.2 453 28.9
DCAR_003840 Daucus carota HOM05D004305 ORTHO05D005159 2.6e-22 110.9 445 29.4
Lsat_1_v5_gn_9_25860 Lactuca sativa HOM05D004305 ORTHO05D005159 2.6e-22 110.9 469 29.4
FAN16G1832 Fragaria x ananassa HOM05D004305 ORTHO05D005159 5.7e-22 109.8 456 30.7
CANSAT35G0942 Cannabis sativa HOM05D004305 ORTHO05D005159 2.2e-21 107.8 475 31.6
Sabra11G0141400 Salix brachista HOM05D004305 ORTHO05D005159 2.2e-21 107.8 463 30.2
Eucgr.D00100 Eucalyptus grandis HOM05D004305 ORTHO05D005159 3.7e-21 107.1 473 32.1
FAN11G3528 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.1e-20 105.5 476 30.5
Lj4g0027556 Lotus japonicus HOM05D004305 ORTHO05D005159 1.4e-20 105.1 481 30.6
unitig_748.g8282 Utricularia gibba HOM05D004305 ORTHO05D005159 1.4e-20 105.1 440 28.4
HanXRQChr08g0237311 Helianthus annuus HOM05D004305 ORTHO05D005159 5.4e-20 103.2 442 28.1
Sopen02g006550 Solanum pennellii HOM05D004305 ORTHO05D005159 5.4e-20 103.2 432 28.9
FAN21G2878 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.2e-19 102.1 447 30.4
Prupe.4G095400 Prunus persica HOM05D004305 ORTHO05D005159 1.0e-18 99.0 216 39.4
GSVIVG01021709001 Vitis vinifera HOM05D004305 ORTHO05D005159 1.3e-18 98.6 464 29.1
Thecc.06G003200 Theobroma cacao HOM05D004305 ORTHO05D005159 1.7e-18 98.2 453 28.5
Actinidia13459 Actinidia chinensis HOM05D004305 ORTHO05D005159 6.6e-18 96.3 404 30.4
FAN25G2552 Fragaria x ananassa HOM05D004305 ORTHO05D005159 6.6e-18 96.3 486 28.0
Nitab4.5_0001583g0210 Nicotiana tabacum HOM05D004305 ORTHO05D005159 6.6e-18 96.3 233 33.5
Sabra16G0315300 Salix brachista HOM05D004305 ORTHO05D005159 1.5e-17 95.1 469 29.0
Potri.001G464300 Populus trichocarpa HOM05D004305 ORTHO05D005159 7.2e-17 92.8 459 29.6
Lalb_Chr18g0058121 Lupinus albus HOM05D004305 ORTHO05D005159 1.2e-16 92.0 465 28.8
Actinidia31373 Actinidia chinensis HOM05D004305 ORTHO05D005159 1.6e-16 91.7 367 30.2
Sabra16G0313900 Salix brachista HOM05D004305 ORTHO05D005159 2.8e-16 90.9 466 28.5
Cfa000806 Carpinus fangiana HOM05D004305 ORTHO05D005159 4.7e-16 90.1 486 30.9
Duzib235G0167 Durio zibethinus HOM05D004305 ORTHO05D005159 4.7e-16 90.1 444 27.5
TWI15G0126 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 8.0e-16 89.4 467 29.3
Haze_05867 Corylus avellana HOM05D004305 ORTHO05D005159 1.4e-15 88.6 498 29.3
MD10G1248100 Malus domestica HOM05D004305 ORTHO05D005159 4.0e-15 87.0 517 28.6
Carub.0007s2055 Capsella rubella HOM05D004305 ORTHO05D005159 8.9e-15 85.9 458 30.1
Nn1g03508 Nelumbo nucifera HOM05D004305 ORTHO05D005159 2.6e-14 84.3 472 26.7
A03p52530 Brassica napus HOM05D004305 ORTHO05D005159 4.4e-14 83.6 458 31.0
BolC7t45599H Brassica oleracea HOM05D004305 ORTHO05D005159 4.4e-14 83.6 441 30.4
Cpa.g.c43226 Carica papaya HOM05D004305 ORTHO05D005159 4.4e-14 83.6 466 29.2
PSO675G0053 Papaver somniferum HOM05D004305 ORTHO05D005159 5.7e-14 83.2 493 25.8
BcaNung04140 Brassica carinata HOM05D004305 ORTHO05D005159 7.5e-14 82.8 442 28.7
A01p12300 Brassica napus HOM05D004305 ORTHO05D005159 9.8e-14 82.4 443 28.0
CsaV3_1G037140 Cucumis sativus L. HOM05D004305 ORTHO05D005159 1.3e-13 82.0 473 25.8
unitig_32.g11679 Utricularia gibba HOM05D004305 ORTHO05D005159 1.3e-13 82.0 160 36.9
MD05G1269300 Malus domestica HOM05D004305 ORTHO05D005159 1.7e-13 81.6 508 27.4
Medtr2g031350 Medicago truncatula HOM05D004305 ORTHO05D005159 1.7e-13 81.6 442 28.3
C01p14710 Brassica napus HOM05D004305 ORTHO05D005159 2.8e-13 80.9 458 28.6
BolC1t01423H Brassica oleracea HOM05D004305 ORTHO05D005159 2.8e-13 80.9 458 28.6
C07p50970 Brassica napus HOM05D004305 ORTHO05D005159 3.7e-13 80.5 440 29.5
MELO3C002832.2 Cucumis melo HOM05D004305 ORTHO05D005159 6.3e-13 79.7 466 26.8
unitig_748.g7348 Utricularia gibba HOM05D004305 ORTHO05D005159 6.3e-13 79.7 452 27.4
BcaB03g11678 Brassica carinata HOM05D004305 ORTHO05D005159 8.3e-13 79.3 438 27.4
BraA01t01174Z Brassica rapa HOM05D004305 ORTHO05D005159 8.3e-13 79.3 443 28.9
Potri.011G162400 Populus trichocarpa HOM05D004305 ORTHO05D005159 1.1e-12 79.0 473 29.4
AT4G20880 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 1.4e-12 78.6 440 27.5
ClCG03G008260 Citrullus lanatus HOM05D004305 ORTHO05D005159 1.4e-12 78.6 454 26.2
MBI02_g39880_MAGBIO Magnolia biondii HOM05D004305 ORTHO05D005159 1.4e-12 78.6 179 36.9
Manes.14G124700 Manihot esculenta HOM05D004305 ORTHO05D005159 1.4e-12 78.6 477 26.4
BolC3t20584H Brassica oleracea HOM05D004305 ORTHO05D005159 3.1e-12 77.4 441 28.6
BcaC09g51296 Brassica carinata HOM05D004305 ORTHO05D005159 5.4e-12 76.6 441 28.6
BcaNung07356 Brassica carinata HOM05D004305 ORTHO05D005159 5.4e-12 76.6 438 29.2
Gohir.A06G119900 Gossypium hirsutum HOM05D004305 ORTHO05D005159 5.4e-12 76.6 195 35.4
Duzib192G0088 Durio zibethinus HOM05D004305 ORTHO05D005159 7.0e-12 76.3 431 27.8
Ca_00869_v3 Cicer arietinum L. HOM05D004305 ORTHO05D005159 1.6e-11 75.1 455 27.5
ECA247G2099 Erigeron canadensis HOM05D004305 ORTHO05D005159 1.6e-11 75.1 439 25.3
Gorai.010G144500 Gossypium raimondii HOM05D004305 ORTHO05D005159 1.6e-11 75.1 195 35.4
THA.LOC104806249 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 1.6e-11 75.1 457 27.8
Sc03g0008520 Simmondsia chinensis HOM05D004305 ORTHO05D005159 2.0e-11 74.7 199 33.2
Gohir.D06G124500 Gossypium hirsutum HOM05D004305 ORTHO05D005159 2.7e-11 74.3 195 35.4
COL.COLO4_26846 Corchorus olitorius HOM05D004305 ORTHO05D005159 3.5e-11 73.9 183 35.5
MELO3C007060.2 Cucumis melo HOM05D004305 ORTHO05D005159 3.5e-11 73.9 374 29.4
QL05p063597 Quercus lobata HOM05D004305 ORTHO05D005159 4.5e-11 73.6 449 26.9
BcaNung05413 Brassica carinata HOM05D004305 ORTHO05D005159 5.9e-11 73.2 440 29.1
QL93p0201_0023 Quercus lobata HOM05D004305 ORTHO05D005159 5.9e-11 73.2 449 26.9
CsaV3_6G052500 Cucumis sativus L. HOM05D004305 ORTHO05D005159 1.0e-10 72.4 202 32.2
Manes.06G058700 Manihot esculenta HOM05D004305 ORTHO05D005159 1.3e-10 72.0 488 24.8
Oeu058488.1 Olea europaea HOM05D004305 ORTHO05D005159 1.3e-10 72.0 166 40.4
Aa31LG6G2950 Aethionema arabicum HOM05D004305 ORTHO05D005159 2.3e-10 71.2 446 25.3
AL7G33270 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 2.3e-10 71.2 456 28.5
BraA03t14328Z Brassica rapa HOM05D004305 ORTHO05D005159 2.3e-10 71.2 446 29.1
PGR083G0011 Punica granatum HOM05D004305 ORTHO05D005159 2.3e-10 71.2 197 36.0
Sp2g09190 Schrenkiella parvula HOM05D004305 ORTHO05D005159 2.3e-10 71.2 362 28.2
CARHR227440 Cardamine hirsuta HOM05D004305 ORTHO05D005159 2.9e-10 70.9 445 29.0
Psat1g165840 Pisum sativum HOM05D004305 ORTHO05D005159 2.9e-10 70.9 448 27.2
CiPaw.09G142800 Carya illinoinensis HOM05D004305 ORTHO05D005159 5.0e-10 70.1 180 37.2
Sp7g18970 Schrenkiella parvula HOM05D004305 ORTHO05D005159 5.0e-10 70.1 465 27.3
TWI38G0672 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 6.6e-10 69.7 444 26.8
BraA09t37708Z Brassica rapa HOM05D004305 ORTHO05D005159 1.5e-09 68.6 232 29.7
Psat7g094000 Pisum sativum HOM05D004305 ORTHO05D005159 1.9e-09 68.2 445 27.0
EL10Ac4g07786 Beta vulgaris HOM05D023924 ORTHO05D023401 3.3e-09 67.4 72 55.6
BcaC01g00679 Brassica carinata HOM05D004305 ORTHO05D005159 7.3e-09 66.2 441 27.7
C03p83040 Brassica napus HOM05D004305 ORTHO05D005159 7.3e-09 66.2 441 27.7
ClCG01G025280 Citrullus lanatus HOM05D004305 ORTHO05D005159 9.5e-09 65.9 463 24.8
BcaB07g30530 Brassica carinata HOM05D004305 ORTHO05D005159 1.2e-08 65.5 188 31.9
Nn1g07139 Nelumbo nucifera HOM05D004305 ORTHO05D005159 1.6e-08 65.1 176 33.0
Glyma.09G026200 Glycine max HOM05D004305 ORTHO05D005159 2.1e-08 64.7 441 27.9
Sed0024509 Sechium edule HOM05D004305 ORTHO05D005159 2.1e-08 64.7 457 25.8
VMungo0540G0062 Vigna mungo HOM05D004305 ORTHO05D005159 2.1e-08 64.7 464 24.8
Lalb_Chr07g0189031 Lupinus albus HOM05D004305 ORTHO05D005159 2.8e-08 64.3 476 25.8
A09p21070 Brassica napus HOM05D004305 ORTHO05D005159 3.6e-08 63.9 188 31.9
CARHR178780 Cardamine hirsuta HOM05D004305 ORTHO05D005159 3.6e-08 63.9 182 33.0
Thhalv10003311m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 3.6e-08 63.9 190 33.2
Thhalv10025304m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 3.6e-08 63.9 448 26.1
SHI24805 Sapria himalayana HOM05D004305 ORTHO05D005159 4.7e-08 63.5 62 54.8
Carub.0008s0412 Capsella rubella HOM05D004305 ORTHO05D005159 8.0e-08 62.8 64 51.6
Phvul.006G126000 Phaseolus vulgaris HOM05D004305 ORTHO05D005159 8.0e-08 62.8 454 26.0
AUR62014849 Chenopodium quinoa HOM05D002349 ORTHO05D002464 1.0e-07 62.4 57 61.4
Glyma.15G132400 Glycine max HOM05D004305 ORTHO05D005159 1.8e-07 61.6 461 28.9
Sed0021635 Sechium edule HOM05D004305 ORTHO05D005159 1.8e-07 61.6 73 47.9
BcaB07g30950 Brassica carinata HOM05D004305 ORTHO05D005159 4.0e-07 60.5 189 30.2
Lj6g0010125 Lotus japonicus HOM05D004305 ORTHO05D005159 4.0e-07 60.5 444 26.1
Aqoxy1G01487 Aquilegia oxysepala HOM05D004305 ORTHO05D005159 5.2e-07 60.1 59 59.3
A08p14960 Brassica napus HOM05D004305 ORTHO05D005159 5.2e-07 60.1 438 25.8
C07p27080 Brassica napus HOM05D004305 ORTHO05D005159 5.2e-07 60.1 79 45.6
BraA08t33477Z Brassica rapa HOM05D004305 ORTHO05D005159 5.2e-07 60.1 438 25.8
BolC7t43238H Brassica oleracea HOM05D004305 ORTHO05D005159 6.8e-07 59.7 79 44.3
A02p28380 Brassica napus HOM05D004305 ORTHO05D005159 1.2e-06 58.9 75 45.3
BraA02t07875Z Brassica rapa HOM05D004305 ORTHO05D005159 1.2e-06 58.9 193 30.1
BcaC06g31624 Brassica carinata HOM05D004305 ORTHO05D005159 1.5e-06 58.5 79 43.0
BcaC06g34566 Brassica carinata HOM05D004305 ORTHO05D005159 1.5e-06 58.5 79 44.3
BcaC04g21838 Brassica carinata HOM05D004305 ORTHO05D005159 2.6e-06 57.8 183 30.6
C09p26810 Brassica napus HOM05D004305 ORTHO05D005159 2.6e-06 57.8 183 30.6
BraA06t27598Z Brassica rapa HOM05D004305 ORTHO05D005159 2.6e-06 57.8 106 42.5
CDE02G2479 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 3.4e-06 57.4 183 28.4
BcaC03g16656 Brassica carinata HOM05D004305 ORTHO05D005159 9.8e-06 55.8 182 29.1
A06p47270 Brassica napus HOM05D004305 ORTHO05D005159 9.8e-06 55.8 65 50.8


User provided reference genes

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