Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015050.1 Olea europaea HOM05D006190 ORTHO05D008260 1.1e-186 656.4 318 100.0
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 1.0e-142 510.4 316 78.2
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 7.3e-141 504.2 312 78.8
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 7.3e-141 504.2 312 77.6
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 6.4e-129 464.5 313 71.9
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 1.6e-127 459.9 321 70.7
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 5.0e-126 454.9 316 70.9
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 1.1e-125 453.8 316 70.6
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 1.1e-123 447.2 317 67.5
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 2.6e-122 442.6 321 67.6
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 3.4e-122 442.2 324 67.3
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 7.5e-122 441.0 321 66.0
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 7.5e-122 441.0 322 66.1
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 9.9e-122 440.7 321 67.0
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 9.9e-122 440.7 317 67.2
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 2.2e-121 439.5 321 66.7
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 4.9e-121 438.3 317 66.9
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 6.4e-121 438.0 321 65.7
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 1.4e-120 436.8 321 66.7
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 2.4e-120 436.0 313 65.5
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 7.1e-120 434.5 322 66.8
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 2.1e-119 433.0 321 65.1
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 2.7e-119 432.6 347 62.8
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 1.0e-118 430.6 317 66.2
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 2.3e-118 429.5 321 65.4
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 6.6e-118 427.9 317 64.7
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 8.6e-118 427.6 322 65.5
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 1.9e-117 426.4 322 66.1
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 3.3e-117 425.6 318 65.1
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 3.3e-117 425.6 325 64.6
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 2.1e-116 422.9 319 65.2
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 2.1e-116 422.9 317 64.7
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 2.8e-116 422.5 321 62.9
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 3.6e-116 422.2 324 65.1
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.6e-116 422.2 326 65.3
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.4e-115 420.2 326 65.0
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.4e-115 420.2 317 64.4
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 2.4e-115 419.5 318 63.2
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 5.2e-115 418.3 324 63.9
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 6.8e-115 417.9 321 63.6
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 1.2e-114 417.2 316 65.5
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 1.2e-114 417.2 320 61.2
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 2.0e-114 416.4 321 65.4
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 2.0e-114 416.4 318 62.6
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 4.4e-114 415.2 321 64.2
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 4.4e-114 415.2 317 64.0
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 9.9e-114 414.1 321 63.2
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 2.2e-113 412.9 321 62.6
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 4.9e-113 411.8 321 64.5
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 4.9e-113 411.8 321 62.6
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 6.4e-113 411.4 319 63.6
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 1.4e-112 410.2 321 64.2
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 1.4e-112 410.2 322 63.4
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 1.4e-112 410.2 324 62.3
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 2.4e-112 409.5 321 63.9
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 5.4e-112 408.3 312 66.3
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 7.1e-112 407.9 321 63.6
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 7.1e-112 407.9 318 61.9
A05p14270 Brassica napus HOM05D006190 ORTHO05D008260 2.7e-111 406.0 323 63.5
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 6.0e-111 404.8 321 62.9
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 1.0e-110 404.1 321 60.7
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 1.2e-108 397.1 319 60.2
unitig_46.g18456 Utricularia gibba HOM05D006190 ORTHO05D008260 2.1e-108 396.4 316 63.0
TAR020G0003 Trochodendron aralioides HOM05D006190 ORTHO05D008260 1.4e-107 393.7 318 60.7
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 4.0e-107 392.1 313 63.6
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 9.0e-107 391.0 318 61.3
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 1.5e-106 390.2 317 60.3
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 5.8e-106 388.3 320 59.1
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 4.9e-105 385.2 321 59.2
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 6.4e-105 384.8 318 58.2
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 4.2e-104 382.1 322 58.1
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 1.7e-102 376.7 327 58.4
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 1.5e-101 373.6 321 57.3
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 4.3e-101 372.1 322 56.8
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 5.6e-101 371.7 296 61.5
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 5.6e-101 371.7 322 57.8
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 8.1e-100 367.9 322 57.5
SHI10054 Sapria himalayana HOM05D006190 ORTHO05D000001 7.6e-98 361.3 320 56.2
CAN.G795.2 Capsicum annuum HOM05D006190 ORTHO05D008260 1.7e-97 360.1 263 68.4
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 5.4e-96 355.1 322 55.3
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 2.1e-95 353.2 330 54.5
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 4.6e-95 352.1 318 56.0
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 8.1e-92 341.3 318 54.7
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 8.1e-92 341.3 318 54.7
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 1.1e-91 340.9 312 55.1
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 1.5e-85 320.5 317 48.9
CARHR124960 Cardamine hirsuta HOM05D006190 ORTHO05D008260 1.9e-85 320.1 268 61.2
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 4.3e-85 318.9 266 60.2
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 8.2e-84 314.7 265 60.0
Psat5g111240 Pisum sativum HOM05D006190 ORTHO05D008260 4.0e-83 312.4 281 55.5
FAN18G3300 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.1e-80 304.3 258 61.2
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 1.9e-80 303.5 268 57.5
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 7.1e-80 301.6 262 58.4
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 2.8e-76 289.7 322 46.3
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 1.3e-73 280.8 318 45.3
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 8.2e-68 261.5 214 62.6
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 3.1e-67 259.6 329 44.7
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 1.2e-63 247.7 214 58.4
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 4.7e-63 245.7 214 58.9
Sopen11g022430 Solanum pennellii HOM05D006190 ORTHO05D008260 1.0e-62 244.6 208 59.1
C04p19010 Brassica napus HOM05D006190 ORTHO05D008260 3.0e-54 216.5 172 62.8
THA.LOC104822845 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 5.7e-53 212.2 141 68.1
Pp3c23_22000 Physcomitrium patens HOM05D006190 ORTHO05D008260 9.4e-40 168.3 360 33.1
FAN10G3459 Fragaria x ananassa HOM05D006190 ORTHO05D008260 4.7e-31 139.4 151 52.3
Mapoly0014s0084 Marchantia polymorpha HOM05D006190 ORTHO05D008260 6.1e-31 139.0 343 27.4
Aa31sc34G90 Aethionema arabicum HOM05D006190 ORTHO05D008260 3.9e-17 93.2 72 61.1
Psat5g111200 Pisum sativum HOM05D006190 ORTHO05D008260 4.7e-15 86.3 53 69.8
CBR_g25881 Chara braunii HOM05D006190 ORTHO05D008260 8.9e-14 82.0 120 34.2
CDE07G0814 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 5.8e-13 79.3 53 58.5
CDE04G2645 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 2.2e-12 77.4 122 37.7
Sabra14G0120600 Salix brachista HOM05D006190 ORTHO05D008260 6.4e-12 75.9 54 63.0
BcaC01g05961 Brassica carinata HOM05D006190 ORTHO05D008260 2.7e-10 70.5 91 45.1


User provided reference genes

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