Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014974.1 Olea europaea HOM05D006960 ORTHO05D008699 9.4e-215 750.0 393 100.0
Oeu007886.1 Olea europaea HOM05D006960 ORTHO05D008699 3.7e-187 658.3 345 100.0
MSTRG.17349 Avicennia marina HOM05D006960 ORTHO05D008699 3.6e-89 332.8 235 74.5
PGSC0003DMG400007011 Solanum tuberosum HOM05D006960 ORTHO05D008699 1.7e-83 313.9 236 72.0
Sopen05g029010 Solanum pennellii HOM05D006960 ORTHO05D008699 2.2e-83 313.5 236 70.8
Migut.B01880 Erythranthe guttata HOM05D006960 ORTHO05D008699 6.5e-83 312.0 242 71.1
Nitab4.5_0000258g0220 Nicotiana tabacum HOM05D006960 ORTHO05D008699 1.5e-82 310.8 236 73.3
Solyc05g050570.3 Solanum lycopersicum HOM05D006960 ORTHO05D008699 2.1e-81 307.0 233 70.4
Nitab4.5_0004506g0020 Nicotiana tabacum HOM05D006960 ORTHO05D008699 4.7e-81 305.8 236 72.0
CAN.G1178.29 Capsicum annuum HOM05D006960 ORTHO05D008699 6.8e-80 302.0 237 70.0
CSS0036785 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 1.5e-79 300.8 236 69.5
Actinidia20248 Actinidia chinensis HOM05D000567 ORTHO05D001981 2.6e-79 300.1 224 69.6
CSS0028122 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 7.5e-79 298.5 236 68.6
SalBow3G0783 Salvia bowleyana HOM05D006960 ORTHO05D008699 1.6e-76 290.8 234 67.5
ECA236G0577 Erigeron canadensis HOM05D006960 ORTHO05D008699 7.7e-76 288.5 236 68.2
DCAR_021504 Daucus carota HOM05D006960 ORTHO05D008699 1.3e-75 287.7 238 68.9
TAR629G1073 Trochodendron aralioides HOM05D006960 ORTHO05D008699 8.6e-75 285.0 236 67.4
Lsat_1_v5_gn_8_13101 Lactuca sativa HOM05D006960 ORTHO05D008699 9.5e-74 281.6 240 65.0
Atru.chr5.678 Acer truncatum HOM05D006960 ORTHO05D008699 1.2e-73 281.2 236 65.7
Cc01_g12480 Coffea canephora HOM05D006960 ORTHO05D008699 4.7e-73 279.3 238 63.4
Peaxi162Scf00716g00022 Petunia axillaris HOM05D006960 ORTHO05D008699 8.0e-73 278.5 201 73.1
vmacro12673 Vaccinium macrocarpon HOM05D006960 ORTHO05D008699 8.0e-73 278.5 238 65.1
CAN.G1385.4 Capsicum annuum HOM05D006960 ORTHO05D008699 1.4e-72 277.7 198 74.7
Rhsim01G0172900 Rhododendron simsii HOM05D006960 ORTHO05D008699 1.4e-72 277.7 236 66.1
Haze_15666 Corylus avellana HOM05D000451 ORTHO05D000351 2.3e-72 276.9 217 67.7
Aqoxy6G00316 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 3.0e-72 276.6 236 65.7
HanXRQChr06g0170731 Helianthus annuus HOM05D006960 ORTHO05D008699 8.8e-72 275.0 219 67.6
Rhsim04G0222700 Rhododendron simsii HOM05D006960 ORTHO05D008699 8.8e-72 275.0 236 65.7
SGA_v2.0_scaffold22G09984 Striga asiatica HOM05D006960 ORTHO05D008699 1.2e-71 274.6 235 65.1
CANSAT56G1276 Cannabis sativa HOM05D006960 ORTHO05D008699 1.5e-71 274.2 236 64.4
Ciclev10022060m.g Citrus clementina HOM05D006960 ORTHO05D008699 3.4e-71 273.1 220 65.5
Lalb_Chr06g0163941 Lupinus albus HOM05D006960 ORTHO05D008699 4.4e-71 272.7 232 65.1
GSVIVG01027159001 Vitis vinifera HOM05D006960 ORTHO05D008699 4.4e-71 272.7 227 67.4
Prupe.2G189500 Prunus persica HOM05D006960 ORTHO05D008699 9.8e-71 271.6 236 63.1
QL04p060559 Quercus lobata HOM05D006960 ORTHO05D008699 2.2e-70 270.4 235 66.0
FAN10G0984 Fragaria x ananassa HOM05D006960 ORTHO05D008699 8.3e-70 268.5 240 63.3
ClCG09G009460 Citrullus lanatus HOM05D006960 ORTHO05D008699 1.4e-69 267.7 218 65.6
FvH4_7g16680 Fragaria vesca HOM05D006960 ORTHO05D008699 1.4e-69 267.7 240 63.3
FAN06G3195 Fragaria x ananassa HOM05D006960 ORTHO05D008699 2.4e-69 266.9 240 62.9
FAN01G3090 Fragaria x ananassa HOM05D006960 ORTHO05D008699 4.1e-69 266.2 240 62.9
MD07G1150800 Malus domestica HOM05D006960 ORTHO05D008699 4.1e-69 266.2 237 63.3
Sed0021558 Sechium edule HOM05D006960 ORTHO05D008699 4.1e-69 266.2 219 65.3
TWI14G0597 Tripterygium wilfordii HOM05D006960 ORTHO05D008699 4.1e-69 266.2 242 59.9
FAN10G4095 Fragaria x ananassa HOM05D006960 ORTHO05D008699 7.0e-69 265.4 213 67.1
PSO063G6262 Papaver somniferum HOM05D006960 ORTHO05D008699 7.0e-69 265.4 236 61.0
Glyma.20G102700 Glycine max HOM05D006960 ORTHO05D008699 9.2e-69 265.0 232 63.8
FAN06G2002 Fragaria x ananassa HOM05D006960 ORTHO05D008699 2.7e-68 263.5 239 61.9
MELO3C024139.2 Cucumis melo HOM05D006960 ORTHO05D008699 3.5e-68 263.1 218 64.7
Dinv22299 Davidia involucrata HOM05D006960 ORTHO05D008699 3.5e-68 263.1 220 66.4
PGR142G3971 Punica granatum HOM05D006960 ORTHO05D008699 5.9e-68 262.3 242 62.0
Cpa.g.sc46.111 Carica papaya HOM05D006960 ORTHO05D008699 7.8e-68 261.9 222 65.3
Lj5g0001318 Lotus japonicus HOM05D006960 ORTHO05D008699 1.0e-67 261.5 231 64.5
VMungo0720G2201 Vigna mungo HOM05D006960 ORTHO05D008699 1.0e-67 261.5 217 66.8
Potri.014G099500 Populus trichocarpa HOM05D006960 ORTHO05D008699 1.7e-67 260.8 251 58.6
Sc01g0002630 Simmondsia chinensis HOM05D000016 ORTHO05D007083 1.7e-67 260.8 219 63.5
Gohir.D11G102000 Gossypium hirsutum HOM05D006960 ORTHO05D008699 2.9e-67 260.0 255 59.6
Manes.05G022300 Manihot esculenta HOM05D006960 ORTHO05D008699 2.9e-67 260.0 254 58.7
Gorai.007G109000 Gossypium raimondii HOM05D006960 ORTHO05D008699 3.8e-67 259.6 256 59.0
RcHm_v2.0_Chr1g0359831 Rosa chinensis HOM05D006960 ORTHO05D008699 1.1e-66 258.1 237 61.6
COL.COLO4_21448 Corchorus olitorius HOM05D006960 ORTHO05D008699 2.5e-66 256.9 257 57.6
Phvul.007G014400 Phaseolus vulgaris HOM05D006960 ORTHO05D008699 2.5e-66 256.9 217 66.4
Eucgr.E00049 Eucalyptus grandis HOM05D006960 ORTHO05D008699 3.3e-66 256.5 236 61.0
unitig_899.g14796 Utricularia gibba HOM05D006960 ORTHO05D008699 3.3e-66 256.5 202 69.8
Thecc.01G341400 Theobroma cacao HOM05D006960 ORTHO05D008699 4.3e-66 256.1 255 58.0
Medtr5g015740 Medicago truncatula HOM05D006960 ORTHO05D008699 5.6e-66 255.8 237 62.0
Gohir.A11G097200 Gossypium hirsutum HOM05D006960 ORTHO05D008699 7.3e-66 255.4 250 59.6
EL10Ac1g00259 Beta vulgaris HOM05D006960 ORTHO05D008699 9.5e-66 255.0 217 61.8
Psat6g234040 Pisum sativum HOM05D006960 ORTHO05D008699 3.6e-65 253.1 232 61.6
Medtr1g114590 Medicago truncatula HOM05D006960 ORTHO05D008699 8.0e-65 251.9 237 61.2
AUR62004502 Chenopodium quinoa HOM05D006960 ORTHO05D008699 1.4e-64 251.1 220 60.0
PSO170G4910 Papaver somniferum HOM05D006960 ORTHO05D008699 1.8e-64 250.8 208 63.0
Zm00001eb080710 Zea mays HOM05D006960 ORTHO05D008699 1.8e-64 250.8 205 66.8
Ca_11259_v3 Cicer arietinum L. HOM05D006960 ORTHO05D008699 2.3e-64 250.4 232 61.6
Aqoxy3G01066 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 2.0e-63 247.3 200 66.5
Sabra14G0073000 Salix brachista HOM05D006960 ORTHO05D008699 5.7e-63 245.7 221 62.4
Nn8g41032 Nelumbo nucifera HOM05D006960 ORTHO05D008699 1.7e-62 244.2 202 67.3
Hund16718 Selenicereus undatus HOM05D006960 ORTHO05D008699 8.3e-62 241.9 217 59.4
BraA09t42243Z Brassica rapa HOM05D006960 ORTHO05D008699 4.1e-61 239.6 244 57.8
MBI06_g44795_MAGBIO Magnolia biondii HOM05D006960 ORTHO05D008699 4.1e-61 239.6 198 65.2
Os04g0460500 Oryza sativa ssp. japonica HOM05D006960 ORTHO05D008699 7.0e-61 238.8 205 64.4
TPR.G4075 Trifolium pratense HOM05D006960 ORTHO05D008699 1.6e-60 237.7 220 60.9
BolC8t52877H Brassica oleracea HOM05D006960 ORTHO05D008699 2.0e-60 237.3 244 57.8
Thhalv10008544m.g Eutrema salsugineum HOM05D006960 ORTHO05D008699 3.0e-59 233.4 248 55.2
AT1G01290 Arabidopsis thaliana HOM05D006960 ORTHO05D008699 5.0e-59 232.6 269 50.6
Carub.0001s0093 Capsella rubella HOM05D006960 ORTHO05D008699 5.0e-59 232.6 231 56.7
C08p53630 Brassica napus HOM05D006960 ORTHO05D008699 8.6e-59 231.9 238 56.3
A09p69060 Brassica napus HOM05D006960 ORTHO05D008699 7.3e-58 228.8 238 55.9
Aa31LG5G970 Aethionema arabicum HOM05D000451 ORTHO05D000351 2.8e-57 226.9 207 59.9
CARHR001180 Cardamine hirsuta HOM05D006960 ORTHO05D008699 3.6e-57 226.5 256 53.9
Sp1g01000 Schrenkiella parvula HOM05D006960 ORTHO05D008699 1.1e-56 224.9 248 54.4
AL1G11170 Arabidopsis lyrata HOM05D006960 ORTHO05D008699 2.3e-56 223.8 176 66.5
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 2.3e-56 223.8 185 65.4
arahy.Tifrunner.gnm1.ann1.CCVT8N Arachis hypogaea HOM05D006960 ORTHO05D008699 1.5e-55 221.1 229 56.8
ATR0602G026 Amborella trichopoda HOM05D006960 ORTHO05D008699 7.0e-53 212.2 197 59.4
HPP92_002925 Vanilla planifolia HOM05D006960 ORTHO05D008699 4.6e-52 209.5 159 66.0
Mapoly0053s0024 Marchantia polymorpha HOM05D006960 ORTHO05D008699 4.9e-46 189.5 233 50.2
SMO351G0341 Selaginella moellendorffii HOM05D006960 ORTHO05D008699 4.9e-46 189.5 194 57.2
Pp3c20_11370 Physcomitrium patens HOM05D006960 ORTHO05D008699 9.2e-45 185.3 235 47.7
AUR62014969 Chenopodium quinoa HOM05D006960 ORTHO05D008699 1.1e-40 171.8 218 45.9
MCO01G113 Micromonas commoda HOM05D006960 ORTHO05D008699 5.4e-37 159.5 157 54.1
Cre08.g361050 Chlamydomonas reinhardtii HOM05D006960 ORTHO05D008699 7.1e-37 159.1 181 49.2
CBR_g23014 Chara braunii HOM05D006960 ORTHO05D008699 1.2e-36 158.3 171 52.6
CsaV3_7G025390 Cucumis sativus L. HOM05D006960 ORTHO05D008699 3.5e-36 156.8 147 59.2
HPP92_028636 Vanilla planifolia HOM05D006960 ORTHO05D008699 1.3e-35 154.8 220 45.5
CDE10G0236 Ceratophyllum demersum HOM05D006960 ORTHO05D008699 3.9e-35 153.3 241 43.2
AUR62023452 Chenopodium quinoa HOM05D000040 ORTHO05D000759 1.8e-32 144.4 196 44.4
VMungo0964G0001 Vigna mungo HOM05D006960 ORTHO05D008699 5.2e-32 142.9 157 47.1
CDE10G0916 Ceratophyllum demersum HOM05D000108 ORTHO05D001781 1.4e-29 134.8 112 61.6
FAN03G0019 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.0e-27 128.6 95 66.3
Oeu029715.1 Olea europaea HOM05D000119 ORTHO05D000054 1.9e-26 124.4 72 90.3
Cfa022703 Carpinus fangiana HOM05D006960 ORTHO05D008699 1.1e-21 108.6 159 44.7
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 6.0e-20 102.8 116 44.8
Cpa.g.sc96.27 Carica papaya HOM05D006960 ORTHO05D008699 1.3e-17 95.1 151 42.4
TAR636G2744 Trochodendron aralioides HOM05D006960 ORTHO05D008699 2.8e-17 94.0 111 50.5
CiPaw.01G076800 Carya illinoinensis HOM05D006960 ORTHO05D008699 3.7e-17 93.6 117 52.1
PRCOL_00000953 Prasinoderma coloniale HOM05D006960 ORTHO05D008699 9.0e-16 89.0 217 32.3
Medtr5g015730 Medicago truncatula HOM05D006960 ORTHO05D008699 1.5e-07 61.6 36 83.3


User provided reference genes

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