Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 1.9e-92 342.4 164 100.0
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 3.7e-32 142.1 138 54.3
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 4.9e-32 141.7 130 56.2
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 1.1e-31 140.6 150 49.3
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 1.9e-31 139.8 147 51.0
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 1.9e-31 139.8 145 50.3
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 1.9e-31 139.8 151 48.3
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 1.9e-31 139.8 153 50.3
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 9.2e-31 137.5 139 52.5
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.2e-30 137.1 151 49.7
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.6e-30 136.7 155 49.0
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 3.5e-30 135.6 165 47.9
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 6.0e-30 134.8 143 52.4
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 1.7e-29 133.3 155 46.5
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 1.7e-29 133.3 151 49.0
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 3.9e-29 132.1 140 50.7
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 5.0e-29 131.7 150 48.7
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 1.1e-28 130.6 154 47.4
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 1.1e-28 130.6 166 45.2
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 1.9e-28 129.8 145 50.3
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 4.3e-28 128.6 149 48.3
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 7.3e-28 127.9 180 42.2
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 9.5e-28 127.5 181 42.0
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 1.6e-27 126.7 129 54.3
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 3.6e-27 125.6 165 43.6
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 6.2e-27 124.8 147 48.3
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 1.1e-26 124.0 165 46.1
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.4e-26 123.6 138 47.8
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 1.8e-26 123.2 138 51.4
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 1.8e-26 123.2 161 46.0
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 2.3e-26 122.9 130 49.2
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 2.3e-26 122.9 148 47.3
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 3.1e-26 122.5 148 43.9
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 4.0e-26 122.1 140 49.3
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 4.0e-26 122.1 134 48.5
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 5.2e-26 121.7 148 50.0
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 6.8e-26 121.3 146 43.8
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 8.9e-26 120.9 123 51.2
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 1.2e-25 120.6 142 47.9
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 1.5e-25 120.2 153 45.1
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 1.5e-25 120.2 160 43.8
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 2.6e-25 119.4 154 42.2
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 2.6e-25 119.4 145 49.0
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 3.4e-25 119.0 144 47.2
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 3.4e-25 119.0 153 43.1
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 3.4e-25 119.0 153 43.1
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 3.4e-25 119.0 152 44.7
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 4.4e-25 118.6 144 47.9
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 5.8e-25 118.2 150 44.7
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 7.5e-25 117.9 154 40.3
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.3e-24 117.1 141 48.2
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 1.3e-24 117.1 141 48.2
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 1.3e-24 117.1 141 45.4
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 2.2e-24 116.3 151 43.7
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 2.2e-24 116.3 174 39.7
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 2.2e-24 116.3 144 43.8
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.9e-24 115.9 169 39.6
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 3.7e-24 115.5 143 44.1
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 4.9e-24 115.2 136 48.5
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 4.9e-24 115.2 150 40.7
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 8.3e-24 114.4 137 46.7
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 4.1e-23 112.1 149 44.3
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 9.2e-23 110.9 144 40.3
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 9.2e-23 110.9 144 43.1
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 1.2e-22 110.5 152 39.5
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 2.7e-22 109.4 145 43.4
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 1.0e-21 107.5 145 41.4
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.0e-21 107.5 184 37.0
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 1.0e-21 107.5 145 42.8
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.3e-21 106.3 143 41.3
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 3.0e-21 105.9 155 42.6
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 3.0e-21 105.9 156 42.9
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 3.9e-21 105.5 119 45.4
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 3.9e-21 105.5 154 37.7
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 6.6e-21 104.8 164 37.8
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 6.6e-21 104.8 150 40.0
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 8.6e-21 104.4 152 39.5
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 8.6e-21 104.4 152 44.1
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 1.1e-20 104.0 163 42.3
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 1.1e-20 104.0 163 42.3
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 1.5e-20 103.6 163 42.3
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 1.5e-20 103.6 162 37.0
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 2.5e-20 102.8 165 37.6
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.5e-20 102.8 173 36.4
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 4.3e-20 102.1 151 41.7
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 4.3e-20 102.1 151 38.4
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 5.6e-20 101.7 162 36.4
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 7.3e-20 101.3 169 39.1
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 7.3e-20 101.3 152 40.8
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 9.5e-20 100.9 122 45.1
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 9.5e-20 100.9 150 41.3
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 9.5e-20 100.9 150 41.3
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 9.5e-20 100.9 170 36.5
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 1.6e-19 100.1 129 43.4
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 2.1e-19 99.8 151 38.4
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 2.8e-19 99.4 143 39.9
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 2.8e-19 99.4 166 36.7
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 3.6e-19 99.0 153 40.5
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 4.7e-19 98.6 151 41.1
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 1.4e-18 97.1 173 38.7
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 1.8e-18 96.7 125 42.4
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 2.4e-18 96.3 181 34.8
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 3.1e-18 95.9 132 41.7
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 4.0e-18 95.5 143 40.6
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 5.2e-18 95.1 116 44.0
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 8.9e-18 94.4 154 35.7
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 8.9e-18 94.4 170 35.9
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 4.4e-17 92.0 161 39.1
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 1.3e-16 90.5 190 30.0
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 1.7e-16 90.1 188 31.4
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 2.9e-16 89.4 123 43.9
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 2.9e-16 89.4 147 37.4
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 6.4e-16 88.2 189 30.7
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 2.4e-15 86.3 169 34.3
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 1.2e-14 84.0 68 54.4
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 1.2e-14 84.0 131 37.4
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 1.6e-14 83.6 185 31.9
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 3.5e-14 82.4 184 31.0
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 3.9e-13 79.0 207 30.4
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 1.1e-12 77.4 175 28.0
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.6e-11 73.6 179 27.4
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 3.6e-11 72.4 78 47.4
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 4.7e-11 72.0 126 34.9
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 6.2e-11 71.6 127 35.4
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 8.1e-11 71.2 128 35.2
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 4.0e-10 68.9 147 34.7
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 2.0e-09 66.6 123 34.1
Duzib147G0144 Durio zibethinus HOM05D005169 ORTHO05D006436 4.9e-08 62.0 118 38.1
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 6.4e-08 61.6 71 38.0
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 6.4e-08 61.6 71 38.0
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 6.4e-08 61.6 128 30.5
SEGI_22807 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 8.4e-08 61.2 130 30.0
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 1.1e-07 60.8 130 34.6
MD09G1031300 Malus domestica HOM05D005169 ORTHO05D006436 7.1e-07 58.2 96 42.7
SEGI_19138 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 4.6e-06 55.5 141 28.4
Phvul.004G012300 Phaseolus vulgaris HOM05D005169 ORTHO05D006436 6.0e-06 55.1 123 30.9


User provided reference genes

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