Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 4.0e-137 491.5 264 100.0
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 7.8e-48 194.9 311 41.8
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.3e-47 194.1 311 41.8
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 2.8e-45 186.4 295 44.1
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 1.1e-44 184.5 274 43.8
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 2.3e-39 166.8 317 41.6
MSTRG.7356 Avicennia marina HOM05D007160 ORTHO05D005331 2.5e-38 163.3 286 46.2
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.8e-35 152.1 271 45.4
SalBow7G0780 Salvia bowleyana HOM05D007160 ORTHO05D005331 3.9e-31 139.4 264 39.4
SalBow7G0182 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.9e-30 137.1 264 39.0
Migut.H01472 Erythranthe guttata HOM05D007160 ORTHO05D005331 2.1e-29 133.7 268 41.8
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 2.1e-24 117.1 154 47.4
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.6e-24 115.9 270 36.7
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 1.5e-22 110.9 315 34.6
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 2.5e-22 110.2 244 34.0
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 2.5e-22 110.2 363 35.0
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 4.3e-22 109.4 285 34.0
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 9.6e-22 108.2 280 35.0
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 4.8e-21 105.9 339 34.8
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 8.1e-21 105.1 303 32.3
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.4e-20 104.4 270 34.8
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 5.3e-20 102.4 274 33.2
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 5.3e-20 102.4 284 33.8
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 1.2e-19 101.3 252 38.9
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 1.5e-19 100.9 337 32.9
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 2.6e-19 100.1 346 32.7
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 3.4e-19 99.8 151 43.0
unitig_8.g3362 Utricularia gibba HOM05D020686 ORTHO05D005331 7.6e-19 98.6 248 39.1
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.0e-18 98.2 269 36.1
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.0e-18 98.2 269 36.1
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 2.2e-18 97.1 131 46.6
unitig_749.g13658 Utricularia gibba HOM05D020686 ORTHO05D005331 4.9e-18 95.9 248 32.3
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 6.5e-18 95.5 268 32.1
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 8.4e-18 95.1 121 48.8
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.9e-17 94.0 257 40.1
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.5e-17 92.4 120 48.3
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 7.1e-17 92.0 235 34.0
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 9.3e-17 91.7 123 48.8
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 3.5e-16 89.7 358 31.8
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 4.6e-16 89.4 308 34.1
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 4.6e-16 89.4 271 32.5
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 6.0e-16 89.0 246 40.2
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 7.9e-16 88.6 248 35.9
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-15 88.2 120 45.8
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 1.8e-15 87.4 273 37.0
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 2.3e-15 87.0 138 40.6
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.3e-15 87.0 320 35.9
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 3.9e-15 86.3 235 32.8
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 5.1e-15 85.9 262 37.4
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.1e-15 85.9 123 47.2
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.1e-15 85.9 124 46.0
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 6.7e-15 85.5 279 34.4
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 8.7e-15 85.1 299 33.8
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 3.3e-14 83.2 290 32.8
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 9.6e-14 81.6 252 35.7
unitig_26.g9356 Utricularia gibba HOM05D020686 ORTHO05D005331 1.3e-13 81.3 259 32.4
SGA_v2.0_scaffold112G31666 Striga asiatica HOM05D007160 ORTHO05D005331 1.6e-13 80.9 254 31.9
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 6.3e-13 79.0 273 30.4
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 8.2e-13 78.6 244 31.1
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 8.2e-13 78.6 292 30.8
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 1.1e-12 78.2 298 32.9
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 1.1e-12 78.2 267 36.3
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.4e-12 77.8 73 53.4
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 1.8e-12 77.4 268 31.7
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 2.4e-12 77.0 264 37.1
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 4.1e-12 76.3 244 35.2
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 5.3e-12 75.9 319 31.7
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 9.0e-12 75.1 73 52.1
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 2.6e-11 73.6 229 31.4
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 2.6e-11 73.6 241 33.2
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 3.4e-11 73.2 301 32.2
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 3.4e-11 73.2 94 48.9
Manes.12G089700 Manihot esculenta HOM05D008876 ORTHO05D010747 3.4e-11 73.2 277 32.9
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 4.5e-11 72.8 272 31.2
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 4.5e-11 72.8 158 40.5
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 5.9e-11 72.4 267 28.8
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 7.6e-11 72.0 293 27.6
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 7.6e-11 72.0 277 31.0
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 1.0e-10 71.6 351 31.9
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 1.0e-10 71.6 325 32.6
unitig_744.g24538 Utricularia gibba HOM05D020686 ORTHO05D005331 1.0e-10 71.6 270 28.5
unitig_22.g6750 Utricularia gibba HOM05D020686 ORTHO05D005331 1.3e-10 71.2 282 28.7
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 6.5e-10 68.9 92 46.7
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 6.5e-10 68.9 92 46.7
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 6.5e-10 68.9 275 30.9
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 8.5e-10 68.6 148 37.8
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 1.1e-09 68.2 260 33.8
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 1.4e-09 67.8 308 31.5
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 1.4e-09 67.8 289 32.2
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 1.9e-09 67.4 381 27.6
Sp4g16260 Schrenkiella parvula HOM05D009159 ORTHO05D005331 2.5e-09 67.0 273 28.9
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 3.2e-09 66.6 147 32.7
unitig_21.g20214 Utricularia gibba HOM05D020686 ORTHO05D005331 4.2e-09 66.2 241 30.3
C03p75110 Brassica napus HOM05D009159 ORTHO05D005331 9.3e-09 65.1 300 29.7
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 9.3e-09 65.1 275 28.7
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 1.2e-08 64.7 243 31.3
PSO832G0372 Papaver somniferum HOM05D025247 ORTHO05D050219 1.2e-08 64.7 302 29.1
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 1.6e-08 64.3 132 34.8
PSO210G1528 Papaver somniferum HOM05D025247 ORTHO05D050219 6.1e-08 62.4 297 28.3
Lalb_Chr09g0327841 Lupinus albus HOM05D007160 ORTHO05D005331 7.9e-08 62.0 366 26.0
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 7.9e-08 62.0 312 32.7
Thhalv10017182m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 1.8e-07 60.8 269 26.8
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 1.8e-07 60.8 379 25.1
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 3.0e-07 60.1 299 34.4
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 3.0e-07 60.1 299 34.4
Thhalv10008366m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 3.9e-07 59.7 288 28.1
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 3.9e-07 59.7 230 35.7
AL4G29650 Arabidopsis lyrata HOM05D009159 ORTHO05D005331 5.1e-07 59.3 276 31.9
BcaC01g00047 Brassica carinata HOM05D009159 ORTHO05D005331 5.1e-07 59.3 304 28.9
BolC3t19771H Brassica oleracea HOM05D009159 ORTHO05D005331 5.1e-07 59.3 304 28.9
Dinv06861 Davidia involucrata HOM05D008876 ORTHO05D010747 5.1e-07 59.3 249 33.3
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 6.7e-07 58.9 283 26.9
Dinv01518 Davidia involucrata HOM05D008876 ORTHO05D010747 8.7e-07 58.5 281 28.1
THA.LOC104820566 Tarenaya hassleriana HOM05D009159 ORTHO05D005331 8.7e-07 58.5 235 29.4
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 1.5e-06 57.8 143 35.0
BcaB03g12106 Brassica carinata HOM05D009159 ORTHO05D005331 1.5e-06 57.8 294 27.6
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 1.9e-06 57.4 268 31.3
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 1.9e-06 57.4 257 35.0
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 1.9e-06 57.4 346 29.5
A08p25580 Brassica napus HOM05D009159 ORTHO05D005331 2.5e-06 57.0 245 28.6
BraA08t34510Z Brassica rapa HOM05D009159 ORTHO05D005331 2.5e-06 57.0 245 28.6
Nn1g04227 Nelumbo nucifera HOM05D018497 ORTHO05D021348 3.3e-06 56.6 119 33.6
Sc23g0001700 Simmondsia chinensis HOM05D028926 ORTHO05D005331 4.3e-06 56.2 287 28.2
CARHR128000 Cardamine hirsuta HOM05D009159 ORTHO05D005331 5.7e-06 55.8 259 28.2
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 7.4e-06 55.5 211 28.0
Medtr2g090660 Medicago truncatula HOM05D008876 ORTHO05D010747 9.7e-06 55.1 277 28.5


User provided reference genes

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