Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014754.1 Olea europaea HOM05D003760 ORTHO05D004672 6.2e-41 170.2 80 100.0
PSO339G5967 Papaver somniferum HOM05D003760 ORTHO05D004672 3.2e-29 131.3 76 77.6
Lj9A655T38 Lonicera japonica HOM05D003760 ORTHO05D004672 5.5e-29 130.6 76 75.0
PSO384G0478 Papaver somniferum HOM05D003760 ORTHO05D004672 7.2e-29 130.2 76 77.6
ECA233G5140 Erigeron canadensis HOM05D003760 ORTHO05D004672 9.4e-29 129.8 80 72.5
Cpa.g.sc223.12 Carica papaya HOM05D003760 ORTHO05D004672 1.2e-28 129.4 76 75.0
DCAR_022349 Daucus carota HOM05D003760 ORTHO05D004672 1.6e-28 129.0 80 72.5
Actinidia19460 Actinidia chinensis HOM05D003760 ORTHO05D004672 2.1e-28 128.6 76 73.7
HanXRQChr12g0382881 Helianthus annuus HOM05D003760 ORTHO05D004672 2.1e-28 128.6 80 72.5
TAR636G0376 Trochodendron aralioides HOM05D003760 ORTHO05D004672 2.7e-28 128.3 76 75.0
Atru.chr12.1379 Acer truncatum HOM05D003760 ORTHO05D004672 3.6e-28 127.9 76 73.7
Gohir.D05G283000 Gossypium hirsutum HOM05D003760 ORTHO05D004672 3.6e-28 127.9 79 70.9
Gorai.009G296500 Gossypium raimondii HOM05D003760 ORTHO05D004672 3.6e-28 127.9 79 70.9
Gohir.A05G281000 Gossypium hirsutum HOM05D003760 ORTHO05D004672 4.6e-28 127.5 76 72.4
Lsat_1_v5_gn_8_34020 Lactuca sativa HOM05D003760 ORTHO05D004672 4.6e-28 127.5 80 73.8
TWI63G0088 Tripterygium wilfordii HOM05D003760 ORTHO05D004672 4.6e-28 127.5 76 75.0
Aqoxy2G00338 Aquilegia oxysepala HOM05D003760 ORTHO05D004672 6.1e-28 127.1 76 73.7
Ciclev10001295m.g Citrus clementina HOM05D003760 ORTHO05D004672 6.1e-28 127.1 76 73.7
Ciclev10005415m.g Citrus clementina HOM05D003760 ORTHO05D004672 6.1e-28 127.1 76 73.7
PGR031G0954 Punica granatum HOM05D003760 ORTHO05D004672 6.1e-28 127.1 76 73.7
Potri.001G026100 Populus trichocarpa HOM05D003760 ORTHO05D004672 7.9e-28 126.7 76 72.4
Thecc.10G166200 Theobroma cacao HOM05D003760 ORTHO05D004672 7.9e-28 126.7 79 72.2
ATR0075G007 Amborella trichopoda HOM05D003760 ORTHO05D004672 1.0e-27 126.3 76 72.4
Duzib114G0596 Durio zibethinus HOM05D003760 ORTHO05D004672 1.0e-27 126.3 79 70.9
TAR633G0271 Trochodendron aralioides HOM05D003760 ORTHO05D004672 1.0e-27 126.3 76 73.7
TAR633G2507 Trochodendron aralioides HOM05D003760 ORTHO05D004672 1.0e-27 126.3 76 73.7
vmacro22865 Vaccinium macrocarpon HOM05D003760 ORTHO05D004672 1.0e-27 126.3 80 71.2
Dinv32036 Davidia involucrata HOM05D003760 ORTHO05D004672 1.4e-27 125.9 76 72.4
FvH4_7g02780 Fragaria vesca HOM05D003760 ORTHO05D004672 1.4e-27 125.9 76 72.4
FAN03G0077 Fragaria x ananassa HOM05D003760 ORTHO05D004672 1.4e-27 125.9 76 72.4
FAN06G0531 Fragaria x ananassa HOM05D003760 ORTHO05D004672 1.4e-27 125.9 76 72.4
FAN10G4281 Fragaria x ananassa HOM05D003760 ORTHO05D004672 1.4e-27 125.9 76 72.4
Nn2g14898 Nelumbo nucifera HOM05D003760 ORTHO05D004672 1.4e-27 125.9 76 73.7
Cc02_g29710 Coffea canephora HOM05D003760 ORTHO05D004672 1.8e-27 125.6 80 71.2
Lsat_1_v5_gn_5_36241 Lactuca sativa HOM05D003760 ORTHO05D004672 1.8e-27 125.6 70 78.6
Sabra03G0148000 Salix brachista HOM05D003760 ORTHO05D004672 1.8e-27 125.6 70 77.1
GSVIVG01000658001 Vitis vinifera HOM05D003760 ORTHO05D004672 1.8e-27 125.6 76 72.4
CiPaw.13G012300 Carya illinoinensis HOM05D003760 ORTHO05D004672 2.3e-27 125.2 76 71.1
AUR62042161 Chenopodium quinoa HOM05D003760 ORTHO05D004672 2.3e-27 125.2 76 71.1
Migut.B01218 Erythranthe guttata HOM05D003760 ORTHO05D004672 2.3e-27 125.2 80 70.0
Potri.003G199301 Populus trichocarpa HOM05D003760 ORTHO05D004672 2.3e-27 125.2 76 71.1
Potri.T126106 Populus trichocarpa HOM05D003760 ORTHO05D004672 2.3e-27 125.2 76 71.1
RcHm_v2.0_Chr4g0394571 Rosa chinensis HOM05D003760 ORTHO05D004672 2.3e-27 125.2 80 71.2
Eucgr.G03244 Eucalyptus grandis HOM05D003760 ORTHO05D004672 3.0e-27 124.8 76 72.4
QL04p014453 Quercus lobata HOM05D003760 ORTHO05D004672 3.0e-27 124.8 76 71.1
QL04p014818 Quercus lobata HOM05D003760 ORTHO05D004672 3.0e-27 124.8 76 71.1
QL06p019987 Quercus lobata HOM05D003760 ORTHO05D004672 3.0e-27 124.8 76 73.7
Hma1.2p1_0121F.1_g057510 Hydrangea macrophylla HOM05D003760 ORTHO05D004672 3.9e-27 124.4 76 71.1
RcHm_v2.0_Chr1g0322021 Rosa chinensis HOM05D003760 ORTHO05D004672 3.9e-27 124.4 76 71.1
Sabra01G0019300 Salix brachista HOM05D003760 ORTHO05D004672 3.9e-27 124.4 70 77.1
MSTRG.20523 Avicennia marina HOM05D003760 ORTHO05D004672 5.1e-27 124.0 80 67.5
EL10Ac1g02286 Beta vulgaris HOM05D003760 ORTHO05D004672 5.1e-27 124.0 76 71.1
MBI13_g01615_MAGBIO Magnolia biondii HOM05D003760 ORTHO05D004672 5.1e-27 124.0 76 71.1
Prupe.2G032300 Prunus persica HOM05D003760 ORTHO05D004672 5.1e-27 124.0 76 71.1
Sopen09g033310 Solanum pennellii HOM05D003760 ORTHO05D004672 5.1e-27 124.0 74 78.4
Aa31LG5G17870 Aethionema arabicum HOM05D003760 ORTHO05D004672 6.7e-27 123.6 73 75.3
Cfa010888 Carpinus fangiana HOM05D003760 ORTHO05D004672 6.7e-27 123.6 76 71.1
FvH4_4g04150 Fragaria vesca HOM05D003760 ORTHO05D004672 6.7e-27 123.6 76 73.7
COL.COLO4_21460 Corchorus olitorius HOM05D003760 ORTHO05D004672 8.8e-27 123.2 79 70.9
FAN01G2043 Fragaria x ananassa HOM05D003760 ORTHO05D004672 8.8e-27 123.2 76 71.1
Actinidia39916 Actinidia chinensis HOM05D003760 ORTHO05D004672 1.1e-26 122.9 70 80.0
CSS0033000 Camellia sinensis var. sinensis HOM05D003760 ORTHO05D004672 1.1e-26 122.9 80 71.2
Nitab4.5_0001681g0070 Nicotiana tabacum HOM05D003760 ORTHO05D004672 1.1e-26 122.9 80 67.5
Sc10g0004370 Simmondsia chinensis HOM05D003760 ORTHO05D004672 1.1e-26 122.9 79 68.4
Haze_03069 Corylus avellana HOM05D003760 ORTHO05D004672 1.5e-26 122.5 76 69.7
PGSC0003DMG400017207 Solanum tuberosum HOM05D003760 ORTHO05D004672 1.5e-26 122.5 74 77.0
THA.LOC104818980 Tarenaya hassleriana HOM05D003760 ORTHO05D004672 1.5e-26 122.5 70 75.7
HPP92_016595 Vanilla planifolia HOM05D003760 ORTHO05D004672 1.5e-26 122.5 80 67.5
Ah.11g039100 Amaranthus hybridus HOM05D003760 ORTHO05D004672 2.5e-26 121.7 76 69.7
MD07G1036800 Malus domestica HOM05D003760 ORTHO05D004672 2.5e-26 121.7 76 69.7
Manes.04G165800 Manihot esculenta HOM05D003760 ORTHO05D004672 2.5e-26 121.7 79 67.1
Sed0017009 Sechium edule HOM05D003760 ORTHO05D004672 2.5e-26 121.7 76 69.7
CSS0016471 Camellia sinensis var. sinensis HOM05D003760 ORTHO05D004672 3.3e-26 121.3 73 72.6
MD02G1290200 Malus domestica HOM05D003760 ORTHO05D004672 3.3e-26 121.3 76 69.7
Nitab4.5_0000320g0110 Nicotiana tabacum HOM05D003760 ORTHO05D004672 3.3e-26 121.3 80 66.2
Hund21541 Selenicereus undatus HOM05D003760 ORTHO05D004672 3.3e-26 121.3 70 75.7
AUR62033839 Chenopodium quinoa HOM05D003760 ORTHO05D004672 4.3e-26 120.9 76 69.7
FAN12G0242 Fragaria x ananassa HOM05D003760 ORTHO05D004672 4.3e-26 120.9 76 71.1
COL.COLO4_15929 Corchorus olitorius HOM05D003760 ORTHO05D004672 5.7e-26 120.6 75 72.0
Nitab4.5_0001425g0120 Nicotiana tabacum HOM05D003760 ORTHO05D004672 5.7e-26 120.6 76 73.7
A05p40900 Brassica napus HOM05D003760 ORTHO05D004672 7.4e-26 120.2 70 75.7
BraA01t04387Z Brassica rapa HOM05D003760 ORTHO05D004672 7.4e-26 120.2 70 75.7
BraA05t22819Z Brassica rapa HOM05D003760 ORTHO05D004672 7.4e-26 120.2 70 75.7
Hma1.2p1_1396F.1_g280580 Hydrangea macrophylla HOM05D003760 ORTHO05D004672 7.4e-26 120.2 76 67.1
Peaxi162Scf00602g00420 Petunia axillaris HOM05D003760 ORTHO05D004672 7.4e-26 120.2 78 74.4
Peaxi162Scf01732g00023 Petunia axillaris HOM05D003760 ORTHO05D004672 7.4e-26 120.2 75 68.0
Cfa006289 Carpinus fangiana HOM05D003760 ORTHO05D004672 9.7e-26 119.8 76 68.4
FAN17G2831 Fragaria x ananassa HOM05D003760 ORTHO05D004672 9.7e-26 119.8 76 71.1
Glyma.07G090900 Glycine max HOM05D003760 ORTHO05D004672 9.7e-26 119.8 76 71.1
Glyma.09G185000 Glycine max HOM05D003760 ORTHO05D004672 9.7e-26 119.8 76 71.1
MSTRG.16994 Avicennia marina HOM05D003760 ORTHO05D004672 1.3e-25 119.4 70 72.9
Oeu015685.1 Olea europaea HOM05D003760 ORTHO05D004672 1.7e-25 119.0 80 66.2
SEGI_24692 Sequoiadendron giganteum HOM05D003760 ORTHO05D004672 1.7e-25 119.0 75 72.0
arahy.Tifrunner.gnm1.ann1.88C8QI Arachis hypogaea HOM05D003760 ORTHO05D004672 2.2e-25 118.6 70 75.7
arahy.Tifrunner.gnm1.ann1.R8F3HD Arachis hypogaea HOM05D003760 ORTHO05D004672 2.2e-25 118.6 70 75.7
BNapus_Darmor_BZH_scaffold_109p00130 Brassica napus HOM05D003760 ORTHO05D004672 2.2e-25 118.6 70 74.3
CiPaw.14G006600 Carya illinoinensis HOM05D003760 ORTHO05D004672 2.2e-25 118.6 76 69.7
AUR62035743 Chenopodium quinoa HOM05D003760 ORTHO05D004672 2.2e-25 118.6 76 67.1
Ca_02468_v3 Cicer arietinum L. HOM05D003760 ORTHO05D004672 2.2e-25 118.6 76 71.1
CsaV3_5G024790 Cucumis sativus L. HOM05D003760 ORTHO05D004672 2.2e-25 118.6 74 71.6
Glyma.11G154300 Glycine max HOM05D003760 ORTHO05D004672 2.2e-25 118.6 76 72.4
Sed0003663 Sechium edule HOM05D003760 ORTHO05D004672 2.2e-25 118.6 76 65.8
SEGI_21043 Sequoiadendron giganteum HOM05D003760 ORTHO05D004672 2.2e-25 118.6 75 72.0
SGA_v2.0_scaffold124G33635 Striga asiatica HOM05D003760 ORTHO05D004672 2.2e-25 118.6 80 66.2
CARHR081950 Cardamine hirsuta HOM05D003760 ORTHO05D004672 2.8e-25 118.2 70 74.3
Sp3g06250 Schrenkiella parvula HOM05D003760 ORTHO05D004672 2.8e-25 118.2 70 74.3
vmacro15463 Vaccinium macrocarpon HOM05D003760 ORTHO05D004672 2.8e-25 118.2 70 75.7
VMungo0464G1704 Vigna mungo HOM05D003760 ORTHO05D004672 2.8e-25 118.2 76 69.7
MELO3C005125.2 Cucumis melo HOM05D003760 ORTHO05D004672 3.7e-25 117.9 74 71.6
FAN22G1391 Fragaria x ananassa HOM05D003760 ORTHO05D004672 3.7e-25 117.9 76 69.7
BolC1t05559H Brassica oleracea HOM05D003760 ORTHO05D004672 4.8e-25 117.5 70 72.9
Phvul.005G029500 Phaseolus vulgaris HOM05D003760 ORTHO05D004672 4.8e-25 117.5 76 71.1
Lalb_Chr08g0234711 Lupinus albus HOM05D003760 ORTHO05D004672 6.3e-25 117.1 76 68.4
Actinidia06253 Actinidia chinensis HOM05D003760 ORTHO05D004672 8.2e-25 116.7 76 67.1
Lj3g0013265 Lotus japonicus HOM05D003760 ORTHO05D004672 8.2e-25 116.7 76 68.4
Nitab4.5_0006936g0020 Nicotiana tabacum HOM05D003760 ORTHO05D004672 8.2e-25 116.7 74 73.0
Phvul.004G157800 Phaseolus vulgaris HOM05D003760 ORTHO05D004672 8.2e-25 116.7 76 68.4
Prupe.1G044800 Prunus persica HOM05D003760 ORTHO05D004672 8.2e-25 116.7 76 68.4
Rhsim02G0042300 Rhododendron simsii HOM05D003760 ORTHO05D004672 8.2e-25 116.7 76 69.7
Zm00001eb048720 Zea mays HOM05D003760 ORTHO05D004672 8.2e-25 116.7 80 66.2
Medtr5g031790 Medicago truncatula HOM05D003760 ORTHO05D004672 1.1e-24 116.3 76 69.7
Potri.010G068600 Populus trichocarpa HOM05D003760 ORTHO05D004672 1.1e-24 116.3 80 68.8
C05p60000 Brassica napus HOM05D003760 ORTHO05D004672 1.8e-24 115.5 70 72.9
BolC5t34655H Brassica oleracea HOM05D003760 ORTHO05D004672 1.8e-24 115.5 70 72.9
CAN.G476.4 Capsicum annuum HOM05D003760 ORTHO05D004672 1.8e-24 115.5 76 64.5
AT3G07300 Arabidopsis thaliana HOM05D003760 ORTHO05D004672 2.4e-24 115.2 70 74.3
MD13G1218200 Malus domestica HOM05D003760 ORTHO05D004672 2.4e-24 115.2 80 66.2
Zm00001eb223560 Zea mays HOM05D003760 ORTHO05D004672 2.4e-24 115.2 80 65.0
AL3G18600 Arabidopsis lyrata HOM05D003760 ORTHO05D004672 4.1e-24 114.4 70 72.9
Carub.0003s0684 Capsella rubella HOM05D003760 ORTHO05D004672 4.1e-24 114.4 70 74.3
Solyc11g005600.2 Solanum lycopersicum HOM05D003760 ORTHO05D004672 6.9e-24 113.6 80 63.8
Sopen11g001570 Solanum pennellii HOM05D003760 ORTHO05D004672 6.9e-24 113.6 80 63.8
CDE07G1968 Ceratophyllum demersum HOM05D003760 ORTHO05D004672 1.5e-23 112.5 70 71.4
Ciclev10006759m.g Citrus clementina HOM05D003760 ORTHO05D004672 2.0e-23 112.1 80 63.8
Atru.chr4.1982 Acer truncatum HOM05D003760 ORTHO05D004672 2.6e-23 111.7 68 72.1
AagrBONN_evm.TU.Sc2ySwM_344.807 Anthoceros agrestis HOM05D003760 ORTHO05D004672 1.0e-22 109.8 74 64.9
unitig_578.g16298 Utricularia gibba HOM05D003760 ORTHO05D004672 1.0e-22 109.8 80 62.5
Pp3c21_14090 Physcomitrium patens HOM05D003760 ORTHO05D004672 1.4e-21 105.9 74 60.8
CAN.G220.44 Capsicum annuum HOM05D003760 ORTHO05D004672 2.5e-21 105.1 76 68.4
Mapoly0105s0017 Marchantia polymorpha HOM05D003760 ORTHO05D004672 3.2e-21 104.8 74 62.2
Rhsim07G0066200 Rhododendron simsii HOM05D003760 ORTHO05D004672 1.6e-20 102.4 118 45.8
SMO340G0195 Selaginella moellendorffii HOM05D003760 ORTHO05D004672 2.1e-20 102.1 71 60.6
Pp3c10_19890 Physcomitrium patens HOM05D003760 ORTHO05D004672 3.6e-20 101.3 74 59.5
BcaB04g21296 Brassica carinata HOM05D003760 ORTHO05D004672 6.1e-20 100.5 70 65.7
Sabra10G0038400 Salix brachista HOM05D003760 ORTHO05D004672 3.9e-19 97.8 105 51.4
QL04p014432 Quercus lobata HOM05D003760 ORTHO05D004672 5.1e-19 97.4 63 66.7
Actinidia06251 Actinidia chinensis HOM05D003760 ORTHO05D004672 2.8e-17 91.7 67 68.7
TAR701G0001 Trochodendron aralioides HOM05D003760 ORTHO05D004672 2.2e-14 82.0 49 73.5
Duzib128G1330 Durio zibethinus HOM05D003760 ORTHO05D004672 1.1e-13 79.7 50 66.0
ClCG01G007720 Citrullus lanatus HOM05D003760 ORTHO05D004672 1.5e-13 79.3 63 61.9
AUR62043363 Chenopodium quinoa HOM05D003760 ORTHO05D004672 4.2e-13 77.8 52 61.5
TPR.G36778 Trifolium pratense HOM05D003760 ORTHO05D004672 1.2e-12 76.3 51 68.6
Cre16.g662902 Chlamydomonas reinhardtii HOM05D003760 ORTHO05D004672 2.7e-12 75.1 49 63.3
Solyc09g090400.4 Solanum lycopersicum HOM05D003760 ORTHO05D004672 4.7e-12 74.3 50 72.0
Actinidia06249 Actinidia chinensis HOM05D003760 ORTHO05D004672 1.8e-11 72.4 49 61.2
Cfa022448 Carpinus fangiana HOM05D003760 ORTHO05D004672 3.0e-11 71.6 68 42.6
PRCOL_00001306 Prasinoderma coloniale HOM05D003760 ORTHO05D004672 3.0e-11 71.6 70 42.9
Psat6g019840 Pisum sativum HOM05D003760 ORTHO05D004672 2.6e-10 68.6 76 52.6
MCO16G454 Micromonas commoda HOM05D003760 ORTHO05D004672 1.1e-08 63.2 82 37.8
Thhalv10007798m.g Eutrema salsugineum HOM05D003760 ORTHO05D004672 2.4e-08 62.0 40 62.5
CBR_g42076 Chara braunii HOM05D003760 ORTHO05D004672 1.6e-07 59.3 48 58.3
Cc03_g05890 Coffea canephora HOM05D003760 ORTHO05D004672 3.8e-06 54.7 31 74.2


User provided reference genes

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