Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014739.1 Olea europaea HOM05D000179 ORTHO05D000107 5.6e-107 391.0 199 100.0
Dinv22503 Davidia involucrata HOM05D000179 ORTHO05D000107 1.8e-44 183.3 259 48.3
Dinv32885 Davidia involucrata HOM05D000179 ORTHO05D000107 1.2e-37 160.6 240 47.1
GSVIVG01003119001 Vitis vinifera HOM05D000179 ORTHO05D000107 1.8e-36 156.8 199 51.3
Oeu025765.1 Olea europaea HOM05D000179 ORTHO05D000107 1.7e-31 140.2 253 41.1
Nn1g02458 Nelumbo nucifera HOM05D000179 ORTHO05D000107 2.9e-31 139.4 269 39.8
Actinidia24923 Actinidia chinensis HOM05D000179 ORTHO05D000107 1.9e-30 136.7 257 41.6
Cc01_g19010 Coffea canephora HOM05D000179 ORTHO05D000107 3.2e-30 136.0 292 39.4
CSS0000745 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 9.5e-30 134.4 282 40.4
TAR636G0240 Trochodendron aralioides HOM05D000179 ORTHO05D000107 9.5e-30 134.4 242 41.7
Duzib211G0150 Durio zibethinus HOM05D000179 ORTHO05D000107 3.6e-29 132.5 252 38.9
Gohir.D12G002500 Gossypium hirsutum HOM05D000179 ORTHO05D000107 6.8e-28 128.3 256 38.7
Gorai.008G002200 Gossypium raimondii HOM05D000179 ORTHO05D000107 6.8e-28 128.3 256 38.3
Duzib138G1256 Durio zibethinus HOM05D000179 ORTHO05D000107 8.8e-28 127.9 248 38.3
RcHm_v2.0_Chr6g0289921 Rosa chinensis HOM05D000179 ORTHO05D000107 1.2e-27 127.5 244 41.4
FvH4_2g22950 Fragaria vesca HOM05D000179 ORTHO05D000107 3.4e-27 125.9 257 39.7
Thecc.01G271700 Theobroma cacao HOM05D000179 ORTHO05D000107 3.4e-27 125.9 253 36.8
FAN15G1122 Fragaria x ananassa HOM05D000179 ORTHO05D000107 4.4e-27 125.6 257 39.7
Hma1.2p1_0172F.1_g076010 Hydrangea macrophylla HOM05D000179 ORTHO05D000107 5.7e-27 125.2 240 40.4
FAN24G3243 Fragaria x ananassa HOM05D000179 ORTHO05D000107 7.5e-27 124.8 257 39.3
Gorai.007G139800 Gossypium raimondii HOM05D000179 ORTHO05D000107 7.5e-27 124.8 231 40.3
Gohir.D11G130800 Gossypium hirsutum HOM05D000179 ORTHO05D000107 9.8e-27 124.4 231 40.3
TAR365G0388 Trochodendron aralioides HOM05D000179 ORTHO05D000107 9.8e-27 124.4 256 37.5
Ciclev10019959m.g Citrus clementina HOM05D000179 ORTHO05D000107 1.7e-26 123.6 274 35.4
Gohir.A11G125500 Gossypium hirsutum HOM05D000179 ORTHO05D000107 3.7e-26 122.5 233 41.2
CSS0028952 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 4.9e-26 122.1 171 48.0
CiPaw.08G109700 Carya illinoinensis HOM05D000179 ORTHO05D000107 8.3e-26 121.3 279 38.0
Actinidia21142 Actinidia chinensis HOM05D000179 ORTHO05D000107 2.4e-25 119.8 199 43.2
Duzib133G0638 Durio zibethinus HOM05D000179 ORTHO05D000107 2.4e-25 119.8 251 36.7
Gohir.A12G002800 Gossypium hirsutum HOM05D000179 ORTHO05D000107 2.4e-25 119.8 256 36.3
MSTRG.17462 Avicennia marina HOM05D000179 ORTHO05D000107 4.1e-25 119.0 252 37.3
FAN20G1262 Fragaria x ananassa HOM05D000179 ORTHO05D000107 4.1e-25 119.0 257 38.5
Oeu028463.1 Olea europaea HOM05D000179 ORTHO05D000107 5.4e-25 118.6 158 51.3
Lj1A55G20 Lonicera japonica HOM05D000179 ORTHO05D000107 7.0e-25 118.2 209 42.6
MD03G1258200 Malus domestica HOM05D000179 ORTHO05D000107 3.5e-24 115.9 266 36.1
FAN27G2274 Fragaria x ananassa HOM05D000179 ORTHO05D000107 5.9e-24 115.2 255 37.6
Prupe.8G234800 Prunus persica HOM05D000179 ORTHO05D000107 5.9e-24 115.2 250 38.0
vmacro14888 Vaccinium macrocarpon HOM05D000179 ORTHO05D000107 5.9e-24 115.2 261 38.7
TAR633G1320 Trochodendron aralioides HOM05D000179 ORTHO05D000107 8.6e-23 111.3 237 36.3
Manes.05G081800 Manihot esculenta HOM05D000179 ORTHO05D000107 4.3e-22 109.0 255 36.5
Actinidia19961 Actinidia chinensis HOM05D000179 ORTHO05D000107 5.6e-22 108.6 242 38.4
Cfa006201 Carpinus fangiana HOM05D000179 ORTHO05D000107 5.6e-22 108.6 233 40.8
Rhsim01G0272100 Rhododendron simsii HOM05D000179 ORTHO05D000064 7.3e-22 108.2 263 38.0
MD11G1278800 Malus domestica HOM05D000179 ORTHO05D000107 1.2e-21 107.5 244 37.3
Potri.005G215100 Populus trichocarpa HOM05D000179 ORTHO05D000107 1.6e-21 107.1 278 34.2
AT4G02670 Arabidopsis thaliana HOM05D000179 ORTHO05D000107 2.8e-21 106.3 200 41.0
Nn6g34168 Nelumbo nucifera HOM05D000179 ORTHO05D000107 3.6e-21 105.9 235 37.0
COL.COLO4_09188 Corchorus olitorius HOM05D000179 ORTHO05D000107 3.0e-20 102.8 251 33.1
Potri.002G048000 Populus trichocarpa HOM05D000179 ORTHO05D000107 3.0e-20 102.8 275 33.1
Gohir.A08G064000 Gossypium hirsutum HOM05D000179 ORTHO05D000107 4.0e-20 102.4 258 35.7
Manes.01G204100 Manihot esculenta HOM05D000179 ORTHO05D000107 4.0e-20 102.4 262 36.3
Lsat_1_v5_gn_5_185501 Lactuca sativa HOM05D000179 ORTHO05D000107 8.9e-20 101.3 267 36.0
Phvul.001G154800 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 2.6e-19 99.8 260 35.8
DCAR_002702 Daucus carota HOM05D000179 ORTHO05D000107 3.4e-19 99.4 243 36.6
Eucgr.B01471 Eucalyptus grandis HOM05D000179 ORTHO05D000107 3.4e-19 99.4 257 33.9
Sabra05G0164400 Salix brachista HOM05D000179 ORTHO05D000107 5.7e-19 98.6 278 33.1
Gohir.D08G072500 Gossypium hirsutum HOM05D000179 ORTHO05D000107 7.5e-19 98.2 258 33.7
Gorai.004G076800 Gossypium raimondii HOM05D000179 ORTHO05D000107 7.5e-19 98.2 258 34.9
Sabra02G0039200 Salix brachista HOM05D000179 ORTHO05D000107 7.5e-19 98.2 271 34.7
BcaB05g23653 Brassica carinata HOM05D000179 ORTHO05D000107 1.7e-18 97.1 207 39.6
Psat6g058520 Pisum sativum HOM05D000179 ORTHO05D000107 2.9e-18 96.3 208 38.9
TWI12G1078 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 2.9e-18 96.3 241 35.3
Peaxi162Scf00259g00513 Petunia axillaris HOM05D000179 ORTHO05D000107 3.7e-18 95.9 263 33.8
HanXRQChr01g0005621 Helianthus annuus HOM05D000179 ORTHO05D000107 4.9e-18 95.5 244 34.8
Cpa.g.sc52.117 Carica papaya HOM05D000179 ORTHO05D000107 1.1e-17 94.4 246 37.4
Aqoxy2G03463 Aquilegia oxysepala HOM05D000179 ORTHO05D000107 1.4e-17 94.0 287 34.1
Lj2A1165G50 Lonicera japonica HOM05D000179 ORTHO05D000107 4.1e-17 92.4 186 41.4
MSTRG.12550 Avicennia marina HOM05D000179 ORTHO05D000107 5.4e-17 92.0 254 33.5
ClCG09G007400 Citrullus lanatus HOM05D000179 ORTHO05D000107 7.0e-17 91.7 303 32.3
TWI18G1044 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 7.0e-17 91.7 209 36.4
arahy.Tifrunner.gnm1.ann1.9KUV83 Arachis hypogaea HOM05D000179 ORTHO05D000107 9.2e-17 91.3 274 32.5
Sed0017240 Sechium edule HOM05D000179 ORTHO05D000107 9.2e-17 91.3 278 33.8
arahy.Tifrunner.gnm1.ann1.KA762Q Arachis hypogaea HOM05D000179 ORTHO05D000107 1.2e-16 90.9 272 32.7
A02p24910 Brassica napus HOM05D000179 ORTHO05D000107 2.7e-16 89.7 198 40.9
BraA02t07481Z Brassica rapa HOM05D000179 ORTHO05D000107 2.7e-16 89.7 198 40.9
CAN.G433.5 Capsicum annuum HOM05D000179 ORTHO05D000107 2.7e-16 89.7 287 33.4
Atru.chr5.1520 Acer truncatum HOM05D000179 ORTHO05D000107 4.6e-16 89.0 152 40.1
CiPaw.07G086900 Carya illinoinensis HOM05D000179 ORTHO05D000107 5.9e-16 88.6 265 35.5
Nitab4.5_0000459g0080 Nicotiana tabacum HOM05D000179 ORTHO05D000107 5.9e-16 88.6 281 33.5
Glyma.19G159600 Glycine max HOM05D000179 ORTHO05D000107 7.8e-16 88.2 255 34.5
BcaC03g16159 Brassica carinata HOM05D000179 ORTHO05D000107 1.3e-15 87.4 198 39.9
CANSAT25G0389 Cannabis sativa HOM05D000179 ORTHO05D000107 1.3e-15 87.4 291 33.0
C02p39200 Brassica napus HOM05D000179 ORTHO05D000107 1.7e-15 87.0 197 40.1
BolC2t09932H Brassica oleracea HOM05D000179 ORTHO05D000107 1.7e-15 87.0 197 40.1
Phvul.007G174900 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 1.7e-15 87.0 243 32.9
CsaV3_7G027880 Cucumis sativus L. HOM05D000179 ORTHO05D000107 2.3e-15 86.7 305 30.8
Lj1g0012149 Lotus japonicus HOM05D000179 ORTHO05D000107 2.3e-15 86.7 216 34.7
MBI04_g27914_MAGBIO Magnolia biondii HOM05D000179 ORTHO05D000107 3.0e-15 86.3 216 34.3
VMungo1383G2029 Vigna mungo HOM05D000179 ORTHO05D000107 3.9e-15 85.9 260 34.6
AL6G50370 Arabidopsis lyrata HOM05D000179 ORTHO05D000107 5.0e-15 85.5 202 35.6
Migut.D00357 Erythranthe guttata HOM05D000179 ORTHO05D000107 8.6e-15 84.7 266 35.0
TPR.G34885 Trifolium pratense HOM05D000179 ORTHO05D000107 8.6e-15 84.7 232 36.2
Glyma.10G029700 Glycine max HOM05D000179 ORTHO05D000107 3.3e-14 82.8 246 34.1
Sp6g02590 Schrenkiella parvula HOM05D000179 ORTHO05D000107 4.3e-14 82.4 199 37.2
Nitab4.5_0004115g0010 Nicotiana tabacum HOM05D000179 ORTHO05D000107 5.6e-14 82.0 277 33.6
CDE06G1608 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 7.3e-14 81.6 180 40.0
PGSC0003DMG400019342 Solanum tuberosum HOM05D000179 ORTHO05D000107 7.3e-14 81.6 294 30.6
CDE07G0798 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 1.2e-13 80.9 184 39.7
Solyc09g065670.3 Solanum lycopersicum HOM05D000179 ORTHO05D000107 4.7e-13 79.0 291 30.2
Sed0000186 Sechium edule HOM05D000179 ORTHO05D000107 6.2e-13 78.6 305 29.2
Carub.0006s3445 Capsella rubella HOM05D000179 ORTHO05D000107 1.1e-12 77.8 204 37.7
Lj5g0021439 Lotus japonicus HOM05D000179 ORTHO05D000107 1.4e-12 77.4 232 38.4
VMungo0720G1299 Vigna mungo HOM05D000179 ORTHO05D000107 1.4e-12 77.4 247 33.2
AUR62011972 Chenopodium quinoa HOM05D000179 ORTHO05D000107 2.3e-12 76.6 247 32.8
Glyma.02G144400 Glycine max HOM05D000179 ORTHO05D000107 4.0e-12 75.9 240 31.2
Lalb_Chr06g0162791 Lupinus albus HOM05D000179 ORTHO05D000107 4.0e-12 75.9 260 33.8
Sopen09g027420 Solanum pennellii HOM05D000179 ORTHO05D000107 5.2e-12 75.5 291 29.6
Lalb_Chr21g0306341 Lupinus albus HOM05D000179 ORTHO05D000107 6.8e-12 75.1 260 30.8
MELO3C015806.2 Cucumis melo HOM05D000179 ORTHO05D000107 8.9e-12 74.7 143 39.9
Glyma.03G157432 Glycine max HOM05D000179 ORTHO05D000107 2.6e-11 73.2 253 29.6
CARHR250970 Cardamine hirsuta HOM05D000179 ORTHO05D000107 5.8e-11 72.0 210 33.3
Sc05g0001290 Simmondsia chinensis HOM05D000179 ORTHO05D000107 5.8e-11 72.0 232 35.3
ECA248G0822 Erigeron canadensis HOM05D000179 ORTHO05D000107 1.7e-10 70.5 236 30.1
DCAR_012507 Daucus carota HOM05D000179 ORTHO05D000107 6.4e-10 68.6 288 29.9
QL12p042256 Quercus lobata HOM05D000179 ORTHO05D000107 1.4e-09 67.4 257 31.1
Ah.02g111300 Amaranthus hybridus HOM05D000179 ORTHO05D000064 2.4e-09 66.6 259 29.7
Ca_09728_v3 Cicer arietinum L. HOM05D000179 ORTHO05D000107 7.0e-09 65.1 197 34.0
PSO384G3854 Papaver somniferum HOM05D000179 ORTHO05D000107 1.2e-08 64.3 174 35.1
PSO339G5190 Papaver somniferum HOM05D000179 ORTHO05D000107 1.0e-07 61.2 176 36.9
unitig_699.g19311 Utricularia gibba HOM05D000179 ORTHO05D000107 1.3e-07 60.8 183 35.0
EL10Ac5g10493 Beta vulgaris HOM05D000179 ORTHO05D000107 3.9e-07 59.3 274 28.5
Thhalv10028701m.g Eutrema salsugineum HOM05D000179 ORTHO05D000107 3.9e-07 59.3 211 32.2
Ah.11g050230 Amaranthus hybridus HOM05D000179 ORTHO05D000107 5.0e-07 58.9 284 28.9
Aqoxy5G00399 Aquilegia oxysepala HOM05D000179 ORTHO05D000107 5.0e-07 58.9 238 28.6
PGR044G2027 Punica granatum HOM05D000179 ORTHO05D000107 8.6e-07 58.2 187 36.4
Sabra02G0039100 Salix brachista HOM05D000179 ORTHO05D000107 8.6e-07 58.2 83 44.6
CSS0046960 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 3.3e-06 56.2 119 42.0
Aa31LG4G14570 Aethionema arabicum HOM05D000179 ORTHO05D000107 7.3e-06 55.1 177 35.0
MBI04_g08702_MAGBIO Magnolia biondii HOM05D000179 ORTHO05D000107 7.3e-06 55.1 62 50.0


User provided reference genes

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