Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014736.1 Olea europaea HOM05D004978 ORTHO05D005621 0.0e+00 1183.3 618 100.0
Dinv32884 Davidia involucrata HOM05D004978 ORTHO05D005621 1.7e-138 497.3 644 46.4
Migut.D00356 Erythranthe guttata HOM05D004978 ORTHO05D005621 1.6e-136 490.7 636 45.6
SGA_v2.0_scaffold1G00534 Striga asiatica HOM05D004978 ORTHO05D005621 1.7e-133 480.7 677 45.2
CAN.G433.6 Capsicum annuum HOM05D004978 ORTHO05D005621 1.4e-119 434.5 638 44.2
Solyc09g065690.4 Solanum lycopersicum HOM05D004978 ORTHO05D005621 1.8e-119 434.1 646 44.0
Sopen09g027430 Solanum pennellii HOM05D004978 ORTHO05D005621 1.8e-119 434.1 646 44.0
Gohir.D08G072400 Gossypium hirsutum HOM05D004978 ORTHO05D005621 2.0e-118 430.6 650 41.5
QL12p042266 Quercus lobata HOM05D004978 ORTHO05D005621 3.4e-118 429.9 637 44.4
Gorai.004G076600 Gossypium raimondii HOM05D004978 ORTHO05D005621 5.8e-118 429.1 649 41.6
Potri.005G215200 Populus trichocarpa HOM05D004978 ORTHO05D005621 7.5e-118 428.7 645 42.0
vmacro14887 Vaccinium macrocarpon HOM05D004978 ORTHO05D005621 9.8e-118 428.3 634 42.9
Cc01_g19000 Coffea canephora HOM05D004978 ORTHO05D005621 1.7e-117 427.6 635 41.9
Thecc.01G271500 Theobroma cacao HOM05D004978 ORTHO05D005621 1.7e-117 427.6 645 41.1
COL.COLO4_09187 Corchorus olitorius HOM05D004978 ORTHO05D005621 4.9e-117 426.0 636 42.8
Gohir.A08G063900 Gossypium hirsutum HOM05D004978 ORTHO05D005621 8.3e-117 425.2 650 41.2
TWI75G1276 Tripterygium wilfordii HOM05D004978 ORTHO05D005621 8.3e-117 425.2 643 42.1
Ciclev10019332m.g Citrus clementina HOM05D004978 ORTHO05D005621 1.1e-116 424.9 646 41.0
Nn1g02459 Nelumbo nucifera HOM05D004978 ORTHO05D005621 1.9e-116 424.1 643 42.6
Nitab4.5_0004115g0020 Nicotiana tabacum HOM05D004978 ORTHO05D005621 5.4e-116 422.5 644 42.1
Cfa006202 Carpinus fangiana HOM05D004978 ORTHO05D005621 2.7e-115 420.2 642 43.5
HanXRQChr04g0113941 Helianthus annuus HOM05D004978 ORTHO05D005621 2.7e-115 420.2 637 41.8
MD11G1278700 Malus domestica HOM05D004978 ORTHO05D005621 6.0e-115 419.1 642 42.1
Haze_04642 Corylus avellana HOM05D004978 ORTHO05D005621 1.0e-114 418.3 648 42.4
CiPaw.07G086800 Carya illinoinensis HOM05D004978 ORTHO05D005621 7.3e-113 412.1 630 42.2
CANSAT25G0263 Cannabis sativa HOM05D004978 ORTHO05D005621 8.1e-112 408.7 642 41.7
PGR044G1133 Punica granatum HOM05D004978 ORTHO05D005621 1.4e-111 407.9 645 42.3
Atru.chr5.1521 Acer truncatum HOM05D004978 ORTHO05D005621 3.7e-109 399.8 684 38.9
FAN24G2655 Fragaria x ananassa HOM05D004978 ORTHO05D005621 6.4e-109 399.1 648 40.1
Rhsim01G0272000 Rhododendron simsii HOM05D004978 ORTHO05D005621 9.2e-108 395.2 527 45.9
FAN27G2645 Fragaria x ananassa HOM05D004978 ORTHO05D005621 1.2e-107 394.8 651 40.4
Peaxi162Scf00259g00051 Petunia axillaris HOM05D004978 ORTHO05D005621 1.1e-105 388.3 638 41.1
ECA236G1829 Erigeron canadensis HOM05D004978 ORTHO05D005621 1.9e-105 387.5 652 38.5
Glyma.10G029800 Glycine max HOM05D004978 ORTHO05D005621 2.5e-105 387.1 638 39.3
Phvul.007G175000 Phaseolus vulgaris HOM05D004978 ORTHO05D005621 7.3e-105 385.6 642 39.6
FAN20G1006 Fragaria x ananassa HOM05D004978 ORTHO05D005621 9.5e-105 385.2 676 39.3
Lj5g0010127 Lotus japonicus HOM05D004978 ORTHO05D005621 9.5e-105 385.2 647 39.9
Psat6g058480 Pisum sativum HOM05D004978 ORTHO05D005621 9.5e-105 385.2 639 39.3
DCAR_002701 Daucus carota HOM05D004978 ORTHO05D005621 1.6e-104 384.4 671 40.7
arahy.Tifrunner.gnm1.ann1.54WUVN Arachis hypogaea HOM05D004978 ORTHO05D005621 1.8e-103 380.9 655 38.9
Lalb_Chr02g0142521 Lupinus albus HOM05D004978 ORTHO05D005621 1.8e-103 380.9 648 38.3
FAN15G0608 Fragaria x ananassa HOM05D004978 ORTHO05D005621 2.9e-101 373.6 703 38.3
AUR62032283 Chenopodium quinoa HOM05D004978 ORTHO05D005621 4.2e-100 369.8 696 38.4
Medtr1g071300 Medicago truncatula HOM05D004978 ORTHO05D005621 4.2e-100 369.8 637 37.5
Lsat_1_v5_gn_8_93980 Lactuca sativa HOM05D004978 ORTHO05D005621 1.2e-99 368.2 630 40.6
arahy.Tifrunner.gnm1.ann1.ZM38TH Arachis hypogaea HOM05D004978 ORTHO05D005621 4.6e-99 366.3 630 38.6
Sed0003895 Sechium edule HOM05D004978 ORTHO05D005621 5.6e-97 359.4 649 38.7
QL01p000805 Quercus lobata HOM05D004978 ORTHO05D005621 9.6e-97 358.6 531 43.5
Aqoxy5G00398 Aquilegia oxysepala HOM05D004978 ORTHO05D005621 1.6e-96 357.8 621 38.0
Ca_09727_v3 Cicer arietinum L. HOM05D004978 ORTHO05D005621 2.1e-96 357.5 627 37.6
PSO210G1189 Papaver somniferum HOM05D004978 ORTHO05D005621 4.7e-96 356.3 638 37.0
PSO832G2480 Papaver somniferum HOM05D004978 ORTHO05D005621 8.1e-96 355.5 636 36.8
CsaV3_7G027890 Cucumis sativus L. HOM05D004978 ORTHO05D005621 5.3e-95 352.8 641 37.1
Hund09547 Selenicereus undatus HOM05D004978 ORTHO05D005621 7.6e-94 349.0 687 37.0
ClCG09G007410 Citrullus lanatus HOM05D004978 ORTHO05D005621 6.4e-93 345.9 644 38.4
Duzib133G0140 Durio zibethinus HOM05D004978 ORTHO05D005621 1.0e-90 338.6 638 36.8
Nitab4.5_0000459g0120 Nicotiana tabacum HOM05D004978 ORTHO05D005621 1.0e-90 338.6 650 37.5
CSS0039116 Camellia sinensis var. sinensis HOM05D004978 ORTHO05D005621 6.6e-90 335.9 560 40.0
FvH4_2g22940 Fragaria vesca HOM05D004978 ORTHO05D005621 8.7e-90 335.5 522 42.7
AL6G31360 Arabidopsis lyrata HOM05D004978 ORTHO05D005621 1.5e-89 334.7 636 36.2
Aa31LG9G14570 Aethionema arabicum HOM05D004978 ORTHO05D005621 1.9e-89 334.3 648 36.7
CARHR193040 Cardamine hirsuta HOM05D004978 ORTHO05D005621 3.3e-89 333.6 644 37.0
BcaB01g04828 Brassica carinata HOM05D004978 ORTHO05D005621 7.3e-89 332.4 638 37.1
AT5G19840 Arabidopsis thaliana HOM05D004978 ORTHO05D005621 1.6e-88 331.3 636 36.2
Ah.11g050220 Amaranthus hybridus HOM05D004978 ORTHO05D005621 4.8e-88 329.7 630 37.1
C03p11220 Brassica napus HOM05D004978 ORTHO05D005621 4.8e-88 329.7 638 37.0
BolC3t13593H Brassica oleracea HOM05D004978 ORTHO05D005621 1.4e-87 328.2 638 37.0
MELO3C015807.2 Cucumis melo HOM05D004978 ORTHO05D005621 1.4e-87 328.2 630 36.2
Sed0016751 Sechium edule HOM05D004978 ORTHO05D005621 7.6e-86 322.4 642 36.8
Actinidia24924 Actinidia chinensis HOM05D004978 ORTHO05D005621 2.2e-85 320.9 399 47.1
Eucgr.K03324 Eucalyptus grandis HOM05D004978 ORTHO05D005621 6.4e-85 319.3 518 41.1
Manes.05G081900 Manihot esculenta HOM05D004978 ORTHO05D005621 9.3e-84 315.5 407 47.7
A03p09660 Brassica napus HOM05D004978 ORTHO05D005621 1.6e-83 314.7 641 36.3
Thhalv10013262m.g Eutrema salsugineum HOM05D004978 ORTHO05D005621 2.7e-83 313.9 627 35.7
BraA03t10282Z Brassica rapa HOM05D004978 ORTHO05D005621 1.0e-82 312.0 651 35.9
BcaB01g04842 Brassica carinata HOM05D004978 ORTHO05D005621 2.3e-82 310.8 640 35.8
Sp6g24570 Schrenkiella parvula HOM05D004978 ORTHO05D005621 1.8e-79 301.2 633 34.9
AUR62011971 Chenopodium quinoa HOM05D004978 ORTHO05D005621 5.8e-78 296.2 672 34.2
PGSC0003DMG400019309 Solanum tuberosum HOM05D004978 ORTHO05D005621 2.3e-74 284.3 375 45.9
RcHm_v2.0_Chr6g0289911 Rosa chinensis HOM05D004978 ORTHO05D005621 5.1e-74 283.1 358 46.6
GSVIVG01003121001 Vitis vinifera HOM05D004978 ORTHO05D005621 8.7e-74 282.3 373 45.3
ATR0665G047 Amborella trichopoda HOM05D004978 ORTHO05D005621 2.8e-72 277.3 611 33.2
TAR636G0163 Trochodendron aralioides HOM05D004978 ORTHO05D005621 5.1e-66 256.5 369 42.5
Prupe.8G234700 Prunus persica HOM05D004978 ORTHO05D005621 9.7e-65 252.3 638 31.0
Sc05g0001310 Simmondsia chinensis HOM05D004978 ORTHO05D005621 1.6e-64 251.5 372 42.2
EL10Ac5g10492 Beta vulgaris HOM05D004978 ORTHO05D005621 3.1e-63 247.3 371 41.2
MD03G1258000 Malus domestica HOM05D004978 ORTHO05D005621 2.6e-62 244.2 371 42.0
Zm00001eb370120 Zea mays HOM05D004978 ORTHO05D005621 5.5e-60 236.5 399 38.8
HPP92_027617 Vanilla planifolia HOM05D004978 ORTHO05D005621 1.0e-53 215.7 378 38.1
CDE02G4319 Ceratophyllum demersum HOM05D004978 ORTHO05D005621 6.5e-53 213.0 621 31.2
Carub.0006s1818 Capsella rubella HOM05D004978 ORTHO05D005621 4.2e-52 210.3 368 37.5
SMO367G0146 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 6.1e-51 206.5 599 29.4
Pp3c26_13750 Physcomitrium patens HOM05D004978 ORTHO05D005621 6.7e-50 203.0 697 26.8
TWI12G0244 Tripterygium wilfordii HOM05D004978 ORTHO05D005621 1.1e-49 202.2 310 41.0
GSVIVG01003120001 Vitis vinifera HOM05D004978 ORTHO05D005621 2.0e-49 201.4 190 58.9
Sabra05G0164500 Salix brachista HOM05D004978 ORTHO05D005621 1.7e-48 198.4 331 39.3
AagrBONN_evm.TU.Sc2ySwM_117.2029 Anthoceros agrestis HOM05D004978 ORTHO05D005621 2.6e-46 191.0 645 26.5
Cpa.g.sc52.119 Carica papaya HOM05D004978 ORTHO05D005621 6.5e-45 186.4 328 37.2
unitig_0.g1132 Utricularia gibba HOM05D004978 ORTHO05D005621 9.4e-44 182.6 645 28.5
Lj2A1164T58 Lonicera japonica HOM05D004978 ORTHO05D005621 1.6e-43 181.8 170 59.4
Sc05g0001300 Simmondsia chinensis HOM05D004978 ORTHO05D005621 1.6e-43 181.8 170 58.2
Mapoly0003s0071 Marchantia polymorpha HOM05D004978 ORTHO05D005621 2.1e-43 181.4 649 26.3
MD03G1258100 Malus domestica HOM05D004978 ORTHO05D005621 2.7e-43 181.0 162 57.4
PGSC0003DMG400019310 Solanum tuberosum HOM05D004978 ORTHO05D005621 1.0e-42 179.1 184 56.0
VMungo0720G1640 Vigna mungo HOM05D004978 ORTHO05D005621 8.8e-42 176.0 174 54.0
VMungo0720G1803 Vigna mungo HOM05D004978 ORTHO05D005621 2.6e-41 174.5 334 35.3
Cpa.g.sc52.118 Carica papaya HOM05D004978 ORTHO05D005621 3.1e-39 167.5 187 51.9
SMO343G0029 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 2.9e-37 161.0 483 30.6
Carub.0006s1819 Capsella rubella HOM05D004978 ORTHO05D005621 5.2e-34 150.2 187 46.5
SMO367G0062 Selaginella moellendorffii HOM05D006097 ORTHO05D005621 6.8e-34 149.8 346 34.1
HPP92_022057 Vanilla planifolia HOM05D004978 ORTHO05D005621 8.3e-32 142.9 181 47.5
Glyma.02G144267 Glycine max HOM05D004978 ORTHO05D005621 3.2e-28 131.0 147 47.6
RcHm_v2.0_Chr6g0289951 Rosa chinensis HOM05D004978 ORTHO05D005621 1.2e-27 129.0 85 69.4
RcHm_v2.0_Chr6g0289901 Rosa chinensis HOM05D004978 ORTHO05D005621 6.1e-27 126.7 184 39.1
TAR636G2873 Trochodendron aralioides HOM05D004978 ORTHO05D005621 3.4e-25 120.9 83 71.1
Glyma.02G144333 Glycine max HOM05D004978 ORTHO05D005621 1.7e-24 118.6 81 66.7
HPP92_022056 Vanilla planifolia HOM05D004978 ORTHO05D005621 1.6e-22 112.1 307 30.9
PSO339G3362 Papaver somniferum HOM05D004978 ORTHO05D005621 2.9e-21 107.8 195 33.3
TPR.G34891 Trifolium pratense HOM05D004978 ORTHO05D005621 8.6e-21 106.3 103 52.4
Os01g0773200 Oryza sativa ssp. japonica HOM05D004978 ORTHO05D005621 4.7e-19 100.5 203 33.5
Lalb_Chr06g0162781 Lupinus albus HOM05D004978 ORTHO05D005621 5.4e-15 87.0 64 60.9
Sabra02G0039000 Salix brachista HOM05D004978 ORTHO05D005621 1.2e-14 85.9 142 35.9
SEGI_31795 Sequoiadendron giganteum HOM05D004978 ORTHO05D005621 1.3e-13 82.4 104 45.2
Cre09.g407110 Chlamydomonas reinhardtii HOM05D004978 ORTHO05D005621 5.0e-13 80.5 264 28.4
Dinv22502 Davidia involucrata HOM05D004978 ORTHO05D005621 5.0e-13 80.5 79 53.2
Duzib211G0075 Durio zibethinus HOM05D004978 ORTHO05D005621 5.0e-13 80.5 121 38.0
SEGI_30706 Sequoiadendron giganteum HOM05D004978 ORTHO05D005621 9.5e-12 76.3 55 54.5
TPR.G29273 Trifolium pratense HOM05D004978 ORTHO05D005621 9.5e-12 76.3 41 80.5
QL05p031917 Quercus lobata HOM05D000015 ORTHO05D005621 5.2e-10 70.5 128 38.3
SEGI_08858 Sequoiadendron giganteum HOM05D004978 ORTHO05D005621 4.4e-09 67.4 41 70.7
Potri.002G047875 Populus trichocarpa HOM05D004978 ORTHO05D005621 5.8e-09 67.0 214 31.3
MBI11_g08089_MAGBIO Magnolia biondii HOM05D004978 ORTHO05D005621 6.4e-08 63.5 92 42.4
Os09g0489200 Oryza sativa ssp. japonica HOM05D004419 ORTHO05D005480 6.4e-08 63.5 69 44.9
MCO06G041 Micromonas commoda HOM05D004978 ORTHO05D005621 7.8e-06 56.6 33 69.7


User provided reference genes

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