Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 1.0e-53 213.4 126 100.0
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 1.2e-33 146.7 127 66.1
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 2.0e-33 146.0 127 67.7
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 3.4e-33 145.2 125 67.2
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 3.4e-33 145.2 125 66.4
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 4.4e-33 144.8 122 68.0
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 1.3e-32 143.3 121 66.9
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 1.7e-32 142.9 126 66.7
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 2.2e-32 142.5 123 69.1
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 2.2e-32 142.5 123 66.7
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 2.2e-32 142.5 127 63.8
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 2.2e-32 142.5 121 69.4
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 2.9e-32 142.1 125 64.8
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 1.1e-31 140.2 119 67.2
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 1.1e-31 140.2 118 65.3
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 1.4e-31 139.8 124 63.7
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 1.4e-31 139.8 125 62.4
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 1.4e-31 139.8 118 66.1
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 1.9e-31 139.4 121 66.1
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 1.9e-31 139.4 120 67.5
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 2.4e-31 139.0 124 63.7
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 3.2e-31 138.7 122 66.4
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 3.2e-31 138.7 118 66.9
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 3.2e-31 138.7 118 66.1
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 5.4e-31 137.9 121 64.5
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 1.2e-30 136.7 121 65.3
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 1.6e-30 136.3 124 62.9
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 1.6e-30 136.3 118 65.3
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 2.7e-30 135.6 123 61.0
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 3.5e-30 135.2 124 63.7
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 4.6e-30 134.8 116 64.7
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 1.0e-29 133.7 124 59.7
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.7e-29 132.9 121 64.5
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 3.0e-29 132.1 122 63.1
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 3.0e-29 132.1 118 63.6
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 5.1e-29 131.3 128 58.6
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 6.6e-29 131.0 120 60.8
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 8.6e-29 130.6 123 61.0
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 2.5e-28 129.0 123 62.6
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 4.3e-28 128.3 125 60.8
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 4.3e-28 128.3 125 60.8
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 4.3e-28 128.3 118 63.6
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 5.6e-28 127.9 124 60.5
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 1.2e-27 126.7 121 61.2
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 1.2e-27 126.7 127 62.2
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 2.1e-27 125.9 118 61.9
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 2.1e-27 125.9 127 60.6
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 3.6e-27 125.2 126 60.3
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 3.6e-27 125.2 118 57.6
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 4.7e-27 124.8 126 60.3
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 6.2e-27 124.4 125 59.2
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 1.1e-26 123.6 121 58.7
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 1.1e-26 123.6 128 60.2
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 1.1e-26 123.6 126 59.5
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 3.1e-26 122.1 124 54.8
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 3.1e-26 122.1 122 55.7
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 3.1e-26 122.1 125 56.8
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 5.2e-26 121.3 125 55.2
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 6.8e-26 120.9 120 58.3
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 6.8e-26 120.9 122 58.2
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 8.9e-26 120.6 120 57.5
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 1.5e-25 119.8 125 56.8
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 1.5e-25 119.8 122 57.4
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 3.4e-25 118.6 118 56.8
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 4.4e-25 118.2 121 52.9
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 5.8e-25 117.9 121 52.1
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 5.8e-25 117.9 121 56.2
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 5.8e-25 117.9 118 57.6
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 7.6e-25 117.5 101 66.3
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 2.2e-24 115.9 121 52.1
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 2.9e-24 115.5 99 66.7
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 3.8e-24 115.2 123 55.3
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 4.9e-24 114.8 125 52.8
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 4.9e-24 114.8 120 56.7
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 1.1e-23 113.6 118 56.8
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 1.1e-23 113.6 122 47.5
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 1.9e-23 112.8 124 54.0
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 2.4e-23 112.5 115 57.4
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 5.4e-23 111.3 125 52.8
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 5.4e-23 111.3 176 46.0
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 5.4e-23 111.3 120 50.8
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 5.4e-23 111.3 120 54.2
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 5.4e-23 111.3 122 47.5
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 7.1e-23 110.9 120 52.5
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 9.3e-23 110.5 120 52.5
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 1.2e-22 110.2 120 55.0
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 2.1e-22 109.4 127 54.3
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 3.5e-22 108.6 125 52.0
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 6.0e-22 107.8 125 51.2
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 6.0e-22 107.8 130 51.5
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 7.8e-22 107.5 120 50.8
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 7.8e-22 107.5 120 55.0
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 7.8e-22 107.5 92 70.7
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 2.3e-21 105.9 120 52.5
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 2.3e-21 105.9 118 55.1
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 3.9e-21 105.1 87 66.7
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 6.6e-21 104.4 120 51.7
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 2.5e-20 102.4 121 52.1
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 3.3e-20 102.1 120 50.0
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 5.6e-20 101.3 121 53.7
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 1.3e-19 100.1 101 59.4
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 3.6e-19 98.6 107 52.3
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 6.2e-19 97.8 120 50.0
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 8.1e-19 97.4 116 54.3
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 8.1e-19 97.4 116 54.3
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 1.4e-18 96.7 99 53.5
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 3.1e-18 95.5 111 53.2
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 6.9e-18 94.4 115 53.9
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 6.9e-18 94.4 115 53.9
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 9.0e-18 94.0 124 51.6
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 1.5e-17 93.2 111 50.5
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 2.0e-17 92.8 120 50.0
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 2.6e-17 92.4 119 45.4
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 7.6e-17 90.9 125 44.8
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 7.6e-17 90.9 119 45.4
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 1.3e-16 90.1 107 49.5
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 2.9e-16 89.0 111 50.5
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 1.6e-14 83.2 114 47.4
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 2.1e-14 82.8 84 61.9
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 1.0e-13 80.5 113 43.4
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 8.7e-13 77.4 84 59.5
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 1.1e-12 77.0 118 45.8
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 1.1e-12 77.0 118 45.8
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 1.1e-12 77.0 118 45.8
CARHR196680 Cardamine hirsuta HOM05D004935 ORTHO05D005676 1.9e-12 76.3 85 58.8
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 4.0e-10 68.6 115 43.5
Medtr5g077270 Medicago truncatula HOM05D007893 ORTHO05D010042 5.3e-10 68.2 81 50.6
SEGI_39153 Sequoiadendron giganteum HOM05D004935 ORTHO05D005676 1.2e-09 67.0 109 38.5
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 2.6e-09 65.9 115 43.5
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 3.4e-09 65.5 118 42.4
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 4.5e-09 65.1 127 40.2
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 7.6e-09 64.3 100 40.0
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 1.3e-08 63.5 125 40.0
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 1.3e-08 63.5 130 39.2
Pp3c6_9570 Physcomitrium patens HOM05D004935 ORTHO05D005676 2.2e-08 62.8 120 33.3
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 3.8e-08 62.0 125 39.2
CSS0034638 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 8.4e-08 60.8 40 62.5
EL10Ac2g03210 Beta vulgaris HOM05D004935 ORTHO05D005676 9.3e-07 57.4 57 50.9
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 1.2e-06 57.0 124 35.5
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 1.6e-06 56.6 124 35.5


User provided reference genes

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