Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 0.0e+00 1822.0 944 100.0
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 3.9e-267 925.2 1037 52.7
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 5.9e-263 911.4 1012 53.8
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.4e-253 880.2 1058 51.2
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 6.3e-249 864.8 989 52.7
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 5.3e-248 861.7 1018 53.7
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 1.3e-246 857.1 1017 53.1
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 3.3e-242 842.4 1004 51.6
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 9.7e-242 840.9 1008 52.3
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.4e-240 837.0 1018 52.2
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 2.0e-239 833.2 1017 50.9
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 2.5e-237 826.2 818 58.4
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 4.8e-233 812.0 824 58.6
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.1e-229 800.8 982 50.7
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 1.1e-229 800.8 990 51.3
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 8.3e-225 784.6 1007 49.7
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 1.5e-221 773.9 1025 48.7
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.9e-221 773.5 1020 49.8
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 9.8e-218 761.1 836 53.9
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 2.2e-217 760.0 1081 46.6
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 1.8e-216 756.9 815 55.0
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 2.0e-215 753.4 839 52.8
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 6.6e-214 748.4 876 52.1
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 8.6e-214 748.0 1184 44.3
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 1.5e-213 747.3 824 54.4
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 1.6e-212 743.8 728 57.8
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 6.1e-212 741.9 779 54.8
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 6.1e-212 741.9 828 52.7
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 8.0e-212 741.5 877 51.2
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 1.2e-207 727.6 837 52.4
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 1.6e-207 727.2 997 49.0
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 2.0e-207 726.9 839 52.9
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 5.9e-207 725.3 860 51.3
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 9.5e-205 718.0 832 52.5
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 2.6e-202 709.9 892 49.4
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 7.5e-202 708.4 892 49.3
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 1.9e-200 703.7 1021 45.7
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 3.2e-200 703.0 872 50.1
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 7.8e-199 698.4 798 51.8
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 6.8e-195 685.3 780 53.1
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 1.3e-193 681.0 827 50.9
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 8.3e-193 678.3 833 51.5
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 8.3e-193 678.3 819 51.3
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 1.7e-190 670.6 874 48.9
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 2.5e-189 666.8 854 48.1
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 5.6e-189 665.6 789 49.3
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 2.8e-188 663.3 814 49.6
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 4.7e-188 662.5 833 51.0
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 6.2e-188 662.1 857 48.1
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 1.8e-187 660.6 793 51.3
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 2.6e-186 656.8 819 48.8
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 4.4e-186 656.0 855 47.7
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 5.8e-186 655.6 866 47.3
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 2.2e-185 653.7 861 48.4
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 1.1e-184 651.4 869 46.7
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 1.9e-184 650.6 799 49.7
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 4.1e-184 649.4 823 49.7
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 5.4e-184 649.0 819 48.6
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 2.1e-183 647.1 857 48.3
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 2.1e-183 647.1 871 47.1
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 2.7e-183 646.7 894 46.1
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 4.6e-183 646.0 849 47.7
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 1.3e-182 644.4 849 47.7
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 3.0e-182 643.3 906 45.3
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 6.6e-182 642.1 822 49.3
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 6.6e-182 642.1 945 46.1
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 1.1e-181 641.3 882 45.9
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.5e-181 641.0 906 45.3
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.5e-181 640.2 882 46.1
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 3.3e-181 639.8 822 49.1
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 3.3e-181 639.8 816 48.4
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 5.6e-181 639.0 812 48.3
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 4.7e-180 636.0 893 46.1
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 4.7e-180 636.0 851 45.9
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 4.0e-179 632.9 1130 41.5
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.2e-178 631.3 904 45.5
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 7.6e-178 628.6 807 48.9
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 1.7e-177 627.5 832 48.8
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 8.1e-172 608.6 822 47.4
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 1.8e-171 607.4 912 44.3
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 2.6e-170 603.6 870 45.1
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 8.7e-166 588.6 811 44.8
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 2.1e-164 583.9 785 45.6
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 8.1e-164 582.0 793 45.1
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 5.3e-163 579.3 795 45.4
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 7.6e-162 575.5 793 45.5
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 2.2e-161 573.9 824 44.8
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 2.2e-161 573.9 1071 39.8
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 1.1e-160 571.6 821 43.7
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 2.4e-160 570.5 948 41.9
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 1.6e-159 567.8 913 42.2
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 1.0e-158 565.1 833 44.3
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 1.8e-158 564.3 801 45.4
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 5.1e-158 562.8 801 45.2
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 5.1e-158 562.8 792 46.5
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 1.9e-157 560.8 806 44.0
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 5.6e-157 559.3 811 43.5
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 5.6e-157 559.3 811 43.5
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 1.3e-156 558.1 803 44.8
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 2.1e-156 557.4 818 44.3
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 2.8e-156 557.0 822 43.7
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 3.7e-156 556.6 914 41.8
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 8.1e-156 555.4 815 43.8
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 5.3e-155 552.7 876 43.0
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 1.2e-154 551.6 988 41.7
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 1.2e-154 551.6 811 43.8
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 2.6e-154 550.4 839 43.1
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 3.4e-154 550.1 814 43.7
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 4.5e-154 549.7 890 40.9
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 7.6e-154 548.9 829 43.5
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.0e-153 548.5 806 43.3
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 1.3e-153 548.1 803 44.0
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 1.7e-153 547.7 793 43.9
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 2.1e-151 540.8 802 43.9
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 4.6e-151 539.7 803 43.3
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 2.5e-149 533.9 892 41.0
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 3.3e-149 533.5 777 44.1
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 1.3e-148 531.6 884 40.7
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 3.7e-148 530.0 806 43.7
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 2.4e-147 527.3 829 42.2
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 2.3e-142 510.8 837 41.1
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 9.7e-141 505.4 637 49.3
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 1.5e-138 498.0 806 41.7
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 8.5e-137 492.3 764 42.8
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 2.7e-135 487.3 810 40.0
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 1.4e-134 485.0 805 40.5
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 5.0e-129 466.5 830 41.8
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.1e-128 465.3 827 41.0
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 7.0e-123 446.0 836 40.8
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 4.2e-112 410.2 369 65.3
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.1e-107 395.6 817 37.2
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.1e-107 395.6 817 37.2
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 2.8e-100 370.9 874 34.7
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 4.5e-98 363.6 749 34.3
ECA236G4595 Erigeron canadensis HOM05D003782 ORTHO05D004361 1.7e-92 345.1 528 44.3
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 5.4e-91 340.1 637 37.7
Cpa.g.sc27.74 Carica papaya HOM05D003782 ORTHO05D004361 2.0e-85 321.6 285 58.6
FAN07G0886 Fragaria x ananassa HOM05D003782 ORTHO05D004361 5.0e-81 307.0 285 57.2
Aqoxy6G00197 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 6.2e-71 273.5 341 48.7
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 6.6e-65 253.4 953 27.8
CSS0036804 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.0e-61 241.9 353 47.0
SHI01818 Sapria himalayana HOM05D003782 ORTHO05D004361 7.1e-59 233.4 396 39.9
Lj6g0001672 Lotus japonicus HOM05D003782 ORTHO05D004361 5.8e-53 213.8 322 43.8
Sabra04G0024500 Salix brachista HOM05D003782 ORTHO05D004361 1.2e-50 206.1 147 73.5
Lj6g0027699 Lotus japonicus HOM05D003782 ORTHO05D004361 3.3e-48 198.0 259 44.0
SEGI_34470 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 1.8e-46 192.2 262 46.9
Cpa.g.sc27.75 Carica papaya HOM05D003782 ORTHO05D004361 4.5e-37 161.0 414 34.8
ECA236G3594 Erigeron canadensis HOM05D003782 ORTHO05D004361 3.3e-32 144.8 121 62.8
SEGI_13110 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 9.7e-32 143.3 184 45.7
Zm00001eb006190 Zea mays HOM05D003782 ORTHO05D004361 1.4e-30 139.4 156 47.4
FAN28G2813 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.8e-30 139.0 92 71.7
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 7.2e-27 127.1 111 58.6
arahy.Tifrunner.gnm1.ann1.M5G8HU Arachis hypogaea HOM05D003782 ORTHO05D004361 1.8e-25 122.5 85 72.9
TWI12G0412 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 6.7e-25 120.6 125 55.2
BcaC05g24978 Brassica carinata HOM05D003782 ORTHO05D004361 1.7e-23 115.9 116 52.6
TWI12G0828 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 3.1e-22 111.7 107 55.1
arahy.Tifrunner.gnm1.ann1.S76ADD Arachis hypogaea HOM05D001687 ORTHO05D001608 4.1e-22 111.3 79 72.2
Zm00001eb335960 Zea mays HOM05D003782 ORTHO05D004361 6.5e-20 104.0 118 46.6
MD09G1213100 Malus domestica HOM05D003782 ORTHO05D004361 7.2e-19 100.5 64 71.9
arahy.Tifrunner.gnm1.ann1.IMK82Y Arachis hypogaea HOM05D003782 ORTHO05D004361 1.6e-18 99.4 70 71.4
Zm00001eb432110 Zea mays HOM05D003782 ORTHO05D004361 2.7e-18 98.6 89 53.9
QL05p013418 Quercus lobata HOM05D003782 ORTHO05D004361 3.0e-17 95.1 57 80.7
Zm00001eb179180 Zea mays HOM05D003782 ORTHO05D004361 1.1e-16 93.2 89 51.7
VMungo0331G2027 Vigna mungo HOM05D003782 ORTHO05D004361 9.7e-16 90.1 85 55.3
arahy.Tifrunner.gnm1.ann1.R5EEB5 Arachis hypogaea HOM05D003782 ORTHO05D004361 2.2e-15 89.0 105 49.5
VMungo0251G1485 Vigna mungo HOM05D003782 ORTHO05D004361 2.8e-15 88.6 59 71.2
SHI01816 Sapria himalayana HOM05D005377 ORTHO05D003034 8.2e-15 87.0 101 51.5
TAR626G0244 Trochodendron aralioides HOM05D003782 ORTHO05D004361 1.8e-14 85.9 69 63.8
CSS0006007 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.4e-14 85.5 60 76.7
CSS0040150 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 5.5e-11 74.3 67 58.2
Zm00001eb174580 Zea mays HOM05D003782 ORTHO05D004361 5.5e-11 74.3 66 53.0
Zm00001eb208870 Zea mays HOM05D000229 ORTHO05D004361 1.6e-10 72.8 126 35.7
arahy.Tifrunner.gnm1.ann1.IG0W9M Arachis hypogaea HOM05D003782 ORTHO05D004361 4.7e-10 71.2 78 48.7
CARHR034020 Cardamine hirsuta HOM05D003782 ORTHO05D004361 3.0e-09 68.6 82 46.3
Nn1g04009 Nelumbo nucifera HOM05D003782 ORTHO05D004361 6.7e-09 67.4 62 59.7
Glyma.04G160500 Glycine max HOM05D003782 ORTHO05D004361 8.8e-09 67.0 97 40.2
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 8.8e-09 67.0 44 75.0
Zm00001eb032810 Zea mays HOM05D003782 ORTHO05D004361 1.7e-07 62.8 60 48.3
MBI19_g07393_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D004199 1.8e-06 59.3 54 53.7
MBI19_g13594_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 1.8e-06 59.3 71 43.7
ATR0561G103 Amborella trichopoda HOM05D003782 ORTHO05D004361 4.1e-06 58.2 119 37.8
Zm00001eb274810 Zea mays HOM05D003782 ORTHO05D004361 5.3e-06 57.8 50 56.0


User provided reference genes

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