Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014681.1 Olea europaea HOM05D003698 ORTHO05D004320 4.4e-152 541.2 262 100.0
Oeu014677.1 Olea europaea HOM05D003698 ORTHO05D004320 9.9e-128 460.3 229 96.5
MSTRG.4868 Avicennia marina HOM05D003698 ORTHO05D004320 4.3e-115 418.3 222 88.7
SGA_v2.0_scaffold11G05655 Striga asiatica HOM05D003698 ORTHO05D004320 1.1e-113 413.7 223 88.3
Actinidia09997 Actinidia chinensis HOM05D003698 ORTHO05D004320 3.1e-113 412.1 224 87.5
Dinv43781 Davidia involucrata HOM05D003698 ORTHO05D004320 4.0e-113 411.8 222 87.8
Nn1g01429 Nelumbo nucifera HOM05D003698 ORTHO05D004320 6.9e-113 411.0 229 84.3
Dinv32446 Davidia involucrata HOM05D003698 ORTHO05D004320 9.0e-113 410.6 222 88.3
COL.COLO4_12672 Corchorus olitorius HOM05D003698 ORTHO05D004320 1.2e-112 410.2 224 86.6
Thecc.01G363600 Theobroma cacao HOM05D003698 ORTHO05D004320 1.5e-112 409.8 224 86.6
Gohir.A12G104900 Gossypium hirsutum HOM05D003698 ORTHO05D004320 2.0e-112 409.5 224 86.2
CSS0014093 Camellia sinensis var. sinensis HOM05D003698 ORTHO05D004320 3.4e-112 408.7 222 87.4
Hma1.2p1_0033F.1_g020410 Hydrangea macrophylla HOM05D003698 ORTHO05D004320 7.6e-112 407.5 222 86.5
Dinv43783 Davidia involucrata HOM05D003698 ORTHO05D004320 9.9e-112 407.1 222 86.9
Duzib133G0563 Durio zibethinus HOM05D003698 ORTHO05D004320 1.3e-111 406.8 224 86.6
Cfa003959 Carpinus fangiana HOM05D003698 ORTHO05D004320 1.7e-111 406.4 223 85.7
Gohir.D12G108800 Gossypium hirsutum HOM05D003698 ORTHO05D004320 2.2e-111 406.0 224 86.6
Gorai.008G117900 Gossypium raimondii HOM05D003698 ORTHO05D004320 2.2e-111 406.0 224 86.6
Gorai.004G157100 Gossypium raimondii HOM05D003698 ORTHO05D004320 3.8e-111 405.2 222 86.5
CSS0025539 Camellia sinensis var. sinensis HOM05D003698 ORTHO05D004320 8.4e-111 404.1 219 87.7
Gohir.D08G151400 Gossypium hirsutum HOM05D003698 ORTHO05D004320 1.1e-110 403.7 222 86.0
GSVIVG01026838001 Vitis vinifera HOM05D003698 ORTHO05D004320 1.4e-110 403.3 223 85.7
TAR629G2702 Trochodendron aralioides HOM05D003698 ORTHO05D004320 3.2e-110 402.1 222 85.1
arahy.Tifrunner.gnm1.ann1.51RIH8 Arachis hypogaea HOM05D003698 ORTHO05D004320 5.5e-110 401.4 220 85.5
CiPaw.01G057600 Carya illinoinensis HOM05D003698 ORTHO05D004320 7.1e-110 401.0 222 84.7
Rhsim07G0018200 Rhododendron simsii HOM05D003698 ORTHO05D004320 9.3e-110 400.6 222 85.1
arahy.Tifrunner.gnm1.ann1.L2MSK1 Arachis hypogaea HOM05D003698 ORTHO05D004320 1.6e-109 399.8 220 85.5
Cc02_g37580 Coffea canephora HOM05D003698 ORTHO05D004320 1.6e-109 399.8 222 85.1
Gohir.A08G129900 Gossypium hirsutum HOM05D003698 ORTHO05D004320 2.1e-109 399.4 222 84.7
TWI59G0439 Tripterygium wilfordii HOM05D003698 ORTHO05D004320 2.1e-109 399.4 224 81.7
Potri.014G080300 Populus trichocarpa HOM05D003698 ORTHO05D004320 2.7e-109 399.1 223 85.2
arahy.Tifrunner.gnm1.ann1.0R79PA Arachis hypogaea HOM05D003698 ORTHO05D004320 3.5e-109 398.7 220 85.0
Potri.014G080500 Populus trichocarpa HOM05D003698 ORTHO05D004320 3.5e-109 398.7 222 85.1
Glyma.18G229800 Glycine max HOM05D003698 ORTHO05D004320 4.6e-109 398.3 220 85.5
VMungo1383G3090 Vigna mungo HOM05D003698 ORTHO05D004320 7.9e-109 397.5 221 84.2
Zm00001eb065790 Zea mays HOM05D003698 ORTHO05D004320 7.9e-109 397.5 222 83.3
Manes.05G037500 Manihot esculenta HOM05D003698 ORTHO05D004320 1.0e-108 397.1 223 83.9
SalBow5G4069 Salvia bowleyana HOM05D003698 ORTHO05D004320 1.0e-108 397.1 222 82.4
TWI59G0409 Tripterygium wilfordii HOM05D003698 ORTHO05D004320 1.3e-108 396.7 224 81.7
Eucgr.E00182 Eucalyptus grandis HOM05D003698 ORTHO05D004320 1.8e-108 396.4 224 83.5
MD01G1053400 Malus domestica HOM05D003698 ORTHO05D004320 2.3e-108 396.0 221 83.7
Sabra14G0058400 Salix brachista HOM05D003698 ORTHO05D004320 2.3e-108 396.0 216 85.6
Nitab4.5_0010110g0030 Nicotiana tabacum HOM05D003698 ORTHO05D004320 3.0e-108 395.6 228 82.0
Glyma.09G262400 Glycine max HOM05D003698 ORTHO05D004320 3.9e-108 395.2 220 84.1
Manes.01G259900 Manihot esculenta HOM05D003698 ORTHO05D004320 5.1e-108 394.8 222 83.8
Nitab4.5_0010827g0020 Nicotiana tabacum HOM05D003698 ORTHO05D004320 5.1e-108 394.8 228 81.6
QL08p049567 Quercus lobata HOM05D003698 ORTHO05D004320 5.1e-108 394.8 224 81.2
ECA236G4925 Erigeron canadensis HOM05D003698 ORTHO05D004320 6.7e-108 394.4 222 81.1
Os04g0682300 Oryza sativa ssp. japonica HOM05D003698 ORTHO05D004320 8.7e-108 394.0 222 82.0
HanXRQChr04g0121661 Helianthus annuus HOM05D003698 ORTHO05D004320 1.1e-107 393.7 224 80.8
HanXRQChr06g0169891 Helianthus annuus HOM05D003698 ORTHO05D004320 1.5e-107 393.3 220 82.3
PGR042G0708 Punica granatum HOM05D003698 ORTHO05D004320 1.5e-107 393.3 222 82.9
PGSC0003DMG400021636 Solanum tuberosum HOM05D003698 ORTHO05D004320 1.5e-107 393.3 229 81.2
Nitab4.5_0001702g0210 Nicotiana tabacum HOM05D003698 ORTHO05D004320 1.9e-107 392.9 225 82.2
Phvul.008G068100 Phaseolus vulgaris HOM05D003698 ORTHO05D004320 1.9e-107 392.9 221 83.3
TWI14G1008 Tripterygium wilfordii HOM05D003698 ORTHO05D004320 3.3e-107 392.1 224 80.8
unitig_22.g6808 Utricularia gibba HOM05D003698 ORTHO05D004320 3.3e-107 392.1 222 83.8
Aqoxy7G00375 Aquilegia oxysepala HOM05D003698 ORTHO05D004320 4.3e-107 391.7 223 83.4
MD07G1141700 Malus domestica HOM05D003698 ORTHO05D004320 4.3e-107 391.7 221 83.3
PSO478G0134 Papaver somniferum HOM05D003698 ORTHO05D004320 5.6e-107 391.3 222 81.1
Prupe.2G162400 Prunus persica HOM05D003698 ORTHO05D004320 5.6e-107 391.3 223 82.5
Sopen05g028080 Solanum pennellii HOM05D003698 ORTHO05D004320 5.6e-107 391.3 229 80.3
Sopen08g004500 Solanum pennellii HOM05D003698 ORTHO05D004320 5.6e-107 391.3 229 80.8
Solyc08g008670.3 Solanum lycopersicum HOM05D003698 ORTHO05D004320 7.4e-107 391.0 229 80.8
CANSAT56G2897 Cannabis sativa HOM05D003698 ORTHO05D004320 9.6e-107 390.6 222 82.0
PSO782G3808 Papaver somniferum HOM05D003698 ORTHO05D004320 9.6e-107 390.6 222 81.1
Solyc05g048760.3 Solanum lycopersicum HOM05D003698 ORTHO05D004320 9.6e-107 390.6 229 80.3
ATR0680G146 Amborella trichopoda HOM05D003698 ORTHO05D004320 1.3e-106 390.2 220 81.8
RcHm_v2.0_Chr1g0353671 Rosa chinensis HOM05D003698 ORTHO05D004320 1.6e-106 389.8 222 80.6
CDE08G1212 Ceratophyllum demersum HOM05D003698 ORTHO05D004320 2.1e-106 389.4 223 81.6
FvH4_7g13630 Fragaria vesca HOM05D003698 ORTHO05D004320 3.7e-106 388.7 221 80.5
FAN01G1997 Fragaria x ananassa HOM05D003698 ORTHO05D004320 3.7e-106 388.7 221 80.5
FAN06G0259 Fragaria x ananassa HOM05D003698 ORTHO05D004320 3.7e-106 388.7 221 80.5
Peaxi162Scf00397g00424 Petunia axillaris HOM05D003698 ORTHO05D004320 8.2e-106 387.5 228 79.4
Medtr7g076670 Medicago truncatula HOM05D003698 ORTHO05D004320 1.1e-105 387.1 220 81.8
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 1.4e-105 386.7 261 73.9
Lj1g0021860 Lotus japonicus HOM05D003698 ORTHO05D004320 1.8e-105 386.3 221 81.9
PGR044G0179 Punica granatum HOM05D003698 ORTHO05D004320 1.8e-105 386.3 222 82.0
MBI18_g09776_MAGBIO Magnolia biondii HOM05D003698 ORTHO05D004320 3.1e-105 385.6 265 72.1
Psat3g111000 Pisum sativum HOM05D003698 ORTHO05D004320 3.1e-105 385.6 221 81.4
CDE05G2621 Ceratophyllum demersum HOM05D003698 ORTHO05D004320 6.9e-105 384.4 223 80.3
Atru.chr5.444 Acer truncatum HOM05D003698 ORTHO05D004320 3.4e-104 382.1 204 87.7
Ca_07888_v3 Cicer arietinum L. HOM05D003698 ORTHO05D004320 3.4e-104 382.1 221 79.6
THA.LOC104827595 Tarenaya hassleriana HOM05D003698 ORTHO05D004320 7.6e-104 380.9 222 77.9
Sc02g0002070 Simmondsia chinensis HOM05D003698 ORTHO05D004320 1.0e-103 380.6 224 79.5
PGSC0003DMG400013702 Solanum tuberosum HOM05D003698 ORTHO05D004320 1.0e-103 380.6 225 80.4
THA.LOC104817282 Tarenaya hassleriana HOM05D003698 ORTHO05D004320 2.2e-103 379.4 223 78.9
ClCG11G000500 Citrullus lanatus HOM05D003698 ORTHO05D004320 4.9e-103 378.3 220 80.9
Ciclev10024269m.g Citrus clementina HOM05D003698 ORTHO05D004320 4.9e-103 378.3 258 72.9
Hund16943 Selenicereus undatus HOM05D003698 ORTHO05D004320 4.9e-103 378.3 222 80.6
MELO3C026482.2 Cucumis melo HOM05D003698 ORTHO05D004320 6.5e-103 377.9 220 80.9
Aa31LG1G27240 Aethionema arabicum HOM05D003698 ORTHO05D004320 8.4e-103 377.5 223 78.9
SGA_v2.0_scaffold43G16443 Striga asiatica HOM05D003698 ORTHO05D004320 8.4e-103 377.5 205 86.8
CSS0039842 Camellia sinensis var. sinensis HOM05D003698 ORTHO05D004320 1.4e-102 376.7 215 85.1
Solyc05g046340.2 Solanum lycopersicum HOM05D003698 ORTHO05D004320 2.5e-102 375.9 225 79.1
Lalb_Chr04g0256721 Lupinus albus HOM05D003698 ORTHO05D004320 3.2e-102 375.6 221 80.1
CiPaw.02G028200 Carya illinoinensis HOM05D003698 ORTHO05D004320 5.5e-102 374.8 226 79.6
Sed0025976 Sechium edule HOM05D003698 ORTHO05D004320 1.2e-101 373.6 219 79.5
A03p25370 Brassica napus HOM05D003698 ORTHO05D004320 2.7e-101 372.5 222 77.5
AL4G44990 Arabidopsis lyrata HOM05D003698 ORTHO05D004320 6.0e-101 371.3 222 77.0
BcaC01g05105 Brassica carinata HOM05D003698 ORTHO05D004320 6.0e-101 371.3 222 77.0
BolC3t15377H Brassica oleracea HOM05D003698 ORTHO05D004320 6.0e-101 371.3 222 77.0
BraA03t11743Z Brassica rapa HOM05D003698 ORTHO05D004320 7.9e-101 370.9 222 76.6
AT2G45790 Arabidopsis thaliana HOM05D003698 ORTHO05D004320 1.0e-100 370.5 222 77.5
BcaB01g03252 Brassica carinata HOM05D003698 ORTHO05D004320 1.0e-100 370.5 222 77.0
AUR62036720 Chenopodium quinoa HOM05D003698 ORTHO05D004320 1.0e-100 370.5 222 78.8
Thhalv10001604m.g Eutrema salsugineum HOM05D003698 ORTHO05D004320 1.0e-100 370.5 222 76.6
Mapoly0004s0121 Marchantia polymorpha HOM05D003698 ORTHO05D004320 1.0e-100 370.5 221 79.2
BraA04t18865Z Brassica rapa HOM05D003698 ORTHO05D004320 1.3e-100 370.2 222 77.0
C03p30280 Brassica napus HOM05D003698 ORTHO05D004320 1.8e-100 369.8 222 76.6
FAN10G2510 Fragaria x ananassa HOM05D004612 ORTHO05D004940 2.3e-100 369.4 214 79.9
BolC4t28682H Brassica oleracea HOM05D003698 ORTHO05D004320 6.7e-100 367.9 222 76.6
A04p34040 Brassica napus HOM05D003698 ORTHO05D004320 8.7e-100 367.5 222 76.6
SMO367G1007 Selaginella moellendorffii HOM05D003698 ORTHO05D004320 8.7e-100 367.5 222 77.5
C04p71840 Brassica napus HOM05D003698 ORTHO05D004320 1.1e-99 367.1 221 76.9
Carub.0004s2849 Capsella rubella HOM05D003698 ORTHO05D004320 1.1e-99 367.1 222 76.6
BcaB02g09006 Brassica carinata HOM05D003698 ORTHO05D004320 1.5e-99 366.7 222 76.1
CARHR141060 Cardamine hirsuta HOM05D003698 ORTHO05D004320 1.5e-99 366.7 222 76.1
BcaC02g12181 Brassica carinata HOM05D003698 ORTHO05D004320 2.5e-99 365.9 222 75.7
C04p06720 Brassica napus HOM05D003698 ORTHO05D004320 2.5e-99 365.9 222 75.7
BolC4t22293H Brassica oleracea HOM05D003698 ORTHO05D004320 2.5e-99 365.9 222 75.7
A05p05780 Brassica napus HOM05D003698 ORTHO05D004320 4.3e-99 365.2 222 75.7
BraA05t19544Z Brassica rapa HOM05D003698 ORTHO05D004320 4.3e-99 365.2 222 75.7
Sp4g27860 Schrenkiella parvula HOM05D003698 ORTHO05D004320 2.2e-98 362.8 222 75.7
Peaxi162Scf00246g01118 Petunia axillaris HOM05D003698 ORTHO05D004320 2.8e-98 362.5 228 75.0
Ah.13g077050 Amaranthus hybridus HOM05D003698 ORTHO05D004320 1.8e-97 359.8 249 70.3
CsaV3_5G014110 Cucumis sativus L. HOM05D003698 ORTHO05D004320 1.8e-97 359.8 204 82.8
BcaC02g07054 Brassica carinata HOM05D003698 ORTHO05D004320 2.0e-96 356.3 222 74.8
Pp3c23_11670 Physcomitrium patens HOM05D003698 ORTHO05D004320 2.6e-96 355.9 219 74.9
Sopen05g027620 Solanum pennellii HOM05D003698 ORTHO05D004320 1.1e-94 350.5 225 75.6
SHI30460 Sapria himalayana HOM05D003698 ORTHO05D004320 5.5e-94 348.2 207 78.3
DCAR_008599 Daucus carota HOM05D003698 ORTHO05D004320 1.6e-93 346.7 202 80.7
CBR_g41657 Chara braunii HOM05D003698 ORTHO05D004320 2.1e-93 346.3 223 72.6
Lj7A516T66 Lonicera japonica HOM05D003698 ORTHO05D004320 2.1e-93 346.3 206 77.7
CBR_g44345 Chara braunii HOM05D003698 ORTHO05D004320 2.7e-93 345.9 223 72.6
Eucgr.E00184 Eucalyptus grandis HOM05D003698 ORTHO05D004320 4.6e-93 345.1 187 85.0
SalBow5G5099 Salvia bowleyana HOM05D003698 ORTHO05D004320 7.9e-93 344.4 188 85.1
TWI59G0950 Tripterygium wilfordii HOM05D003698 ORTHO05D004320 7.9e-93 344.4 188 84.6
Cre14.g626900 Chlamydomonas reinhardtii HOM05D003698 ORTHO05D004320 2.3e-92 342.8 222 71.6
CAN.G134.78 Capsicum annuum HOM05D003698 ORTHO05D004320 3.9e-92 342.0 191 84.3
PGSC0003DMG400005806 Solanum tuberosum HOM05D003698 ORTHO05D004320 3.9e-92 342.0 193 84.5
Lsat_1_v5_gn_7_5261 Lactuca sativa HOM05D003698 ORTHO05D004320 1.5e-91 340.1 221 71.9
EL10Ac1g02076 Beta vulgaris HOM05D003698 ORTHO05D004320 9.1e-89 330.9 328 54.0
EL10Ac7g16340 Beta vulgaris HOM05D003698 ORTHO05D004320 7.7e-88 327.8 222 72.1
CBR_g4022 Chara braunii HOM05D003698 ORTHO05D004320 2.5e-86 322.8 223 65.9
PRCOL_00001907 Prasinoderma coloniale HOM05D003698 ORTHO05D004320 3.2e-86 322.4 224 67.9
Migut.N01427 Erythranthe guttata HOM05D003698 ORTHO05D004320 1.1e-83 313.9 176 85.8
RhsimUnG0002300 Rhododendron simsii HOM05D003698 ORTHO05D004320 1.1e-83 313.9 248 65.7
AagrBONN_evm.TU.Sc2ySwM_117.907 Anthoceros agrestis HOM05D003698 ORTHO05D004320 1.4e-81 307.0 189 75.7
MCO01G022 Micromonas commoda HOM05D003698 ORTHO05D004320 5.9e-80 301.6 216 63.4
Haze_15453 Corylus avellana HOM05D003698 ORTHO05D004320 9.4e-78 294.3 162 85.8
Cpa.g.sc170.35 Carica papaya HOM05D003698 ORTHO05D004320 8.8e-76 287.7 152 86.8
MSTRG.28213 Avicennia marina HOM05D003698 ORTHO05D004320 1.1e-75 287.3 159 88.1
Haze_24893 Corylus avellana HOM05D003698 ORTHO05D004320 4.1e-73 278.9 187 74.3
SEGI_40114 Sequoiadendron giganteum HOM05D003698 ORTHO05D004320 7.0e-73 278.1 161 82.0
Lj9A580G54 Lonicera japonica HOM05D003698 ORTHO05D004320 5.9e-72 275.0 154 81.8
Cfa027079 Carpinus fangiana HOM05D003698 ORTHO05D004320 8.8e-68 261.2 231 52.8
Nn6g33536 Nelumbo nucifera HOM05D003698 ORTHO05D004320 3.4e-67 259.2 215 63.7
CSS0016921 Camellia sinensis var. sinensis HOM05D003698 ORTHO05D004320 7.5e-67 258.1 133 90.2
Haze_05811 Corylus avellana HOM05D003698 ORTHO05D004320 1.1e-65 254.2 154 79.2
AUR62013874 Chenopodium quinoa HOM05D003698 ORTHO05D004320 3.5e-64 249.2 144 81.9
CSS0047600 Camellia sinensis var. sinensis HOM05D003698 ORTHO05D004320 4.7e-61 238.8 156 75.6
FAN03G0966 Fragaria x ananassa HOM05D003698 ORTHO05D004320 2.4e-57 226.5 120 85.0
HPP92_000764 Vanilla planifolia HOM05D003698 ORTHO05D004320 3.1e-57 226.1 174 67.2
FAN06G0644 Fragaria x ananassa HOM05D003698 ORTHO05D004320 2.8e-53 213.0 125 78.4
Cpa.g.c46781 Carica papaya HOM05D003698 ORTHO05D004320 5.0e-47 192.2 96 94.8
RcHm_v2.0_Chr1g0364561 Rosa chinensis HOM05D003698 ORTHO05D004320 9.5e-38 161.4 90 84.4
Prupe.8G033900 Prunus persica HOM05D003698 ORTHO05D004320 2.1e-37 160.2 89 83.1
Cpa.g.c40434 Carica papaya HOM05D003698 ORTHO05D004320 9.8e-35 151.4 92 78.3
Solyc08g076550.3 Solanum lycopersicum HOM05D005023 ORTHO05D006009 1.1e-28 131.3 71 83.1
CANSAT25G0181 Cannabis sativa HOM05D003698 ORTHO05D004320 6.8e-28 128.6 69 82.6
RcHm_v2.0_Chr4g0404481 Rosa chinensis HOM05D003698 ORTHO05D004320 2.1e-24 117.1 65 83.1
RcHm_v2.0_Chr5g0045001 Rosa chinensis HOM05D003698 ORTHO05D004320 2.3e-23 113.6 85 69.4
MBI17_g19515_MAGBIO Magnolia biondii HOM05D003698 ORTHO05D004320 3.1e-20 103.2 65 70.8
TPR.G40455 Trifolium pratense HOM05D003698 ORTHO05D004320 7.6e-19 98.6 62 71.0
CANSAT11G2537 Cannabis sativa HOM05D003698 ORTHO05D004320 8.7e-15 85.1 44 79.5
Haze_05812 Corylus avellana HOM05D003698 ORTHO05D004320 1.5e-11 74.3 57 59.6
Hund27303 Selenicereus undatus HOM05D000402 ORTHO05D000263 9.9e-11 71.6 37 89.2
TPR.G18261 Trifolium pratense HOM05D003698 ORTHO05D004320 6.4e-10 68.9 62 56.5
ClCG03G012620 Citrullus lanatus HOM05D003698 ORTHO05D004320 1.4e-09 67.8 37 78.4
TPR.G42 Trifolium pratense HOM05D003698 ORTHO05D004320 3.2e-09 66.6 30 90.0
MBI17_g19513_MAGBIO Magnolia biondii HOM05D003698 ORTHO05D004320 9.3e-09 65.1 38 76.3
TAR636G2570 Trochodendron aralioides HOM05D003698 ORTHO05D004320 2.1e-08 63.9 79 45.6
Solyc08g076560.1 Solanum lycopersicum HOM05D003698 ORTHO05D391923 3.0e-07 60.1 40 67.5
CAN.G134.80 Capsicum annuum HOM05D003698 ORTHO05D004320 2.5e-06 57.0 37 67.6
CSS0029944 Camellia sinensis var. sinensis HOM05D003698 ORTHO05D004320 7.3e-06 55.5 53 52.8


User provided reference genes

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