Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014679.1 Olea europaea HOM05D041444 ORTHO05D004940 2.9e-158 562.0 310 100.0
Oeu048827.1 Olea europaea HOM05D041444 ORTHO05D290374 9.6e-21 105.1 89 62.9
Oeu041832.1 Olea europaea HOM05D041444 ORTHO05D288360 7.8e-15 85.5 89 56.2
Oeu014678.1 Olea europaea HOM05D004612 ORTHO05D004940 2.3e-14 84.0 55 83.6
Cc02_g37600 Coffea canephora HOM05D004612 ORTHO05D004940 8.1e-12 75.5 58 67.2
FAN06G2470 Fragaria x ananassa HOM05D004612 ORTHO05D004940 1.8e-11 74.3 72 59.7
FvH4_7g13631 Fragaria vesca HOM05D004612 ORTHO05D004940 5.3e-11 72.8 55 69.1
FAN01G1921 Fragaria x ananassa HOM05D000092 ORTHO05D004940 5.3e-11 72.8 55 69.1
FAN03G2220 Fragaria x ananassa HOM05D004612 ORTHO05D004940 5.3e-11 72.8 55 69.1
FAN06G3441 Fragaria x ananassa HOM05D004612 ORTHO05D004940 5.3e-11 72.8 55 69.1
FAN10G2510 Fragaria x ananassa HOM05D004612 ORTHO05D004940 5.3e-11 72.8 55 69.1
SalBow3G1907 Salvia bowleyana HOM05D004612 ORTHO05D004940 5.3e-11 72.8 55 70.9
CiPaw.02G028400 Carya illinoinensis HOM05D004612 ORTHO05D004940 6.9e-11 72.4 58 62.1
Eucgr.D02267 Eucalyptus grandis HOM05D004612 ORTHO05D004940 6.9e-11 72.4 59 66.1
Haze_15464 Corylus avellana HOM05D004612 ORTHO05D004940 1.5e-10 71.2 58 63.8
GSVIVG01026844001 Vitis vinifera HOM05D004612 ORTHO05D004940 1.5e-10 71.2 55 67.3
QL08p049561 Quercus lobata HOM05D004612 ORTHO05D004940 2.0e-10 70.9 57 63.2
Duzib133G0359 Durio zibethinus HOM05D004612 ORTHO05D004940 2.6e-10 70.5 55 67.3
Cfa003958 Carpinus fangiana HOM05D004612 ORTHO05D004940 3.4e-10 70.1 58 62.1
Sopen05g028090 Solanum pennellii HOM05D004612 ORTHO05D004940 3.4e-10 70.1 54 68.5
Dinv32447 Davidia involucrata HOM05D004612 ORTHO05D004940 4.5e-10 69.7 58 62.1
Manes.12G065000 Manihot esculenta HOM05D004612 ORTHO05D004940 4.5e-10 69.7 58 62.1
Nn3g17842 Nelumbo nucifera HOM05D004612 ORTHO05D004940 4.5e-10 69.7 55 69.1
Thecc.01G363500 Theobroma cacao HOM05D004612 ORTHO05D004940 4.5e-10 69.7 60 63.3
Ciclev10024326m.g Citrus clementina HOM05D004612 ORTHO05D004940 5.8e-10 69.3 55 67.3
Gohir.A11G082600 Gossypium hirsutum HOM05D004612 ORTHO05D004940 5.8e-10 69.3 54 66.7
Rhsim07G0018100 Rhododendron simsii HOM05D004612 ORTHO05D004940 5.8e-10 69.3 58 60.3
CSS0046042 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 7.6e-10 68.9 55 65.5
Gorai.007G097300 Gossypium raimondii HOM05D004612 ORTHO05D004940 7.6e-10 68.9 54 66.7
MD07G1141600 Malus domestica HOM05D004612 ORTHO05D004940 7.6e-10 68.9 54 66.7
vmacro13313 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 7.6e-10 68.9 58 60.3
VMungo1127G0842 Vigna mungo HOM05D004612 ORTHO05D004940 7.6e-10 68.9 60 61.7
MD01G1053500 Malus domestica HOM05D004612 ORTHO05D004940 9.9e-10 68.6 54 64.8
TWI59G0622 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 9.9e-10 68.6 55 65.5
TAR629G0951 Trochodendron aralioides HOM05D004612 ORTHO05D004940 9.9e-10 68.6 58 62.1
Migut.B01722 Erythranthe guttata HOM05D004612 ORTHO05D004940 1.3e-09 68.2 55 65.5
ClCG05G001720 Citrullus lanatus HOM05D004612 ORTHO05D004940 1.7e-09 67.8 55 63.6
HanXRQChr16g0523031 Helianthus annuus HOM05D004612 ORTHO05D004940 1.7e-09 67.8 73 52.1
Peaxi162Scf00397g00041 Petunia axillaris HOM05D004612 ORTHO05D004940 1.7e-09 67.8 54 64.8
Potri.014G080600 Populus trichocarpa HOM05D004612 ORTHO05D004940 1.7e-09 67.8 55 65.5
Sed0015875 Sechium edule HOM05D004612 ORTHO05D004940 1.7e-09 67.8 56 62.5
AL6G52840 Arabidopsis lyrata HOM05D004612 ORTHO05D004940 2.2e-09 67.4 58 60.3
AT4G00590 Arabidopsis thaliana HOM05D004612 ORTHO05D004940 2.2e-09 67.4 58 60.3
CSS0006325 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 2.2e-09 67.4 55 63.6
CSS0014629 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 2.2e-09 67.4 55 63.6
ECA234G1569 Erigeron canadensis HOM05D004612 ORTHO05D004940 2.2e-09 67.4 56 62.5
Solyc05g048770.3 Solanum lycopersicum HOM05D004612 ORTHO05D004940 2.2e-09 67.4 54 66.7
Actinidia09998 Actinidia chinensis HOM05D004612 ORTHO05D004940 2.9e-09 67.0 55 61.8
MELO3C006131.2 Cucumis melo HOM05D004612 ORTHO05D004940 2.9e-09 67.0 57 59.6
CsaV3_3G009110 Cucumis sativus L. HOM05D004612 ORTHO05D004940 2.9e-09 67.0 57 59.6
Hma1.2p1_0033F.1_g020400 Hydrangea macrophylla HOM05D004612 ORTHO05D004940 2.9e-09 67.0 58 60.3
Os04g0682500 Oryza sativa ssp. japonica HOM05D004612 ORTHO05D004940 2.9e-09 67.0 57 57.9
SGA_v2.0_scaffold95G28856 Striga asiatica HOM05D004612 ORTHO05D004940 2.9e-09 67.0 58 56.9
Lsat_1_v5_gn_4_36480 Lactuca sativa HOM05D004612 ORTHO05D004940 3.8e-09 66.6 76 51.3
Lj9C580G6 Lonicera japonica HOM05D004612 ORTHO05D004940 3.8e-09 66.6 55 61.8
Atru.chr5.445 Acer truncatum HOM05D004612 ORTHO05D004940 6.4e-09 65.9 55 63.6
BcaB01g02261 Brassica carinata HOM05D004612 ORTHO05D004940 8.4e-09 65.5 58 58.6
Carub.0006s3663 Capsella rubella HOM05D004612 ORTHO05D004940 8.4e-09 65.5 58 58.6
CAN.G718.1 Capsicum annuum HOM05D004612 ORTHO05D004940 8.4e-09 65.5 54 64.8
MSTRG.17249 Avicennia marina HOM05D004612 ORTHO05D004940 1.1e-08 65.1 54 63.0
Cpa.g.sc20.34 Carica papaya HOM05D004612 ORTHO05D004940 1.1e-08 65.1 57 57.9
Glyma.03G096900 Glycine max HOM05D004612 ORTHO05D004940 1.1e-08 65.1 56 58.9
PSO782G5368 Papaver somniferum HOM05D004612 ORTHO05D004940 1.1e-08 65.1 60 53.3
PGR031G1383 Punica granatum HOM05D004612 ORTHO05D004940 1.1e-08 65.1 57 64.9
A09p00400 Brassica napus HOM05D004612 ORTHO05D004940 1.4e-08 64.7 58 56.9
BraA09t35721Z Brassica rapa HOM05D004612 ORTHO05D004940 1.4e-08 64.7 58 56.9
Lj3g0020312 Lotus japonicus HOM05D004612 ORTHO05D004940 1.9e-08 64.3 56 58.9
Aa31LG5G400 Aethionema arabicum HOM05D004612 ORTHO05D004940 2.4e-08 63.9 58 55.2
BcaB01g02263 Brassica carinata HOM05D004612 ORTHO05D004940 2.4e-08 63.9 58 56.9
BcaC04g24158 Brassica carinata HOM05D004612 ORTHO05D004940 2.4e-08 63.9 58 56.9
C09p00500 Brassica napus HOM05D004612 ORTHO05D004940 2.4e-08 63.9 58 56.9
BolC9t52984H Brassica oleracea HOM05D004612 ORTHO05D004940 2.4e-08 63.9 58 56.9
Thhalv10028700m.g Eutrema salsugineum HOM05D004612 ORTHO05D004940 2.4e-08 63.9 58 56.9
Lalb_Chr10g0097231 Lupinus albus HOM05D004612 ORTHO05D004940 2.4e-08 63.9 56 58.9
PSO063G2700 Papaver somniferum HOM05D004612 ORTHO05D004940 3.2e-08 63.5 60 53.3
TPR.G4369 Trifolium pratense HOM05D004612 ORTHO05D004940 3.2e-08 63.5 57 54.4
unitig_0.g1278 Utricularia gibba HOM05D004612 ORTHO05D004940 3.2e-08 63.5 58 60.3
arahy.Tifrunner.gnm1.ann1.4I97V1 Arachis hypogaea HOM05D004612 ORTHO05D004940 4.2e-08 63.2 56 57.1
Ca_27541_v3 Cicer arietinum L. HOM05D004612 ORTHO05D004940 4.2e-08 63.2 56 58.9
Medtr8g031580 Medicago truncatula HOM05D004612 ORTHO05D004940 4.2e-08 63.2 59 54.2
Nitab4.5_0002608g0040 Nicotiana tabacum HOM05D004612 ORTHO05D004940 7.1e-08 62.4 51 64.7
THA.LOC104801450 Tarenaya hassleriana HOM05D004612 ORTHO05D004940 7.1e-08 62.4 56 58.9
arahy.Tifrunner.gnm1.ann1.B6YWYF Arachis hypogaea HOM05D004612 ORTHO05D004940 1.6e-07 61.2 56 55.4
Nitab4.5_0010827g0010 Nicotiana tabacum HOM05D004612 ORTHO05D004940 1.6e-07 61.2 51 62.7
Hund16942 Selenicereus undatus HOM05D004612 ORTHO05D004940 2.7e-07 60.5 57 56.1
AUR62023440 Chenopodium quinoa HOM05D004612 ORTHO05D004940 7.9e-07 58.9 57 56.1
AUR62033327 Chenopodium quinoa HOM05D004612 ORTHO05D004940 7.9e-07 58.9 57 56.1
Psat4g153800 Pisum sativum HOM05D004612 ORTHO05D004940 1.3e-06 58.2 57 56.1
EL10Ac1g00526 Beta vulgaris HOM05D004612 ORTHO05D004940 1.8e-06 57.8 54 55.6
DCAR_008600 Daucus carota HOM05D004612 ORTHO05D004940 1.8e-06 57.8 57 54.4
CDE05G3327 Ceratophyllum demersum HOM05D004612 ORTHO05D004940 2.3e-06 57.4 43 67.4
AUR62004317 Chenopodium quinoa HOM05D004612 ORTHO05D004940 2.3e-06 57.4 54 55.6
AUR62033332 Chenopodium quinoa HOM05D004612 ORTHO05D004940 3.0e-06 57.0 57 54.4
RcHm_v2.0_Chr1g0353681 Rosa chinensis HOM05D004612 ORTHO05D004940 3.0e-06 57.0 55 60.0


User provided reference genes

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