Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 2.7e-147 525.4 282 100.0
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 9.4e-84 314.3 280 64.3
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 7.7e-78 294.7 255 65.9
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 2.9e-72 276.2 265 60.4
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 1.1e-71 274.2 261 59.4
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 3.5e-70 269.2 259 59.8
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 5.9e-70 268.5 263 55.1
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 1.7e-69 266.9 263 58.6
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 1.5e-68 263.8 254 59.1
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 2.8e-67 259.6 259 57.5
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 3.6e-67 259.2 265 55.5
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 3.6e-67 259.2 265 56.6
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 4.7e-67 258.8 265 55.5
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 4.7e-67 258.8 251 59.4
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.4e-66 257.3 265 55.1
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 8.9e-66 254.6 257 54.1
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 2.0e-65 253.4 272 51.8
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 1.7e-64 250.4 255 56.9
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 1.4e-63 247.3 265 52.8
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 1.4e-63 247.3 255 56.5
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 3.2e-63 246.1 266 52.6
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 4.1e-63 245.7 261 52.1
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 7.0e-63 245.0 258 55.0
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 1.2e-62 244.2 280 50.4
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 1.6e-62 243.8 248 57.3
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 1.6e-62 243.8 266 53.8
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 2.0e-62 243.4 253 55.3
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 2.0e-62 243.4 278 51.4
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 2.7e-62 243.0 266 51.5
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 3.5e-62 242.7 261 51.3
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 6.0e-62 241.9 266 53.4
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 6.0e-62 241.9 266 53.4
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 6.0e-62 241.9 219 62.1
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 7.8e-62 241.5 266 51.9
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 1.0e-61 241.1 266 53.0
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 1.3e-61 240.7 220 61.4
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 1.3e-61 240.7 252 54.4
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 2.3e-61 240.0 261 51.0
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 2.3e-61 240.0 278 51.8
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 3.0e-61 239.6 266 52.6
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 3.9e-61 239.2 271 52.0
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 5.0e-61 238.8 258 53.5
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 8.6e-61 238.0 266 52.6
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 1.1e-60 237.7 221 57.5
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.9e-60 236.9 264 51.5
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 2.5e-60 236.5 266 51.9
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 3.3e-60 236.1 279 51.6
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 7.3e-60 235.0 293 48.8
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 9.5e-60 234.6 267 50.6
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 1.2e-59 234.2 306 47.1
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 3.6e-59 232.6 266 51.9
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 6.2e-59 231.9 263 50.2
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 1.8e-58 230.3 255 49.0
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.5e-57 227.3 250 51.2
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.5e-57 227.3 251 50.2
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 2.0e-57 226.9 249 54.2
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 9.8e-57 224.6 268 51.1
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 1.3e-56 224.2 266 50.4
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 4.9e-56 222.2 224 56.2
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 8.3e-56 221.5 252 50.0
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 8.3e-56 221.5 250 50.8
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 1.4e-55 220.7 258 49.6
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 1.0e-53 214.5 244 51.6
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 6.6e-53 211.8 209 58.4
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 1.1e-52 211.1 227 54.2
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 2.5e-52 209.9 232 55.2
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 2.3e-50 203.4 239 53.1
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 5.8e-49 198.7 225 48.9
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 5.8e-49 198.7 220 56.4
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 1.7e-48 197.2 183 61.7
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 6.4e-48 195.3 205 57.1
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 4.1e-47 192.6 187 60.4
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 2.1e-46 190.3 274 41.2
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 2.3e-45 186.8 227 44.9
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 3.0e-45 186.4 273 40.3
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 5.6e-44 182.2 188 57.4
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 9.6e-44 181.4 188 53.7
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.8e-43 179.9 224 49.6
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 4.7e-43 179.1 227 49.3
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.2e-43 178.7 224 48.7
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 6.2e-43 178.7 289 44.6
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 4.2e-39 166.0 106 84.0
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 3.1e-34 149.8 227 42.3
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 9.0e-34 148.3 269 41.6
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 9.9e-33 144.8 255 41.6
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 4.9e-32 142.5 239 39.7
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 6.4e-32 142.1 163 52.1
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 3.0e-29 133.3 233 40.8
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 1.6e-27 127.5 263 34.6
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 3.1e-26 123.2 92 71.7
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 6.7e-21 105.5 136 43.4
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 4.8e-19 99.4 127 42.5
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 1.0e-16 91.7 131 41.2
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 1.4e-15 87.8 74 59.5
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 2.1e-11 73.9 89 50.6


User provided reference genes

Program Settings