Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014631.1 Olea europaea HOM05D007414 ORTHO05D009482 1.2e-22 109.0 56 100.0
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 4.0e-10 67.4 49 73.5
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 6.8e-10 66.6 56 69.6
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 2.0e-09 65.1 50 66.0
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 2.6e-09 64.7 57 66.7
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 3.4e-09 64.3 53 67.9
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 3.4e-09 64.3 53 66.0
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 5.8e-09 63.5 57 63.2
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 7.5e-09 63.2 39 76.9
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 1.3e-08 62.4 51 64.7
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 2.2e-08 61.6 49 65.3
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 2.2e-08 61.6 57 63.2
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 2.2e-08 61.6 51 64.7
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 2.9e-08 61.2 53 67.9
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 3.7e-08 60.8 52 65.4
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 3.7e-08 60.8 39 74.4
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 4.9e-08 60.5 53 64.2
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 4.9e-08 60.5 58 60.3
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 4.9e-08 60.5 56 58.9
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 4.9e-08 60.5 56 60.7
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 6.4e-08 60.1 57 61.4
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 6.4e-08 60.1 57 61.4
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 6.4e-08 60.1 57 61.4
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 6.4e-08 60.1 57 61.4
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 6.4e-08 60.1 58 58.6
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 6.4e-08 60.1 53 64.2
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 6.4e-08 60.1 53 62.3
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 6.4e-08 60.1 39 71.8
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 6.4e-08 60.1 39 71.8
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 8.3e-08 59.7 58 63.8
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 8.3e-08 59.7 57 66.7
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 1.1e-07 59.3 57 61.4
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 1.1e-07 59.3 46 69.6
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 1.1e-07 59.3 54 64.8
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 1.9e-07 58.5 39 71.8
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 1.9e-07 58.5 57 61.4
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 2.4e-07 58.2 58 60.3
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 2.4e-07 58.2 57 59.6
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 3.2e-07 57.8 39 69.2
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 4.1e-07 57.4 50 62.0
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 4.1e-07 57.4 50 62.0
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 1.6e-06 55.5 49 59.2
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 1.6e-06 55.5 58 55.2
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 2.7e-06 54.7 47 59.6
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 2.7e-06 54.7 53 64.2
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 3.5e-06 54.3 54 53.7
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 4.6e-06 53.9 47 59.6
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 7.8e-06 53.1 57 56.1
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 7.8e-06 53.1 57 56.1
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 7.8e-06 53.1 48 64.6


User provided reference genes

Program Settings