Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 1.3e-51 206.1 103 100.0
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 6.6e-43 177.2 103 86.4
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 1.9e-34 149.1 103 72.8
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 4.0e-32 141.4 104 70.2
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 4.0e-32 141.4 104 70.2
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 5.2e-32 141.0 104 69.2
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 4.4e-31 137.9 104 68.3
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 2.2e-30 135.6 106 66.0
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 4.9e-30 134.4 107 69.2
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 8.3e-30 133.7 107 67.3
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 1.1e-29 133.3 111 60.4
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 3.2e-29 131.7 104 63.5
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 4.1e-29 131.3 103 66.0
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 4.1e-29 131.3 107 61.7
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 4.1e-29 131.3 103 64.1
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 7.1e-29 130.6 103 64.1
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 9.2e-29 130.2 100 70.0
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.2e-28 129.8 103 65.0
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 1.2e-28 129.8 106 65.1
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 1.6e-28 129.4 103 62.1
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 2.1e-28 129.0 106 64.2
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 2.1e-28 129.0 106 64.2
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 2.7e-28 128.6 103 63.1
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 3.5e-28 128.3 104 64.4
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 3.5e-28 128.3 104 63.5
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 4.6e-28 127.9 109 64.2
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 4.6e-28 127.9 109 64.2
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 4.6e-28 127.9 109 64.2
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 4.6e-28 127.9 103 63.1
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 6.0e-28 127.5 103 62.1
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 7.8e-28 127.1 103 63.1
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 7.8e-28 127.1 103 62.1
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 1.7e-27 125.9 103 63.1
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 2.3e-27 125.6 103 62.1
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.3e-27 125.6 103 63.1
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 2.3e-27 125.6 103 63.1
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.0e-27 125.2 103 67.0
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 3.0e-27 125.2 105 63.8
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.9e-27 124.8 104 65.4
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 5.1e-27 124.4 103 63.1
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 6.6e-27 124.0 106 63.2
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 8.6e-27 123.6 83 74.7
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 8.6e-27 123.6 103 62.1
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 8.6e-27 123.6 103 63.1
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 1.1e-26 123.2 105 61.0
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 4.3e-26 121.3 103 65.0
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 4.3e-26 121.3 103 59.2
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 4.3e-26 121.3 103 62.1
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 5.6e-26 120.9 103 62.1
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 5.6e-26 120.9 100 66.0
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 7.3e-26 120.6 85 71.8
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 7.3e-26 120.6 105 58.1
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 7.3e-26 120.6 103 61.2
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 9.5e-26 120.2 103 62.1
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 9.5e-26 120.2 103 62.1
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 9.5e-26 120.2 103 61.2
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 1.2e-25 119.8 103 60.2
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 1.2e-25 119.8 103 59.2
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 1.2e-25 119.8 103 64.1
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.6e-25 119.4 103 59.2
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 1.6e-25 119.4 104 61.5
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 2.1e-25 119.0 103 59.2
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 3.6e-25 118.2 103 59.2
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 3.6e-25 118.2 103 59.2
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 3.6e-25 118.2 103 57.3
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 3.6e-25 118.2 104 58.7
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 3.6e-25 118.2 103 58.3
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 4.7e-25 117.9 103 56.3
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 4.7e-25 117.9 103 58.3
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 4.7e-25 117.9 103 60.2
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 8.1e-25 117.1 105 59.0
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 8.1e-25 117.1 104 60.6
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 8.1e-25 117.1 104 60.6
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 8.1e-25 117.1 103 58.3
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 8.1e-25 117.1 104 60.6
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 1.1e-24 116.7 103 58.3
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 1.1e-24 116.7 103 58.3
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 1.1e-24 116.7 109 56.0
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 1.1e-24 116.7 104 59.6
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 2.4e-24 115.5 99 59.6
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 2.4e-24 115.5 105 59.0
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 3.1e-24 115.2 103 61.2
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 3.1e-24 115.2 103 57.3
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 4.0e-24 114.8 89 62.9
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 5.2e-24 114.4 103 60.2
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 6.8e-24 114.0 103 56.3
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 8.9e-24 113.6 109 57.8
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.2e-23 113.2 105 60.0
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 1.2e-23 113.2 67 83.6
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 1.2e-23 113.2 104 59.6
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 1.5e-23 112.8 100 56.0
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 1.5e-23 112.8 103 56.3
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 1.5e-23 112.8 106 56.6
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 2.6e-23 112.1 67 82.1
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 3.4e-23 111.7 107 59.8
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 3.4e-23 111.7 107 59.8
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 3.4e-23 111.7 104 55.8
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 5.8e-23 110.9 109 54.1
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 5.8e-23 110.9 109 54.1
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 1.3e-22 109.8 104 54.8
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 2.2e-22 109.0 105 58.1
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 3.8e-22 108.2 109 57.8
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 4.9e-22 107.8 103 54.4
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 6.4e-22 107.5 110 53.6
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 1.9e-21 105.9 103 56.3
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 3.2e-21 105.1 103 50.5
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 5.4e-21 104.4 70 72.9
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 5.4e-21 104.4 105 53.3
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 7.1e-21 104.0 106 51.9
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 9.2e-21 103.6 84 59.5
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 3.5e-20 101.7 103 53.4
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 3.5e-20 101.7 103 54.4
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 3.0e-19 98.6 64 73.4
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 3.9e-19 98.2 108 50.0
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 1.9e-18 95.9 63 71.4
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 4.3e-18 94.7 110 50.0
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 4.8e-17 91.3 57 64.9
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.2e-15 86.7 92 46.7
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 4.4e-15 84.7 58 67.2
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 9.9e-15 83.6 57 64.9
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 8.4e-14 80.5 55 69.1
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 2.4e-13 79.0 111 43.2
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 5.4e-13 77.8 76 57.9
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 2.1e-12 75.9 64 54.7
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 6.0e-12 74.3 99 46.5
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 5.1e-11 71.2 32 93.8
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 7.3e-10 67.4 133 36.1
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 3.1e-08 62.0 71 46.5


User provided reference genes

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