Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014494.1 Olea europaea HOM05D004716 ORTHO05D005646 5.4e-62 241.1 149 100.0
Oeu046025.1 Olea europaea HOM05D004716 ORTHO05D005646 4.3e-35 151.8 148 62.8
Oeu011938.1 Olea europaea HOM05D004716 ORTHO05D005646 4.0e-33 145.2 148 60.8
SalBow7G0781 Salvia bowleyana HOM05D004716 ORTHO05D005646 5.6e-27 124.8 148 52.0
Cc10_g14730 Coffea canephora HOM05D004716 ORTHO05D005646 2.1e-21 106.3 159 45.3
Nn5g28715 Nelumbo nucifera HOM05D004716 ORTHO05D005646 1.3e-20 103.6 159 49.7
Dinv41092 Davidia involucrata HOM05D004716 ORTHO05D005646 3.3e-19 99.0 154 46.8
MSTRG.22371 Avicennia marina HOM05D004716 ORTHO05D005646 7.3e-19 97.8 173 41.6
SGA_v2.0_scaffold25G11175 Striga asiatica HOM05D004716 ORTHO05D005646 9.6e-19 97.4 175 42.3
Actinidia17798 Actinidia chinensis HOM05D004716 ORTHO05D005646 1.6e-18 96.7 148 43.2
ClCG09G009620 Citrullus lanatus HOM05D004716 ORTHO05D005646 1.6e-18 96.7 150 46.0
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla HOM05D004716 ORTHO05D005646 1.6e-18 96.7 171 44.4
TWI34G0952 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 2.1e-18 96.3 148 43.2
MELO3C023718.2 Cucumis melo HOM05D004716 ORTHO05D005646 6.2e-18 94.7 149 47.0
CsaV3_7G025180 Cucumis sativus L. HOM05D004716 ORTHO05D005646 1.4e-17 93.6 149 46.3
GSVIVG01034512001 Vitis vinifera HOM05D004716 ORTHO05D005646 1.8e-17 93.2 149 42.3
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea HOM05D004716 ORTHO05D005646 6.9e-17 91.3 155 43.2
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea HOM05D004716 ORTHO05D005646 6.9e-17 91.3 155 43.2
Thhalv10011324m.g Eutrema salsugineum HOM05D004716 ORTHO05D005646 9.0e-17 90.9 151 41.7
Aqoxy5G02106 Aquilegia oxysepala HOM05D004716 ORTHO05D005646 1.2e-16 90.5 156 41.7
Carub.0001s3471 Capsella rubella HOM05D004716 ORTHO05D005646 1.2e-16 90.5 154 42.9
AL1G51810 Arabidopsis lyrata HOM05D004716 ORTHO05D005646 1.5e-16 90.1 149 42.3
Cpa.g.sc21.191 Carica papaya HOM05D004716 ORTHO05D005646 1.5e-16 90.1 154 44.8
CiPaw.15G016900 Carya illinoinensis HOM05D004716 ORTHO05D005646 1.5e-16 90.1 151 43.0
Prupe.8G028200 Prunus persica HOM05D004716 ORTHO05D005646 2.0e-16 89.7 148 41.2
Nitab4.5_0000032g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 2.6e-16 89.4 159 44.7
Rhsim06G0090400 Rhododendron simsii HOM05D004716 ORTHO05D005646 2.6e-16 89.4 148 39.9
Sp1g32700 Schrenkiella parvula HOM05D004716 ORTHO05D005646 2.6e-16 89.4 151 43.0
Nitab4.5_0008759g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 3.4e-16 89.0 159 44.7
CiPaw.16G013500 Carya illinoinensis HOM05D004716 ORTHO05D005646 4.5e-16 88.6 149 43.0
HanXRQChr10g0277851 Helianthus annuus HOM05D004716 ORTHO05D005646 4.5e-16 88.6 108 55.6
Dinv25852 Davidia involucrata HOM05D004716 ORTHO05D005646 5.8e-16 88.2 151 42.4
SalBow6G6163 Salvia bowleyana HOM05D004716 ORTHO05D005646 5.8e-16 88.2 175 41.1
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 9.9e-16 87.4 150 43.3
BcaB07g33979 Brassica carinata HOM05D004716 ORTHO05D005646 1.3e-15 87.0 149 42.3
CANSAT25G0539 Cannabis sativa HOM05D004716 ORTHO05D005646 1.7e-15 86.7 154 45.5
BcaC08g42816 Brassica carinata HOM05D004716 ORTHO05D005646 2.9e-15 85.9 149 39.6
C06p00280 Brassica napus HOM05D004716 ORTHO05D005646 2.9e-15 85.9 149 39.6
HanXRQChr10g0279061 Helianthus annuus HOM05D004716 ORTHO05D005646 2.9e-15 85.9 150 44.0
MBI09_g32373_MAGBIO Magnolia biondii HOM05D004716 ORTHO05D005646 2.9e-15 85.9 114 48.2
MD05G1023700 Malus domestica HOM05D004716 ORTHO05D005646 2.9e-15 85.9 150 43.3
PSO210G2251 Papaver somniferum HOM05D004716 ORTHO05D005646 2.9e-15 85.9 166 42.8
Aa31LG6G9740 Aethionema arabicum HOM05D004716 ORTHO05D005646 8.4e-15 84.3 154 42.2
AT1G43690 Arabidopsis thaliana HOM05D004716 ORTHO05D005646 8.4e-15 84.3 151 43.0
TAR381G1500 Trochodendron aralioides HOM05D004716 ORTHO05D005646 8.4e-15 84.3 165 41.8
A10p07790 Brassica napus HOM05D004716 ORTHO05D005646 2.4e-14 82.8 149 38.9
BraSC36t46025Z Brassica rapa HOM05D004716 ORTHO05D005646 2.4e-14 82.8 149 38.9
EL10Ac1g01533 Beta vulgaris HOM05D004716 ORTHO05D005646 3.2e-14 82.4 153 40.5
Sed0005850 Sechium edule HOM05D004716 ORTHO05D005646 3.2e-14 82.4 151 42.4
FAN15G2444 Fragaria x ananassa HOM05D004716 ORTHO05D005646 4.2e-14 82.0 148 41.9
SGA_v2.0_scaffold24G10374 Striga asiatica HOM05D004716 ORTHO05D005646 4.2e-14 82.0 151 41.7
Duzib041G0148 Durio zibethinus HOM05D004716 ORTHO05D005646 5.4e-14 81.6 149 43.0
HPP92_019355 Vanilla planifolia HOM05D004716 ORTHO05D005646 5.4e-14 81.6 120 48.3
Haze_17746 Corylus avellana HOM05D004716 ORTHO05D005646 9.3e-14 80.9 148 40.5
Lsat_1_v5_gn_6_99641 Lactuca sativa HOM05D004716 ORTHO05D005646 1.2e-13 80.5 150 42.7
unitig_62.g23528 Utricularia gibba HOM05D004716 ORTHO05D005646 1.2e-13 80.5 126 43.7
FAN27G2333 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.6e-13 80.1 148 43.2
Gohir.A05G270100 Gossypium hirsutum HOM05D004716 ORTHO05D005646 2.7e-13 79.3 149 42.3
TWI60G0041 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 3.5e-13 79.0 149 40.3
ATR0772G018 Amborella trichopoda HOM05D004716 ORTHO05D005646 4.6e-13 78.6 119 42.9
Migut.N03224 Erythranthe guttata HOM05D004716 ORTHO05D005646 4.6e-13 78.6 173 39.3
Gohir.D05G272200 Gossypium hirsutum HOM05D004716 ORTHO05D005646 4.6e-13 78.6 149 43.0
Gorai.009G285100 Gossypium raimondii HOM05D004716 ORTHO05D005646 4.6e-13 78.6 149 43.0
Manes.18G091200 Manihot esculenta HOM05D004716 ORTHO05D005646 6.0e-13 78.2 148 42.6
Phvul.007G079400 Phaseolus vulgaris HOM05D004716 ORTHO05D005646 1.0e-12 77.4 149 40.9
Cfa018329 Carpinus fangiana HOM05D004716 ORTHO05D005646 1.8e-12 76.6 148 39.2
Ca_19935_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 1.8e-12 76.6 151 43.0
Sed0016522 Sechium edule HOM05D004716 ORTHO05D005646 1.8e-12 76.6 149 41.6
TPR.G30003 Trifolium pratense HOM05D004716 ORTHO05D005646 2.3e-12 76.3 151 42.4
Lj5g0004042 Lotus japonicus HOM05D004716 ORTHO05D005646 3.0e-12 75.9 152 43.4
Medtr1g098940 Medicago truncatula HOM05D004716 ORTHO05D005646 3.9e-12 75.5 154 42.9
TAR625G0458 Trochodendron aralioides HOM05D004716 ORTHO05D005646 3.9e-12 75.5 162 38.9
Duzib116G0661 Durio zibethinus HOM05D004716 ORTHO05D005646 6.7e-12 74.7 150 41.3
FvH4_2g13910 Fragaria vesca HOM05D004716 ORTHO05D005646 8.7e-12 74.3 148 41.9
FAN20G2258 Fragaria x ananassa HOM05D004716 ORTHO05D005646 8.7e-12 74.3 148 42.6
QL02p024060 Quercus lobata HOM05D004716 ORTHO05D005646 8.7e-12 74.3 99 50.5
Sabra05G0146100 Salix brachista HOM05D004716 ORTHO05D005646 8.7e-12 74.3 148 39.9
FAN24G2048 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.1e-11 73.9 148 41.9
Potri.002G069100 Populus trichocarpa HOM05D004716 ORTHO05D005646 1.1e-11 73.9 159 39.0
Potri.005G191300 Populus trichocarpa HOM05D004716 ORTHO05D005646 1.5e-11 73.6 148 40.5
RcHm_v2.0_Chr6g0275661 Rosa chinensis HOM05D004716 ORTHO05D005646 1.5e-11 73.6 148 39.9
DCAR_001131 Daucus carota HOM05D004716 ORTHO05D005646 1.9e-11 73.2 150 40.7
Glyma.10G225500 Glycine max HOM05D004716 ORTHO05D005646 1.9e-11 73.2 149 40.3
MD10G1024300 Malus domestica HOM05D004716 ORTHO05D005646 1.9e-11 73.2 152 40.1
THA.LOC104809692 Tarenaya hassleriana HOM05D004716 ORTHO05D005646 2.5e-11 72.8 121 43.8
Ca_25987_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 4.3e-11 72.0 155 38.1
Ah.05g167860 Amaranthus hybridus HOM05D004716 ORTHO05D005646 1.3e-10 70.5 151 36.4
CARHR035580 Cardamine hirsuta HOM05D004716 ORTHO05D005646 1.6e-10 70.1 150 36.7
AUR62013572 Chenopodium quinoa HOM05D004716 ORTHO05D005646 2.1e-10 69.7 163 36.2
Atru.chr13.2155 Acer truncatum HOM05D004716 ORTHO05D005646 3.7e-10 68.9 159 40.3
SEGI_31186 Sequoiadendron giganteum HOM05D004716 ORTHO05D005646 6.2e-10 68.2 152 33.6
Migut.C01013 Erythranthe guttata HOM05D004716 ORTHO05D005646 1.1e-09 67.4 76 52.6
ECA246G4589 Erigeron canadensis HOM05D004716 ORTHO05D005646 1.8e-09 66.6 111 46.8
Glyma.20G166300 Glycine max HOM05D004716 ORTHO05D005646 2.4e-09 66.2 149 38.3
Sopen04g027280 Solanum pennellii HOM05D004716 ORTHO05D005646 2.4e-09 66.2 172 35.5
Lalb_Chr01g0009631 Lupinus albus HOM05D004716 ORTHO05D005646 5.3e-09 65.1 157 37.6
Actinidia10651 Actinidia chinensis HOM05D004716 ORTHO05D005646 6.9e-09 64.7 148 35.1
Ciclev10000573m.g Citrus clementina HOM05D004716 ORTHO05D005646 3.4e-08 62.4 165 37.6
Peaxi162Scf00765g00315 Petunia axillaris HOM05D004716 ORTHO05D005646 4.5e-08 62.0 158 34.2
SMO331G0079 Selaginella moellendorffii HOM05D004716 ORTHO05D005646 5.8e-08 61.6 113 38.1
CDE06G2375 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 7.6e-08 61.2 149 35.6
CDE08G0143 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 7.6e-08 61.2 149 34.9
SHI09390 Sapria himalayana HOM05D004716 ORTHO05D005646 3.8e-07 58.9 149 35.6
VMungo0464G1352 Vigna mungo HOM05D004716 ORTHO05D005646 3.8e-07 58.9 114 42.1
Gohir.A05G242900 Gossypium hirsutum HOM05D004716 ORTHO05D005646 6.4e-07 58.2 42 64.3
Gorai.009G253500 Gossypium raimondii HOM05D004716 ORTHO05D005646 6.4e-07 58.2 42 64.3
Lj4C695G10 Lonicera japonica HOM05D004716 ORTHO05D005646 8.4e-07 57.8 48 58.3
PGR044G2101 Punica granatum HOM05D004716 ORTHO05D005646 1.4e-06 57.0 168 33.9
CSS0021208 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 2.4e-06 56.2 75 49.3
PGSC0003DMG401024092 Solanum tuberosum HOM05D004716 ORTHO05D005646 3.2e-06 55.8 35 71.4
COL.COLO4_37837 Corchorus olitorius HOM05D004716 ORTHO05D005646 4.2e-06 55.5 77 46.8
Duzib093G0980 Durio zibethinus HOM05D004716 ORTHO05D005646 4.2e-06 55.5 42 61.9
Eucgr.F04241 Eucalyptus grandis HOM05D004716 ORTHO05D005646 7.1e-06 54.7 39 61.5
Thecc.08G149900 Theobroma cacao HOM05D004716 ORTHO05D005646 7.1e-06 54.7 78 44.9
Lalb_Chr06g0161551 Lupinus albus HOM05D004716 ORTHO05D005646 9.3e-06 54.3 33 66.7


User provided reference genes

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