Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014453.1 Olea europaea HOM05D005160 ORTHO05D006127 0.0e+00 1103.2 622 100.0
MSTRG.16896 Avicennia marina HOM05D005160 ORTHO05D006127 2.7e-232 808.9 631 70.0
Migut.B00095 Erythranthe guttata HOM05D005160 ORTHO05D006127 8.7e-223 777.3 626 68.7
SalBow1G7891 Salvia bowleyana HOM05D005160 ORTHO05D006127 3.9e-215 751.9 630 66.3
PGSC0003DMG402006199 Solanum tuberosum HOM05D005160 ORTHO05D006127 1.6e-213 746.5 626 65.3
Sopen01g053440 Solanum pennellii HOM05D005160 ORTHO05D006127 8.2e-213 744.2 626 65.2
Solyc01g111370.3 Solanum lycopersicum HOM05D005160 ORTHO05D006127 3.1e-212 742.3 626 65.0
Cc02_g16320 Coffea canephora HOM05D005160 ORTHO05D006127 9.0e-212 740.7 631 63.9
Nitab4.5_0001891g0030 Nicotiana tabacum HOM05D005160 ORTHO05D006127 9.0e-212 740.7 623 65.2
Nitab4.5_0005837g0020 Nicotiana tabacum HOM05D005160 ORTHO05D006127 3.4e-211 738.8 623 64.5
SGA_v2.0_scaffold32G13272 Striga asiatica HOM05D005160 ORTHO05D006127 4.5e-211 738.4 626 65.2
Peaxi162Scf00362g00839 Petunia axillaris HOM05D005160 ORTHO05D006127 5.5e-209 731.5 627 64.6
CAN.G588.54 Capsicum annuum HOM05D005160 ORTHO05D006127 9.3e-209 730.7 621 65.2
SGA_v2.0_scaffold58G20392 Striga asiatica HOM05D005160 ORTHO05D006127 1.0e-202 710.7 626 62.9
Hma1.2p1_0163F.1_g072320 Hydrangea macrophylla HOM05D005160 ORTHO05D006127 1.6e-200 703.4 626 63.9
CSS0048155 Camellia sinensis var. sinensis HOM05D005160 ORTHO05D006127 1.6e-197 693.3 627 61.4
Haze_02160 Corylus avellana HOM05D005160 ORTHO05D006127 9.1e-196 687.6 608 62.5
Potri.009G132900 Populus trichocarpa HOM05D005160 ORTHO05D006127 3.4e-195 685.6 607 62.6
Dinv41951 Davidia involucrata HOM05D005160 ORTHO05D006127 1.4e-193 680.2 594 65.0
Rhsim11G0191300 Rhododendron simsii HOM05D005160 ORTHO05D006127 1.2e-192 677.2 620 61.1
Potri.004G173600 Populus trichocarpa HOM05D005160 ORTHO05D006127 1.6e-192 676.8 620 60.5
Ciclev10028126m.g Citrus clementina HOM05D005160 ORTHO05D006127 6.1e-192 674.9 607 62.4
Cfa005223 Carpinus fangiana HOM05D005160 ORTHO05D006127 5.1e-191 671.8 607 61.3
Hund06424 Selenicereus undatus HOM05D005160 ORTHO05D006127 4.4e-190 668.7 627 59.8
Thecc.02G062800 Theobroma cacao HOM05D005160 ORTHO05D006127 1.3e-189 667.2 615 60.7
AUR62013051 Chenopodium quinoa HOM05D005160 ORTHO05D006127 4.1e-188 662.1 613 59.5
EL10Ac9g21400 Beta vulgaris HOM05D005160 ORTHO05D006127 5.3e-188 661.8 631 58.0
Thecc.02G062500 Theobroma cacao HOM05D005160 ORTHO05D006127 5.3e-188 661.8 615 60.5
CiPaw.05G080400 Carya illinoinensis HOM05D005160 ORTHO05D006127 6.9e-188 661.4 617 60.9
AUR62010059 Chenopodium quinoa HOM05D005160 ORTHO05D006127 2.0e-187 659.8 612 59.5
THA.LOC104824770 Tarenaya hassleriana HOM05D005160 ORTHO05D006127 1.0e-186 657.5 619 59.5
Phvul.011G034500 Phaseolus vulgaris HOM05D005160 ORTHO05D006127 1.7e-186 656.8 608 59.5
TAR381G1224 Trochodendron aralioides HOM05D005160 ORTHO05D006127 3.8e-186 655.6 625 58.7
Oeu006646.1 Olea europaea HOM05D005160 ORTHO05D006127 6.5e-186 654.8 466 79.8
vmacro02269 Vaccinium macrocarpon HOM05D005160 ORTHO05D006127 1.4e-185 653.7 651 57.3
Lj3g0012456 Lotus japonicus HOM05D005160 ORTHO05D006127 3.2e-185 652.5 612 59.6
Sabra04G0115600 Salix brachista HOM05D005160 ORTHO05D006127 3.2e-185 652.5 596 60.7
MELO3C020808.2 Cucumis melo HOM05D005160 ORTHO05D006127 5.5e-185 651.7 617 58.7
Gohir.D01G157700 Gossypium hirsutum HOM05D005160 ORTHO05D006127 7.2e-185 651.4 618 58.9
Medtr4g073620 Medicago truncatula HOM05D005160 ORTHO05D006127 9.4e-185 651.0 607 58.3
Sabra09G0103200 Salix brachista HOM05D005160 ORTHO05D006127 2.1e-184 649.8 609 60.4
Duzib132G0556 Durio zibethinus HOM05D005160 ORTHO05D006127 2.7e-184 649.4 623 59.2
VMungo1127G1693 Vigna mungo HOM05D005160 ORTHO05D006127 2.7e-184 649.4 607 59.1
GSVIVG01024045001 Vitis vinifera HOM05D005160 ORTHO05D006127 4.7e-184 648.7 619 58.8
Sc08g0003030 Simmondsia chinensis HOM05D005160 ORTHO05D006127 6.1e-184 648.3 633 58.8
CsaV3_2G015970 Cucumis sativus L. HOM05D005160 ORTHO05D006127 1.0e-183 647.5 617 58.5
Manes.04G073300 Manihot esculenta HOM05D005160 ORTHO05D006127 1.4e-183 647.1 626 58.3
Lalb_Chr03g0025091 Lupinus albus HOM05D005160 ORTHO05D006127 1.1e-182 644.0 607 59.3
ClCG02G011810 Citrullus lanatus HOM05D005160 ORTHO05D006127 1.5e-182 643.7 618 58.1
QL11p049938 Quercus lobata HOM05D005160 ORTHO05D006127 1.5e-182 643.7 629 59.3
Gorai.002G195800 Gossypium raimondii HOM05D005160 ORTHO05D006127 2.0e-182 643.3 618 58.6
Gohir.A01G166700 Gossypium hirsutum HOM05D005160 ORTHO05D006127 5.7e-182 641.7 615 58.5
Psat7g175760 Pisum sativum HOM05D005160 ORTHO05D006127 7.4e-182 641.3 611 58.1
AT4G38640 Arabidopsis thaliana HOM05D005160 ORTHO05D006127 9.7e-182 641.0 605 59.0
Sed0006607 Sechium edule HOM05D005160 ORTHO05D006127 9.7e-182 641.0 611 59.7
THA.LOC104804092 Tarenaya hassleriana HOM05D005160 ORTHO05D006127 1.3e-181 640.6 611 58.1
Sp7g37140 Schrenkiella parvula HOM05D005160 ORTHO05D006127 2.2e-181 639.8 605 59.5
Glyma.12G031600 Glycine max HOM05D005160 ORTHO05D006127 8.2e-181 637.9 607 57.7
Carub.0007s0051 Capsella rubella HOM05D005160 ORTHO05D006127 1.1e-180 637.5 602 59.1
Thhalv10024826m.g Eutrema salsugineum HOM05D005160 ORTHO05D006127 4.1e-180 635.6 603 58.7
Duzib052G1050 Durio zibethinus HOM05D005160 ORTHO05D006127 5.3e-180 635.2 610 59.3
Nn5g30735 Nelumbo nucifera HOM05D005160 ORTHO05D006127 7.0e-180 634.8 623 58.1
CARHR294360 Cardamine hirsuta HOM05D005160 ORTHO05D006127 4.5e-179 632.1 603 58.4
CiPaw.06G123200 Carya illinoinensis HOM05D005160 ORTHO05D006127 5.9e-179 631.7 594 60.3
Ca_19053_v3 Cicer arietinum L. HOM05D005160 ORTHO05D006127 5.9e-179 631.7 608 57.7
RcHm_v2.0_Chr6g0244091 Rosa chinensis HOM05D005160 ORTHO05D006127 5.9e-179 631.7 607 59.0
Glyma.11G106500 Glycine max HOM05D005160 ORTHO05D006127 1.3e-178 630.6 606 57.8
AL7G10530 Arabidopsis lyrata HOM05D005160 ORTHO05D006127 1.7e-178 630.2 602 58.1
TWI31G1222 Tripterygium wilfordii HOM05D005160 ORTHO05D006127 2.2e-178 629.8 617 58.2
MD10G1123200 Malus domestica HOM05D005160 ORTHO05D006127 8.5e-178 627.9 627 57.4
Aqoxy5G01804 Aquilegia oxysepala HOM05D005160 ORTHO05D006127 1.5e-177 627.1 627 57.7
Aa31LG6G16530 Aethionema arabicum HOM05D005160 ORTHO05D006127 3.2e-177 625.9 605 58.5
FvH4_2g01450 Fragaria vesca HOM05D005160 ORTHO05D006127 3.2e-177 625.9 609 59.3
FAN24G2272 Fragaria x ananassa HOM05D005160 ORTHO05D006127 3.2e-177 625.9 609 59.3
FAN15G3563 Fragaria x ananassa HOM05D005160 ORTHO05D006127 3.6e-176 622.5 609 59.4
FAN20G0465 Fragaria x ananassa HOM05D005160 ORTHO05D006127 6.1e-176 621.7 609 59.3
Atru.chr5.3293 Acer truncatum HOM05D005160 ORTHO05D006127 8.0e-176 621.3 608 57.6
PSO170G2472 Papaver somniferum HOM05D005160 ORTHO05D006127 1.4e-175 620.5 610 58.4
BcaB03g12216 Brassica carinata HOM05D005160 ORTHO05D006127 3.0e-175 619.4 603 57.4
FAN27G2227 Fragaria x ananassa HOM05D005160 ORTHO05D006127 4.0e-175 619.0 609 59.1
TWI75G0220 Tripterygium wilfordii HOM05D005160 ORTHO05D006127 4.4e-174 615.5 617 56.9
BcaC01g00246 Brassica carinata HOM05D005160 ORTHO05D006127 2.2e-173 613.2 602 56.8
Ah.01g022840 Amaranthus hybridus HOM05D005160 ORTHO05D006127 2.8e-173 612.8 624 55.6
C03p77200 Brassica napus HOM05D005160 ORTHO05D006127 2.8e-173 612.8 602 57.1
PSO700G0063 Papaver somniferum HOM05D005160 ORTHO05D006127 4.8e-173 612.1 612 57.7
BolC3t19975H Brassica oleracea HOM05D005160 ORTHO05D006127 8.2e-173 611.3 602 56.8
A08p24110 Brassica napus HOM05D005160 ORTHO05D006127 1.6e-171 607.1 603 56.6
DCAR_003159 Daucus carota HOM05D005160 ORTHO05D006127 1.6e-171 607.1 610 56.6
Prupe.8G163700 Prunus persica HOM05D005160 ORTHO05D006127 2.7e-168 596.3 620 55.5
Eucgr.I01400 Eucalyptus grandis HOM05D005160 ORTHO05D006127 1.8e-167 593.6 412 74.0
Lsat_1_v5_gn_3_46280 Lactuca sativa HOM05D005160 ORTHO05D006127 4.0e-167 592.4 579 58.4
MBI09_g14140_MAGBIO Magnolia biondii HOM05D005160 ORTHO05D006127 8.8e-167 591.3 608 55.3
MD05G1119500 Malus domestica HOM05D005160 ORTHO05D006127 5.4e-164 582.0 618 56.1
HanXRQChr17g0543921 Helianthus annuus HOM05D005160 ORTHO05D006127 6.5e-162 575.1 572 56.6
TPR.G39261 Trifolium pratense HOM05D005160 ORTHO05D006127 6.4e-149 531.9 517 56.9
ATR0579G151 Amborella trichopoda HOM05D005160 ORTHO05D006127 1.1e-148 531.2 607 51.9
Actinidia20505 Actinidia chinensis HOM05D005160 ORTHO05D006127 5.4e-148 528.9 573 54.8
unitig_0.g42 Utricularia gibba HOM05D005160 ORTHO05D000138 2.9e-141 506.5 526 54.0
Actinidia00615 Actinidia chinensis HOM05D005160 ORTHO05D006127 7.3e-137 491.9 565 51.9
SEGI_02117 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 1.8e-135 487.3 586 47.6
COL.COLO4_17310 Corchorus olitorius HOM05D005160 ORTHO05D006127 2.9e-133 479.9 328 75.9
Manes.11G095300 Manihot esculenta HOM05D005160 ORTHO05D006127 2.7e-123 446.8 454 56.4
ECA246G0167 Erigeron canadensis HOM05D005160 ORTHO05D006127 3.5e-107 393.3 276 74.3
CDE02G2386 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 4.6e-107 392.9 312 67.0
Lj5A181T55 Lonicera japonica HOM05D005160 ORTHO05D006127 6.7e-106 389.0 417 54.2
CDE04G1868 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 6.2e-104 382.5 297 69.7
CANSAT54G2532 Cannabis sativa HOM05D005160 ORTHO05D006127 8.4e-101 372.1 420 51.9
Cpa.g.sc37.161 Carica papaya HOM05D005160 ORTHO05D006127 7.9e-99 365.5 411 50.4
SMO012G0038 Selaginella moellendorffii HOM05D005160 ORTHO05D006127 2.3e-98 364.0 564 39.7
AL7G44960 Arabidopsis lyrata HOM05D005160 ORTHO05D006127 1.9e-97 360.9 397 53.4
Manes.05G150701 Manihot esculenta HOM05D005160 ORTHO05D006127 4.8e-96 356.3 366 54.6
Manes.07G080900 Manihot esculenta HOM05D005160 ORTHO05D006127 7.6e-94 349.0 366 54.6
BraA08t34366Z Brassica rapa HOM05D005160 ORTHO05D006127 1.0e-93 348.6 400 50.5
arahy.Tifrunner.gnm1.ann1.JXV2U6 Arachis hypogaea HOM05D005160 ORTHO05D006127 1.3e-90 338.2 393 49.1
arahy.Tifrunner.gnm1.ann1.IE9R9X Arachis hypogaea HOM05D005160 ORTHO05D006127 5.1e-90 336.3 393 48.9
Pp3c15_6240 Physcomitrium patens HOM05D005160 ORTHO05D006127 1.4e-84 318.2 568 36.3
AagrBONN_evm.TU.Sc2ySwM_344.1211 Anthoceros agrestis HOM05D005160 ORTHO05D006127 4.6e-83 313.2 616 35.2
Lalb_Chr01g0001791 Lupinus albus HOM05D005160 ORTHO05D006127 1.5e-81 308.1 258 64.7
Mapoly0029s0105 Marchantia polymorpha HOM05D005160 ORTHO05D006127 9.7e-81 305.4 558 37.3
Lj9A392T36 Lonicera japonica HOM05D005160 ORTHO05D006127 2.9e-77 293.9 221 70.6
Lj9A392T37 Lonicera japonica HOM05D005160 ORTHO05D006127 2.3e-66 257.7 180 76.1
SEGI_18476 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 2.9e-45 187.6 181 56.4
Cpa.g.sc37.160 Carica papaya HOM05D005160 ORTHO05D006127 6.6e-45 186.4 172 60.5
Pp3c24_1990 Physcomitrium patens HOM05D005160 ORTHO05D006127 8.0e-43 179.5 409 32.8
Migut.N03290 Erythranthe guttata HOM05D005160 ORTHO05D006127 7.0e-39 166.4 107 78.5
Lalb_Chr01g0001781 Lupinus albus HOM05D005160 ORTHO05D006127 7.8e-38 162.9 119 68.9
HPP92_025488 Vanilla planifolia HOM05D005160 ORTHO05D006127 5.2e-34 150.2 126 62.7
Migut.B00916 Erythranthe guttata HOM05D005160 ORTHO05D006127 2.0e-33 148.3 90 80.0
CBR_g32587 Chara braunii HOM05D005160 ORTHO05D006127 9.8e-33 146.0 435 26.0
MCO01G409 Micromonas commoda HOM05D005160 ORTHO05D006127 4.6e-30 137.1 357 27.2
Cre09.g390467 Chlamydomonas reinhardtii HOM05D005160 ORTHO05D006127 1.5e-25 122.1 376 28.2
TPR.G40783 Trifolium pratense HOM05D005160 ORTHO05D006127 2.6e-25 121.3 73 76.7
MCO08G169 Micromonas commoda HOM05D005160 ORTHO05D006127 3.7e-24 117.5 351 26.2
AagrBONN_evm.TU.Sc2ySwM_228.1713 Anthoceros agrestis HOM05D022446 ORTHO05D006127 2.4e-23 114.8 436 27.3
Cre14.g617800 Chlamydomonas reinhardtii HOM05D005160 ORTHO05D006127 7.1e-15 86.7 433 23.8
PRCOL_00003313 Prasinoderma coloniale HOM05D005160 ORTHO05D006127 1.2e-14 85.9 431 23.0
VMungo1080G0079 Vigna mungo HOM05D005160 ORTHO05D006127 1.2e-14 85.9 110 42.7
CDE02G2974 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 1.2e-11 75.9 195 32.8
CDE04G1166 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 1.1e-10 72.8 81 43.2
AagrBONN_evm.TU.Sc2ySwM_228.1711 Anthoceros agrestis HOM05D000883 ORTHO05D002942 2.4e-10 71.6 225 29.8
arahy.Tifrunner.gnm1.ann1.HVU79Z Arachis hypogaea HOM05D005032 ORTHO05D006268 9.2e-07 59.7 221 25.8
SGA_v2.0_scaffold5G02731 Striga asiatica HOM05D005160 ORTHO05D006127 1.6e-06 58.9 66 43.9
arahy.Tifrunner.gnm1.ann1.P6ZXGF Arachis hypogaea HOM05D005032 ORTHO05D006268 2.1e-06 58.5 221 25.3
RcHm_v2.0_Chr7g0187121 Rosa chinensis HOM05D005160 ORTHO05D006127 2.7e-06 58.2 44 63.6
SGA_v2.0_scaffold38G14986 Striga asiatica HOM05D005160 ORTHO05D006127 2.7e-06 58.2 136 35.3
VMungo1215G1708 Vigna mungo HOM05D005032 ORTHO05D006268 2.7e-06 58.2 221 24.4
CBR_g30194 Chara braunii HOM05D005032 ORTHO05D006268 3.5e-06 57.8 218 26.6
Glyma.08G315000 Glycine max HOM05D005160 ORTHO05D006127 3.5e-06 57.8 51 52.9
Phvul.003G028700 Phaseolus vulgaris HOM05D005032 ORTHO05D006268 4.6e-06 57.4 221 24.4


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