Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014412.1 Olea europaea HOM05D005551 ORTHO05D007207 6.4e-137 490.7 244 100.0
MSTRG.22962 Avicennia marina HOM05D005551 ORTHO05D007207 3.1e-14 83.2 42 85.7
Cc02_g08840 Coffea canephora HOM05D005551 ORTHO05D007207 3.1e-14 83.2 42 85.7
Actinidia29559 Actinidia chinensis HOM05D005551 ORTHO05D007207 4.0e-14 82.8 42 83.3
CiPaw.13G146700 Carya illinoinensis HOM05D005551 ORTHO05D007207 4.0e-14 82.8 42 83.3
Thecc.09G251700 Theobroma cacao HOM05D005551 ORTHO05D007207 8.9e-14 81.6 42 83.3
ECA234G2543 Erigeron canadensis HOM05D005551 ORTHO05D007207 1.2e-13 81.3 42 85.7
QL01p016086 Quercus lobata HOM05D005551 ORTHO05D007207 1.2e-13 81.3 42 83.3
TWI75G1278 Tripterygium wilfordii HOM05D005551 ORTHO05D007207 1.2e-13 81.3 42 83.3
HanXRQChr14g0433441 Helianthus annuus HOM05D005551 ORTHO05D007207 1.5e-13 80.9 42 83.3
Sabra09G0049100 Salix brachista HOM05D005551 ORTHO05D007207 2.6e-13 80.1 42 85.7
COL.COLO4_33261 Corchorus olitorius HOM05D005551 ORTHO05D007207 3.4e-13 79.7 42 81.0
arahy.Tifrunner.gnm1.ann1.HLYA7R Arachis hypogaea HOM05D005551 ORTHO05D007207 5.8e-13 79.0 42 81.0
Ciclev10015188m.g Citrus clementina HOM05D005551 ORTHO05D007207 5.8e-13 79.0 56 62.5
Medtr3g083980 Medicago truncatula HOM05D005551 ORTHO05D007207 5.8e-13 79.0 42 81.0
TPR.G8526 Trifolium pratense HOM05D005551 ORTHO05D007207 5.8e-13 79.0 42 81.0
BcaB07g34093 Brassica carinata HOM05D005551 ORTHO05D007207 7.5e-13 78.6 42 81.0
C05p06600 Brassica napus HOM05D005551 ORTHO05D007207 7.5e-13 78.6 42 81.0
BolC5t29420H Brassica oleracea HOM05D005551 ORTHO05D007207 7.5e-13 78.6 42 81.0
BraA06t23757Z Brassica rapa HOM05D005551 ORTHO05D007207 7.5e-13 78.6 42 81.0
Carub.0001s0785 Capsella rubella HOM05D005551 ORTHO05D007207 7.5e-13 78.6 42 81.0
DCAR_021423 Daucus carota HOM05D005551 ORTHO05D007207 7.5e-13 78.6 42 81.0
Sp1g07150 Schrenkiella parvula HOM05D005551 ORTHO05D007207 7.5e-13 78.6 42 81.0
vmacro01506 Vaccinium macrocarpon HOM05D005551 ORTHO05D007207 7.5e-13 78.6 42 78.6
Atru.chr2.2010 Acer truncatum HOM05D005551 ORTHO05D007207 9.9e-13 78.2 42 81.0
Actinidia24636 Actinidia chinensis HOM05D005551 ORTHO05D007207 9.9e-13 78.2 42 81.0
AL1G18920 Arabidopsis lyrata HOM05D005551 ORTHO05D007207 9.9e-13 78.2 42 78.6
Migut.I00341 Erythranthe guttata HOM05D005551 ORTHO05D007207 9.9e-13 78.2 42 78.6
Lsat_1_v5_gn_1_112501 Lactuca sativa HOM05D005551 ORTHO05D007207 9.9e-13 78.2 42 78.6
Lj6g0008086 Lotus japonicus HOM05D005551 ORTHO05D007207 9.9e-13 78.2 42 78.6
arahy.Tifrunner.gnm1.ann1.3K7MRP Arachis hypogaea HOM05D005551 ORTHO05D007207 1.3e-12 77.8 42 81.0
Gohir.D13G223200 Gossypium hirsutum HOM05D005551 ORTHO05D007207 1.3e-12 77.8 42 78.6
Potri.009G066000 Populus trichocarpa HOM05D005551 ORTHO05D007207 1.3e-12 77.8 42 83.3
Solyc05g055000.4 Solanum lycopersicum HOM05D005551 ORTHO05D007207 1.3e-12 77.8 42 81.0
Sopen05g033460 Solanum pennellii HOM05D005551 ORTHO05D007207 1.3e-12 77.8 42 81.0
ATR1127G182 Amborella trichopoda HOM05D005551 ORTHO05D007207 1.7e-12 77.4 42 78.6
arahy.Tifrunner.gnm1.ann1.ADF2XW Arachis hypogaea HOM05D005551 ORTHO05D007207 1.7e-12 77.4 42 78.6
arahy.Tifrunner.gnm1.ann1.JZUI2V Arachis hypogaea HOM05D005551 ORTHO05D007207 1.7e-12 77.4 42 78.6
CANSAT54G1233 Cannabis sativa HOM05D005551 ORTHO05D007207 1.7e-12 77.4 42 81.0
Eucgr.B03759 Eucalyptus grandis HOM05D005551 ORTHO05D007207 1.7e-12 77.4 42 81.0
SGA_v2.0_scaffold28G11755 Striga asiatica HOM05D005551 ORTHO05D007207 1.7e-12 77.4 42 78.6
Aa31sc55G30 Aethionema arabicum HOM05D005551 ORTHO05D007207 2.2e-12 77.0 42 81.0
Ca_16399_v3 Cicer arietinum L. HOM05D005551 ORTHO05D007207 2.2e-12 77.0 42 78.6
Thhalv10007548m.g Eutrema salsugineum HOM05D005551 ORTHO05D007207 2.2e-12 77.0 42 78.6
Lj2C43G5 Lonicera japonica HOM05D005551 ORTHO05D007207 2.2e-12 77.0 42 78.6
Lalb_Chr20g0119901 Lupinus albus HOM05D005551 ORTHO05D007207 2.2e-12 77.0 42 78.6
TAR369G0326 Trochodendron aralioides HOM05D005551 ORTHO05D007207 2.2e-12 77.0 42 78.6
AT1G08490 Arabidopsis thaliana HOM05D005551 ORTHO05D007207 2.9e-12 76.6 42 78.6
Hma1.2p1_0811F.1_g222040 Hydrangea macrophylla HOM05D005551 ORTHO05D007207 2.9e-12 76.6 44 72.7
PGR119G1886 Punica granatum HOM05D005551 ORTHO05D007207 2.9e-12 76.6 42 78.6
Rhsim11G0088800 Rhododendron simsii HOM05D005551 ORTHO05D007207 2.9e-12 76.6 42 76.2
CSS0006172 Camellia sinensis var. sinensis HOM05D005551 ORTHO05D007207 3.7e-12 76.3 42 81.0
CSS0046738 Camellia sinensis var. sinensis HOM05D005551 ORTHO05D007207 3.7e-12 76.3 42 81.0
Gorai.013G254300 Gossypium raimondii HOM05D005551 ORTHO05D007207 3.7e-12 76.3 42 78.6
MBI15_g32286_MAGBIO Magnolia biondii HOM05D005551 ORTHO05D007207 3.7e-12 76.3 44 75.0
Prupe.1G566600 Prunus persica HOM05D005551 ORTHO05D007207 3.7e-12 76.3 42 76.2
unitig_749.g13431 Utricularia gibba HOM05D005551 ORTHO05D007207 3.7e-12 76.3 44 75.0
GSVIVG01037384001 Vitis vinifera HOM05D005551 ORTHO05D007207 3.7e-12 76.3 42 78.6
Glyma.09G021000 Glycine max HOM05D005551 ORTHO05D007207 4.9e-12 75.9 42 76.2
Glyma.15G127400 Glycine max HOM05D005551 ORTHO05D007207 4.9e-12 75.9 42 76.2
Gohir.A13G219500 Gossypium hirsutum HOM05D005551 ORTHO05D007207 4.9e-12 75.9 42 76.2
Manes.02G135300 Manihot esculenta HOM05D005551 ORTHO05D007207 4.9e-12 75.9 42 78.6
Hund27398 Selenicereus undatus HOM05D005551 ORTHO05D007207 4.9e-12 75.9 42 78.6
EL10Ac4g10072 Beta vulgaris HOM05D005551 ORTHO05D007207 6.4e-12 75.5 42 81.0
Cpa.g.sc34.204 Carica papaya HOM05D005551 ORTHO05D007207 6.4e-12 75.5 42 78.6
Duzib150G0889 Durio zibethinus HOM05D005551 ORTHO05D007207 6.4e-12 75.5 42 76.2
Peaxi162Scf00015g00309 Petunia axillaris HOM05D005551 ORTHO05D007207 6.4e-12 75.5 42 78.6
Atru.chr4.868 Acer truncatum HOM05D005551 ORTHO05D007207 1.1e-11 74.7 42 76.2
CDE04G0986 Ceratophyllum demersum HOM05D005551 ORTHO05D007207 1.1e-11 74.7 42 76.2
FAN03G2212 Fragaria x ananassa HOM05D005551 ORTHO05D007207 1.1e-11 74.7 42 73.8
SGA_v2.0_scaffold25G10959 Striga asiatica HOM05D005551 ORTHO05D007207 1.1e-11 74.7 42 73.8
CAN.G1465.10 Capsicum annuum HOM05D005551 ORTHO05D007207 1.4e-11 74.3 42 76.2
Cfa010168 Carpinus fangiana HOM05D005551 ORTHO05D007207 1.4e-11 74.3 42 76.2
FvH4_7g04510 Fragaria vesca HOM05D005551 ORTHO05D007207 1.4e-11 74.3 42 73.8
FvH4_7g04540 Fragaria vesca HOM05D005551 ORTHO05D007207 1.4e-11 74.3 42 73.8
FAN06G0985 Fragaria x ananassa HOM05D005551 ORTHO05D007207 1.4e-11 74.3 42 73.8
FAN06G4389 Fragaria x ananassa HOM05D005551 ORTHO05D007207 1.4e-11 74.3 42 73.8
FAN10G0679 Fragaria x ananassa HOM05D005551 ORTHO05D007207 1.4e-11 74.3 42 73.8
Nitab4.5_0000914g0030 Nicotiana tabacum HOM05D005551 ORTHO05D007207 1.4e-11 74.3 42 76.2
Nitab4.5_0008548g0010 Nicotiana tabacum HOM05D005551 ORTHO05D007207 1.4e-11 74.3 42 76.2
SEGI_36821 Sequoiadendron giganteum HOM05D005551 ORTHO05D007207 1.4e-11 74.3 44 75.0
Aqoxy2G00719 Aquilegia oxysepala HOM05D005551 ORTHO05D007207 1.9e-11 73.9 47 70.2
AUR62004128 Chenopodium quinoa HOM05D005551 ORTHO05D007207 1.9e-11 73.9 42 76.2
RcHm_v2.0_Chr1g0329781 Rosa chinensis HOM05D005551 ORTHO05D007207 1.9e-11 73.9 42 73.8
EL10Ac1g00799 Beta vulgaris HOM05D005551 ORTHO05D007207 2.4e-11 73.6 42 78.6
Nn2g10251 Nelumbo nucifera HOM05D005551 ORTHO05D007207 2.4e-11 73.6 42 71.4
HPP92_018084 Vanilla planifolia HOM05D005551 ORTHO05D007207 2.4e-11 73.6 40 80.0
MD15G1421300 Malus domestica HOM05D005551 ORTHO05D007207 3.2e-11 73.2 42 76.2
Pp3c23_8390 Physcomitrium patens HOM05D005551 ORTHO05D007207 3.2e-11 73.2 55 60.0
arahy.Tifrunner.gnm1.ann1.H8KJMB Arachis hypogaea HOM05D005551 ORTHO05D007207 4.1e-11 72.8 40 77.5
Sc06g0004770 Simmondsia chinensis HOM05D005551 ORTHO05D007207 4.1e-11 72.8 42 71.4
THA.LOC104816954 Tarenaya hassleriana HOM05D005551 ORTHO05D007207 4.1e-11 72.8 42 73.8
VMungo0540G2337 Vigna mungo HOM05D005551 ORTHO05D007207 4.1e-11 72.8 42 73.8
AUR62006577 Chenopodium quinoa HOM05D005551 ORTHO05D007207 5.4e-11 72.4 42 71.4
PSO384G1940 Papaver somniferum HOM05D005551 ORTHO05D007207 5.4e-11 72.4 42 73.8
CBR_g4414 Chara braunii HOM05D005551 ORTHO05D007207 9.2e-11 71.6 77 50.6
CBR_g45931 Chara braunii HOM05D005551 ORTHO05D007207 9.2e-11 71.6 77 50.6
MELO3C014533.2 Cucumis melo HOM05D005551 ORTHO05D007207 1.2e-10 71.2 42 73.8
Os12g0287300 Oryza sativa ssp. japonica HOM05D005551 ORTHO05D007207 1.6e-10 70.9 42 76.2
Sed0003862 Sechium edule HOM05D005551 ORTHO05D007207 1.6e-10 70.9 42 73.8
SMO347G0159 Selaginella moellendorffii HOM05D005551 ORTHO05D007207 1.6e-10 70.9 42 71.4
Zm00001eb195480 Zea mays HOM05D005551 ORTHO05D007207 1.6e-10 70.9 42 73.8
PSO339G0296 Papaver somniferum HOM05D005551 ORTHO05D007207 2.1e-10 70.5 42 73.8
Mapoly0010s0063 Marchantia polymorpha HOM05D005551 ORTHO05D007207 2.7e-10 70.1 44 65.9
Pp3c24_10350 Physcomitrium patens HOM05D005551 ORTHO05D007207 2.7e-10 70.1 44 65.9
ClCG02G022570 Citrullus lanatus HOM05D005551 ORTHO05D007207 4.6e-10 69.3 42 71.4
CsaV3_6G038690 Cucumis sativus L. HOM05D005551 ORTHO05D001189 4.6e-10 69.3 42 71.4
PSO596G0056 Papaver somniferum HOM05D005551 ORTHO05D007207 4.6e-10 69.3 44 65.9
Phvul.006G131100 Phaseolus vulgaris HOM05D005551 ORTHO05D007207 4.6e-10 69.3 42 71.4
Cre12.g525650 Chlamydomonas reinhardtii HOM05D005551 ORTHO05D007207 1.8e-06 57.4 40 60.0
MCO11G678 Micromonas commoda HOM05D005551 ORTHO05D007207 3.1e-06 56.6 71 42.3


User provided reference genes

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