Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014411.1 Olea europaea HOM05D004985 ORTHO05D005912 4.1e-170 601.3 299 100.0
Oeu042721.3 Olea europaea HOM05D004985 ORTHO05D005912 2.8e-150 535.4 299 89.3
Hma1.2p1_0060F.1_g033100 Hydrangea macrophylla HOM05D004985 ORTHO05D005912 8.9e-133 477.2 299 79.3
MSTRG.9599 Avicennia marina HOM05D004985 ORTHO05D005912 2.0e-132 476.1 299 76.6
MSTRG.15338 Avicennia marina HOM05D004985 ORTHO05D005912 2.3e-128 462.6 303 74.9
CSS0016421 Camellia sinensis var. sinensis HOM05D004985 ORTHO05D005912 5.6e-127 458.0 299 74.9
CSS0040501 Camellia sinensis var. sinensis HOM05D004985 ORTHO05D005912 5.6e-127 458.0 299 74.9
QL10p019503 Quercus lobata HOM05D004985 ORTHO05D005912 5.6e-127 458.0 284 78.2
Migut.D01657 Erythranthe guttata HOM05D004985 ORTHO05D005912 1.6e-126 456.4 299 74.9
Atru.chr9.579 Acer truncatum HOM05D004985 ORTHO05D005912 1.8e-125 453.0 299 76.3
SalBow4G0956 Salvia bowleyana HOM05D004985 ORTHO05D005912 1.2e-124 450.3 299 73.6
Actinidia04825 Actinidia chinensis HOM05D004985 ORTHO05D004228 1.5e-124 449.9 301 73.8
Ciclev10021430m.g Citrus clementina HOM05D004985 ORTHO05D005912 1.5e-124 449.9 292 76.7
vmacro17610 Vaccinium macrocarpon HOM05D004985 ORTHO05D005912 7.6e-124 447.6 281 77.2
PGSC0003DMG400030337 Solanum tuberosum HOM05D004985 ORTHO05D005912 9.9e-124 447.2 298 75.2
COL.COLO4_06857 Corchorus olitorius HOM05D004985 ORTHO05D005912 1.7e-123 446.4 299 74.9
CAN.G394.86 Capsicum annuum HOM05D004985 ORTHO05D005912 2.2e-123 446.0 280 78.2
Solyc06g076510.3 Solanum lycopersicum HOM05D004985 ORTHO05D005912 2.2e-123 446.0 298 74.8
Dinv22782 Davidia involucrata HOM05D004985 ORTHO05D005912 8.4e-123 444.1 287 77.0
Sopen06g032910 Solanum pennellii HOM05D004985 ORTHO05D005912 8.4e-123 444.1 298 74.2
GSVIVG01007867001 Vitis vinifera HOM05D004985 ORTHO05D005912 1.1e-122 443.7 300 75.3
CiPaw.11G053300 Carya illinoinensis HOM05D004985 ORTHO05D005912 1.4e-122 443.4 299 73.6
SGA_v2.0_scaffold42G16037 Striga asiatica HOM05D004985 ORTHO05D005912 3.2e-122 442.2 299 72.2
Cc09_g09310 Coffea canephora HOM05D004985 ORTHO05D005912 5.4e-122 441.4 299 74.6
Prupe.5G205100 Prunus persica HOM05D004985 ORTHO05D005912 7.1e-122 441.0 292 75.7
Thecc.03G101800 Theobroma cacao HOM05D004985 ORTHO05D005912 1.2e-121 440.3 280 78.2
Eucgr.K02531 Eucalyptus grandis HOM05D004985 ORTHO05D005912 2.7e-121 439.1 299 74.9
Manes.14G085700 Manihot esculenta HOM05D004985 ORTHO05D005912 2.7e-121 439.1 299 73.2
Nitab4.5_0000116g0440 Nicotiana tabacum HOM05D004985 ORTHO05D005912 6.0e-121 438.0 279 77.4
TAR374G0278 Trochodendron aralioides HOM05D004985 ORTHO05D005912 1.7e-120 436.4 299 72.9
Potri.012G066200 Populus trichocarpa HOM05D004985 ORTHO05D005912 3.0e-120 435.6 280 76.4
Peaxi162Scf00481g00631 Petunia axillaris HOM05D004985 ORTHO05D005912 3.9e-120 435.3 299 73.6
Duzib205G0214 Durio zibethinus HOM05D004985 ORTHO05D005912 6.6e-120 434.5 276 77.9
Gohir.A07G068600 Gossypium hirsutum HOM05D004985 ORTHO05D005912 4.3e-119 431.8 300 73.0
Hund02586 Selenicereus undatus HOM05D004985 ORTHO05D005912 4.3e-119 431.8 299 70.6
AUR62021560 Chenopodium quinoa HOM05D004985 ORTHO05D005912 1.3e-118 430.3 299 71.2
Cpa.g.sc94.56 Carica papaya HOM05D004985 ORTHO05D005912 1.6e-118 429.9 299 73.6
TWI31G1299 Tripterygium wilfordii HOM05D004985 ORTHO05D005912 1.6e-118 429.9 299 73.6
Gohir.D07G073100 Gossypium hirsutum HOM05D004985 ORTHO05D005912 2.8e-118 429.1 300 72.3
Gorai.001G077300 Gossypium raimondii HOM05D004985 ORTHO05D005912 6.2e-118 427.9 300 72.0
AUR62008533 Chenopodium quinoa HOM05D004985 ORTHO05D005912 2.4e-117 426.0 299 70.6
MBI19_g00634_MAGBIO Magnolia biondii HOM05D004985 ORTHO05D005912 6.9e-117 424.5 279 75.3
CSS0005049 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D005912 9.0e-117 424.1 312 71.2
CsaV3_1G002920 Cucumis sativus L. HOM05D004985 ORTHO05D005912 9.0e-117 424.1 299 70.2
PGR044G1445 Punica granatum HOM05D004985 ORTHO05D005912 9.0e-117 424.1 299 69.9
Nitab4.5_0004739g0030 Nicotiana tabacum HOM05D004985 ORTHO05D005912 1.2e-116 423.7 286 75.2
RcHm_v2.0_Chr7g0183091 Rosa chinensis HOM05D004985 ORTHO05D005912 4.5e-116 421.8 286 73.4
Manes.06G084800 Manihot esculenta HOM05D004985 ORTHO05D005912 1.7e-115 419.9 252 81.0
Sabra12G0048600 Salix brachista HOM05D004985 ORTHO05D005912 2.2e-115 419.5 301 70.8
PSO017G5703 Papaver somniferum HOM05D004985 ORTHO05D005912 4.9e-115 418.3 299 70.2
Aqoxy3G03694 Aquilegia oxysepala HOM05D004985 ORTHO05D005912 8.4e-115 417.5 301 71.1
Lsat_1_v5_gn_2_122560 Lactuca sativa HOM05D004985 ORTHO05D005912 8.4e-115 417.5 279 73.5
FAN13G1687 Fragaria x ananassa HOM05D004985 ORTHO05D005912 1.4e-114 416.8 303 70.0
Sed0020095 Sechium edule HOM05D004985 ORTHO05D005912 5.4e-114 414.8 299 68.6
ECA232G4926 Erigeron canadensis HOM05D004985 ORTHO05D005912 9.3e-114 414.1 299 68.9
THA.LOC104812106 Tarenaya hassleriana HOM05D004985 ORTHO05D005912 1.2e-113 413.7 299 71.2
FvH4_5g13840 Fragaria vesca HOM05D004985 ORTHO05D005912 2.7e-113 412.5 287 72.5
PSO478G5014 Papaver somniferum HOM05D004985 ORTHO05D005912 7.9e-113 411.0 299 69.6
ClCG06G015640 Citrullus lanatus HOM05D004985 ORTHO05D005912 1.3e-112 410.2 314 66.6
MD14G1211600 Malus domestica HOM05D004985 ORTHO05D005912 4.3e-111 405.2 252 80.2
Rhsim08G0146000 Rhododendron simsii HOM05D004985 ORTHO05D005912 5.6e-111 404.8 370 59.2
HanXRQChr09g0270221 Helianthus annuus HOM05D004985 ORTHO05D005912 7.4e-111 404.4 255 77.3
Haze_18480 Corylus avellana HOM05D004985 ORTHO05D005912 9.6e-111 404.1 286 70.6
MD06G1202500 Malus domestica HOM05D004985 ORTHO05D005912 1.3e-110 403.7 252 80.6
TWI79G1560 Tripterygium wilfordii HOM05D004985 ORTHO05D005912 1.3e-110 403.7 231 83.5
arahy.Tifrunner.gnm1.ann1.B21894 Arachis hypogaea HOM05D004985 ORTHO05D005912 1.6e-110 403.3 301 68.4
TPR.G12221 Trifolium pratense HOM05D004985 ORTHO05D005912 1.6e-110 403.3 287 69.0
MELO3C017224.2 Cucumis melo HOM05D004985 ORTHO05D005912 4.8e-110 401.7 334 63.2
DCAR_029981 Daucus carota HOM05D004985 ORTHO05D005912 6.2e-110 401.4 245 79.2
arahy.Tifrunner.gnm1.ann1.XT1KNI Arachis hypogaea HOM05D004985 ORTHO05D005912 8.1e-110 401.0 301 67.8
Ca_14341_v3 Cicer arietinum L. HOM05D004985 ORTHO05D005912 1.4e-109 400.2 288 68.4
CANSAT35G1156 Cannabis sativa HOM05D004985 ORTHO05D005912 1.8e-109 399.8 284 71.8
Glyma.04G162700 Glycine max HOM05D004985 ORTHO05D005912 5.3e-109 398.3 298 68.1
AL1G31080 Arabidopsis lyrata HOM05D004985 ORTHO05D005912 6.9e-109 397.9 299 66.9
AT1G18640 Arabidopsis thaliana HOM05D004985 ORTHO05D005912 7.6e-108 394.4 299 66.2
CARHR019270 Cardamine hirsuta HOM05D004985 ORTHO05D005912 7.6e-108 394.4 299 66.2
Thhalv10008334m.g Eutrema salsugineum HOM05D004985 ORTHO05D005912 7.6e-108 394.4 259 74.1
Psat5g208200 Pisum sativum HOM05D004985 ORTHO05D005912 1.3e-107 393.7 288 68.8
Medtr3g025840 Medicago truncatula HOM05D004985 ORTHO05D005912 2.2e-107 392.9 288 67.0
Sp1g16610 Schrenkiella parvula HOM05D004985 ORTHO05D005912 8.4e-107 391.0 259 73.0
Sed0001113 Sechium edule HOM05D004985 ORTHO05D005912 8.4e-107 391.0 299 66.2
BcaB07g31884 Brassica carinata HOM05D004985 ORTHO05D005912 1.9e-106 389.8 259 72.2
BcaC05g25759 Brassica carinata HOM05D004985 ORTHO05D005912 2.4e-106 389.4 259 72.2
C05p16910 Brassica napus HOM05D004985 ORTHO05D005912 2.4e-106 389.4 259 72.2
BolC5t30393H Brassica oleracea HOM05D004985 ORTHO05D005912 2.4e-106 389.4 259 72.2
A06p14760 Brassica napus HOM05D004985 ORTHO05D005912 3.2e-106 389.0 259 71.4
BraA06t24599Z Brassica rapa HOM05D004985 ORTHO05D005912 3.2e-106 389.0 259 71.4
Glyma.06G203300 Glycine max HOM05D004985 ORTHO05D005912 4.2e-106 388.7 233 80.7
Carub.0001s1827 Capsella rubella HOM05D004985 ORTHO05D005912 1.6e-105 386.7 299 65.2
Carub.0007s3048 Capsella rubella HOM05D004985 ORTHO05D005912 1.6e-105 386.7 300 65.3
TPR.G28540 Trifolium pratense HOM05D004985 ORTHO05D005912 4.6e-105 385.2 300 65.0
Phvul.010G007300 Phaseolus vulgaris HOM05D004985 ORTHO05D005912 1.8e-104 383.3 233 79.0
FAN08G1159 Fragaria x ananassa HOM05D004985 ORTHO05D005912 3.0e-104 382.5 287 69.7
Aa31LG7G3400 Aethionema arabicum HOM05D004985 ORTHO05D005912 3.9e-104 382.1 335 61.5
FAN18G1860 Fragaria x ananassa HOM05D004985 ORTHO05D005912 6.7e-104 381.3 287 68.3
Lj1g0020192 Lotus japonicus HOM05D004985 ORTHO05D005912 6.7e-104 381.3 239 77.4
A08p30280 Brassica napus HOM05D004985 ORTHO05D005912 2.5e-103 379.4 256 70.7
Lalb_Chr12g0197201 Lupinus albus HOM05D004985 ORTHO05D005912 4.3e-103 378.6 228 80.3
AUR62008530 Chenopodium quinoa HOM05D004985 ORTHO05D005912 6.2e-102 374.8 299 64.5
VMungo0331G0044 Vigna mungo HOM05D004985 ORTHO05D005912 6.2e-102 374.8 233 77.7
unitig_60.g25411 Utricularia gibba HOM05D004985 ORTHO05D005912 2.6e-100 369.4 294 62.6
C08p18810 Brassica napus HOM05D004985 ORTHO05D005912 1.3e-99 367.1 309 61.8
Nn4g23424 Nelumbo nucifera HOM05D004985 ORTHO05D005912 1.7e-99 366.7 288 66.7
EL10Ac8g18666 Beta vulgaris HOM05D004985 ORTHO05D005912 2.2e-99 366.3 221 79.6
TAR622G1020 Trochodendron aralioides HOM05D004985 ORTHO05D005912 2.2e-99 366.3 305 63.6
BraA08t34961Z Brassica rapa HOM05D004985 ORTHO05D005912 6.5e-99 364.8 226 76.1
ATR0681G325 Amborella trichopoda HOM05D004985 ORTHO05D005912 4.6e-97 358.6 224 75.9
Lj1g0027941 Lotus japonicus HOM05D004985 ORTHO05D005912 7.9e-97 357.8 233 76.4
Os11g0629500 Oryza sativa ssp. japonica HOM05D004985 ORTHO05D005912 1.3e-96 357.1 235 75.7
Duzib084G0347 Durio zibethinus HOM05D004985 ORTHO05D005912 5.1e-96 355.1 281 65.1
Nn3g17450 Nelumbo nucifera HOM05D004985 ORTHO05D005912 1.5e-95 353.6 261 71.3
Os12g0502400 Oryza sativa ssp. japonica HOM05D004985 ORTHO05D005912 2.5e-95 352.8 299 62.2
Zm00001eb166440 Zea mays HOM05D004985 ORTHO05D005912 6.9e-93 344.7 248 69.0
BolC8t49507H Brassica oleracea HOM05D004985 ORTHO05D005912 3.6e-89 332.4 226 72.1
BcaC07g38933 Brassica carinata HOM05D004985 ORTHO05D005912 7.9e-89 331.3 223 72.6
Sc10g0009710 Simmondsia chinensis HOM05D004985 ORTHO05D005912 1.0e-88 330.9 242 68.6
Cc11_g04830 Coffea canephora HOM05D004985 ORTHO05D005912 1.7e-86 323.6 261 66.3
AagrBONN_evm.TU.Sc2ySwM_228.2773 Anthoceros agrestis HOM05D004985 ORTHO05D005912 5.3e-85 318.5 226 65.9
Pp3c8_16890 Physcomitrium patens HOM05D004985 ORTHO05D005912 2.0e-84 316.6 228 66.7
SMO137G0315 Selaginella moellendorffii HOM05D004985 ORTHO05D005912 7.7e-84 314.7 225 66.2
CDE06G0240 Ceratophyllum demersum HOM05D004985 ORTHO05D005912 3.8e-83 312.4 205 75.6
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 7.9e-81 304.7 228 64.9
Mapoly0023s0019 Marchantia polymorpha HOM05D004985 ORTHO05D005912 4.4e-79 298.9 219 66.2
CDE07G0155 Ceratophyllum demersum HOM05D004985 ORTHO05D005912 7.0e-77 291.6 283 53.7
Actinidia16126 Actinidia chinensis HOM05D003322 ORTHO05D005912 1.1e-74 284.3 290 54.1
Nitab4.5_0000744g0020 Nicotiana tabacum HOM05D004985 ORTHO05D005912 2.5e-74 283.1 428 42.5
PRCOL_00003809 Prasinoderma coloniale HOM05D004985 ORTHO05D005912 2.7e-65 253.1 228 57.9
Lj7A653T48 Lonicera japonica HOM05D004985 ORTHO05D005912 6.7e-64 248.4 142 85.2
SGA_v2.0_scaffold3G01460 Striga asiatica HOM05D004985 ORTHO05D005912 9.7e-63 244.6 142 83.8
MCO16G297 Micromonas commoda HOM05D004985 ORTHO05D005912 5.3e-61 238.8 224 52.2
Cre04.g217955 Chlamydomonas reinhardtii HOM05D004985 ORTHO05D005912 1.0e-59 234.6 220 52.3
Cre04.g217959 Chlamydomonas reinhardtii HOM05D004985 ORTHO05D005912 1.0e-59 234.6 220 52.3
Nitab4.5_0002968g0050 Nicotiana tabacum HOM05D004985 ORTHO05D005912 2.9e-59 233.0 133 83.5
Haze_07724 Corylus avellana HOM05D004985 ORTHO05D005912 5.2e-56 222.2 163 68.1
Cre01.g053000 Chlamydomonas reinhardtii HOM05D004424 ORTHO05D005476 5.9e-52 208.8 276 42.8
Cre01.g053150 Chlamydomonas reinhardtii HOM05D004424 ORTHO05D005476 2.9e-51 206.5 250 44.8
SGA_v2.0_scaffold1066G53824 Striga asiatica HOM05D004985 ORTHO05D005912 3.8e-51 206.1 167 62.9
Cre10.g421700 Chlamydomonas reinhardtii HOM05D004424 ORTHO05D005476 5.0e-51 205.7 247 44.1
HPP92_012184 Vanilla planifolia HOM05D004985 ORTHO05D005912 1.1e-50 204.5 179 59.8
HPP92_012182 Vanilla planifolia HOM05D004985 ORTHO05D005912 4.1e-45 186.0 112 80.4
EL10Ac1g02367 Beta vulgaris HOM05D004985 ORTHO05D005912 6.6e-43 178.7 284 40.5
Gohir.A07G164340 Gossypium hirsutum HOM05D004985 ORTHO05D005912 1.4e-37 161.0 99 80.8
Gohir.A06G085600 Gossypium hirsutum HOM05D004985 ORTHO05D005912 1.3e-35 154.5 96 80.2
Peaxi162Scf00086g01110 Petunia axillaris HOM05D004985 ORTHO05D005912 3.0e-35 153.3 160 56.9
CBR_g37694 Chara braunii HOM05D004985 ORTHO05D005912 6.6e-35 152.1 109 64.2
Oeu014405.1 Olea europaea HOM05D004985 ORTHO05D005912 2.9e-30 136.7 92 77.2
SEGI_10948 Sequoiadendron giganteum HOM05D004985 ORTHO05D005912 6.4e-30 135.6 81 77.8
SalBow5G1356 Salvia bowleyana HOM05D004985 ORTHO05D005912 1.6e-28 131.0 101 70.3
Cfa004103 Carpinus fangiana HOM05D004985 ORTHO05D005912 6.6e-27 125.6 157 49.7
Haze_15308 Corylus avellana HOM05D004985 ORTHO05D005912 4.1e-21 106.3 67 77.6
SHI27080 Sapria himalayana HOM05D004985 ORTHO05D005912 4.6e-20 102.8 125 46.4
Cfa024059 Carpinus fangiana HOM05D004985 ORTHO05D005912 1.9e-10 70.9 177 31.6


User provided reference genes

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