Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 4.3e-92 341.3 170 100.0
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 4.5e-73 278.1 170 80.6
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 1.3e-72 276.6 163 82.2
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 1.9e-71 272.7 171 79.5
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.6e-70 269.6 163 79.8
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 6.1e-70 267.7 169 78.1
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 8.0e-70 267.3 169 77.5
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 5.2e-69 264.6 163 79.1
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.2e-68 263.5 162 78.4
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 1.2e-68 263.5 163 79.1
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 7.5e-68 260.8 163 78.5
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 2.2e-67 259.2 163 77.9
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 2.2e-67 259.2 163 77.9
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 3.7e-67 258.5 163 76.7
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 1.3e-64 250.0 163 75.5
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 1.7e-64 249.6 163 73.6
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 2.2e-64 249.2 163 73.6
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 2.9e-64 248.8 163 75.5
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 3.8e-64 248.4 164 73.2
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 5.0e-64 248.1 164 73.8
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 1.1e-63 246.9 162 74.1
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 4.2e-63 245.0 152 78.3
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 4.2e-63 245.0 152 78.9
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 9.5e-63 243.8 163 71.8
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 1.4e-61 240.0 164 71.3
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 2.3e-61 239.2 163 69.9
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 3.0e-61 238.8 163 70.6
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 6.8e-61 237.7 163 70.6
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 6.8e-61 237.7 163 70.6
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 8.8e-61 237.3 159 74.2
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 4.4e-60 235.0 163 69.3
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 7.5e-60 234.2 164 70.1
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 2.2e-59 232.6 163 69.9
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 4.9e-59 231.5 163 67.5
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 4.9e-59 231.5 163 67.5
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 6.3e-59 231.1 163 68.1
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 8.3e-59 230.7 163 66.3
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 8.3e-59 230.7 160 68.8
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 8.3e-59 230.7 164 69.5
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 1.1e-58 230.3 164 68.9
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 1.4e-58 229.9 163 68.1
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 1.8e-58 229.6 163 66.9
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 1.8e-58 229.6 163 68.1
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 2.4e-58 229.2 163 67.5
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 2.4e-58 229.2 165 65.5
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 2.4e-58 229.2 163 68.1
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 5.4e-58 228.0 162 68.5
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 1.6e-57 226.5 163 66.9
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 1.6e-57 226.5 164 66.5
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 1.6e-57 226.5 211 56.9
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.0e-56 223.8 165 66.7
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 1.0e-56 223.8 163 65.6
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 2.3e-56 222.6 165 66.1
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 5.0e-56 221.5 163 66.3
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 8.6e-56 220.7 163 67.5
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 8.6e-56 220.7 162 66.7
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 1.1e-55 220.3 162 66.7
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 3.3e-55 218.8 157 70.1
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 1.2e-54 216.9 159 67.3
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 1.2e-54 216.9 159 67.3
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.6e-54 216.5 165 65.5
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 1.6e-54 216.5 163 63.8
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 2.8e-54 215.7 163 63.8
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 2.8e-54 215.7 163 63.2
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 6.1e-54 214.5 162 63.6
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 8.0e-54 214.2 158 65.8
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 8.0e-54 214.2 162 65.4
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 3.0e-53 212.2 162 63.0
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 4.0e-53 211.8 199 56.8
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 6.8e-53 211.1 164 63.4
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 1.2e-52 210.3 163 62.0
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 1.2e-52 210.3 163 61.3
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 2.0e-52 209.5 166 62.0
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 2.0e-52 209.5 166 62.0
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 2.6e-52 209.1 163 62.6
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 4.4e-52 208.4 162 63.0
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 4.4e-52 208.4 157 64.3
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 1.7e-51 206.5 166 62.0
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.7e-51 206.5 172 61.6
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 3.7e-51 205.3 161 62.1
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 4.9e-51 204.9 160 63.8
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 6.4e-51 204.5 166 60.8
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 8.3e-51 204.1 166 61.4
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 8.3e-51 204.1 166 60.8
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 8.3e-51 204.1 166 60.8
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 1.1e-50 203.8 166 60.2
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.1e-50 203.8 166 60.2
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 1.1e-50 203.8 166 60.2
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 1.8e-50 203.0 166 60.8
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 1.8e-50 203.0 149 68.5
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 2.4e-50 202.6 166 60.8
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 7.0e-50 201.1 166 59.6
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 7.0e-50 201.1 166 59.6
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 9.2e-50 200.7 166 59.6
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 1.3e-48 196.8 136 68.4
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 1.7e-48 196.4 167 58.1
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 3.0e-48 195.7 164 61.6
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 3.9e-48 195.3 155 61.9
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 3.9e-48 195.3 161 61.5
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 5.6e-47 191.4 143 63.6
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 2.1e-46 189.5 152 60.5
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 6.2e-46 188.0 153 61.4
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 6.8e-45 184.5 157 58.6
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 8.3e-43 177.6 168 55.4
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.4e-42 176.0 168 54.8
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.4e-42 176.0 168 54.8
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 4.1e-42 175.3 160 55.0
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 7.0e-42 174.5 155 57.4
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 7.3e-39 164.5 107 76.6
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 9.5e-39 164.1 149 55.0
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 2.6e-36 156.0 156 49.4
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 6.0e-33 144.8 107 67.3
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 4.3e-31 138.7 157 46.5
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 7.3e-31 137.9 163 47.2
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 1.6e-30 136.7 108 63.0
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 3.1e-29 132.5 152 41.4
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 2.9e-27 125.9 105 62.9
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 2.3e-24 116.3 79 69.6
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 6.2e-22 108.2 79 62.0
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.8e-21 106.7 79 65.8
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 3.1e-21 105.9 80 58.8
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 1.5e-20 103.6 79 63.3
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 1.5e-20 103.6 79 63.3
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 2.2e-19 99.8 150 35.3
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 3.2e-18 95.9 56 80.4
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 2.5e-15 86.3 60 65.0
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 7.3e-15 84.7 56 67.9
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 5.8e-12 75.1 56 64.3
BraA10t43197Z Brassica rapa HOM05D002209 ORTHO05D033214 3.9e-08 62.4 47 59.6
BolC6t38528H Brassica oleracea HOM05D002209 ORTHO05D033214 8.7e-08 61.2 46 58.7


User provided reference genes

Program Settings