Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 6.8e-47 190.3 93 100.0
MSTRG.20093 Avicennia marina HOM05D007227 ORTHO05D002252 1.7e-21 105.9 95 58.9
MSTRG.27703 Avicennia marina HOM05D007227 ORTHO05D002252 7.1e-20 100.5 93 53.8
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 6.6e-18 94.0 74 56.8
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 5.6e-17 90.9 99 48.5
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 3.6e-16 88.2 91 51.6
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 3.6e-16 88.2 76 53.9
Glyma.02G300900 Glycine max HOM05D007227 ORTHO05D002252 8.1e-16 87.0 76 55.3
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 1.1e-15 86.7 79 50.6
SalBow3G1687 Salvia bowleyana HOM05D007227 ORTHO05D002252 1.4e-15 86.3 93 50.5
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 3.1e-15 85.1 97 48.5
Migut.N01231 Erythranthe guttata HOM05D007227 ORTHO05D002252 5.2e-15 84.3 89 49.4
TPR.G9008 Trifolium pratense HOM05D007227 ORTHO05D002252 6.8e-15 84.0 76 50.0
CSS0026369 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 8.9e-15 83.6 84 48.8
Lsat_1_v5_gn_9_109540 Lactuca sativa HOM05D007227 ORTHO05D002252 1.2e-14 83.2 63 60.3
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 1.5e-14 82.8 73 53.4
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 2.0e-14 82.4 78 50.0
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 3.4e-14 81.6 75 50.7
Lj9C368G9 Lonicera japonica HOM05D007227 ORTHO05D002252 4.4e-14 81.3 76 47.4
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 7.6e-14 80.5 78 48.7
Glyma.11G119200 Glycine max HOM05D007227 ORTHO05D002252 9.9e-14 80.1 87 46.0
MD00G1082000 Malus domestica HOM05D007227 ORTHO05D002252 9.9e-14 80.1 86 51.2
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 9.9e-14 80.1 73 50.7
Lj3g0002713 Lotus japonicus HOM05D007227 ORTHO05D002252 1.3e-13 79.7 79 50.6
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 1.7e-13 79.3 78 48.7
FvH4_2g08520 Fragaria vesca HOM05D007227 ORTHO05D002252 1.7e-13 79.3 96 42.7
FAN24G3084 Fragaria x ananassa HOM05D007227 ORTHO05D002252 1.7e-13 79.3 96 42.7
Glyma.12G044400 Glycine max HOM05D007227 ORTHO05D002252 1.7e-13 79.3 76 50.0
FAN15G1220 Fragaria x ananassa HOM05D007227 ORTHO05D002252 2.2e-13 79.0 96 41.7
MD10G1078100 Malus domestica HOM05D007227 ORTHO05D002252 2.2e-13 79.0 71 52.1
SalBow6G0041 Salvia bowleyana HOM05D007227 ORTHO05D002252 2.2e-13 79.0 78 53.8
SalBow6G1279 Salvia bowleyana HOM05D007227 ORTHO05D002252 2.2e-13 79.0 78 53.8
Cc07_g14570 Coffea canephora HOM05D007227 ORTHO05D002252 2.9e-13 78.6 93 41.9
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 3.8e-13 78.2 77 46.8
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 6.4e-13 77.4 78 46.2
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 8.4e-13 77.0 75 48.0
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 8.4e-13 77.0 79 49.4
Nitab4.5_0001794g0120 Nicotiana tabacum HOM05D007227 ORTHO05D002252 1.1e-12 76.6 68 50.0
Thecc.02G037700 Theobroma cacao HOM05D007227 ORTHO05D002252 1.1e-12 76.6 90 46.7
CSS0037950 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 1.4e-12 76.3 95 43.2
RcHm_v2.0_Chr6g0263881 Rosa chinensis HOM05D007227 ORTHO05D002252 1.9e-12 75.9 75 46.7
ECA236G1258 Erigeron canadensis HOM05D007227 ORTHO05D002252 2.4e-12 75.5 78 46.2
Sabra04G0101600 Salix brachista HOM05D007227 ORTHO05D002252 2.4e-12 75.5 79 46.8
TPR.G8589 Trifolium pratense HOM05D007227 ORTHO05D002252 2.4e-12 75.5 75 48.0
HanXRQChr16g0505811 Helianthus annuus HOM05D007227 ORTHO05D002252 4.2e-12 74.7 79 50.6
Medtr5g095980 Medicago truncatula HOM05D007227 ORTHO05D002252 4.2e-12 74.7 96 42.7
Peaxi162Scf00016g00938 Petunia axillaris HOM05D007227 ORTHO05D002252 5.4e-12 74.3 88 44.3
LjContig00081g0025580 Lotus japonicus HOM05D007227 ORTHO05D002252 7.1e-12 73.9 75 49.3
arahy.Tifrunner.gnm1.ann1.16ZZBQ Arachis hypogaea HOM05D007227 ORTHO05D002252 9.3e-12 73.6 76 46.1
arahy.Tifrunner.gnm1.ann1.ZTQ30L Arachis hypogaea HOM05D007227 ORTHO05D002252 9.3e-12 73.6 76 47.4
EL10Ac9g21739 Beta vulgaris HOM05D007227 ORTHO05D002252 9.3e-12 73.6 83 42.2
FAN27G2103 Fragaria x ananassa HOM05D007227 ORTHO05D002252 1.2e-11 73.2 96 38.5
Prupe.8G099800 Prunus persica HOM05D007227 ORTHO05D002252 1.2e-11 73.2 75 49.3
PGR142G1531 Punica granatum HOM05D007227 ORTHO05D002252 1.2e-11 73.2 69 52.2
Lalb_Chr23g0265441 Lupinus albus HOM05D007227 ORTHO05D002252 2.7e-11 72.0 83 45.8
Peaxi162Scf00003g01323 Petunia axillaris HOM05D007227 ORTHO05D002252 3.5e-11 71.6 79 45.6
LjContig00081g0009252 Lotus japonicus HOM05D007227 ORTHO05D002252 7.8e-11 70.5 71 45.1
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 1.0e-10 70.1 85 43.5
Gohir.A01G178500 Gossypium hirsutum HOM05D007227 ORTHO05D002252 1.0e-10 70.1 67 46.3
Potri.004G153200 Populus trichocarpa HOM05D007227 ORTHO05D002252 1.0e-10 70.1 79 45.6
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 1.3e-10 69.7 67 46.3
HanXRQChr04g0127891 Helianthus annuus HOM05D007227 ORTHO05D002252 1.3e-10 69.7 70 50.0
Phvul.009G024600 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 1.7e-10 69.3 73 50.7
Potri.009G114400 Populus trichocarpa HOM05D007227 ORTHO05D002252 2.3e-10 68.9 71 50.7
AUR62011338 Chenopodium quinoa HOM05D007227 ORTHO05D002252 3.9e-10 68.2 77 45.5
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 3.9e-10 68.2 67 44.8
Lj1g0025376 Lotus japonicus HOM05D007227 ORTHO05D002252 3.9e-10 68.2 71 43.7
LjContig00272g0019714 Lotus japonicus HOM05D007227 ORTHO05D002252 3.9e-10 68.2 78 43.6
Ah.01g019500 Amaranthus hybridus HOM05D007227 ORTHO05D002252 5.1e-10 67.8 82 40.2
Sopen01g051670 Solanum pennellii HOM05D007227 ORTHO05D002252 5.1e-10 67.8 89 46.1
AUR62016714 Chenopodium quinoa HOM05D013587 ORTHO05D002252 6.6e-10 67.4 75 44.0
Sed0019925 Sechium edule HOM05D007227 ORTHO05D002252 6.6e-10 67.4 68 47.1
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 6.6e-10 67.4 71 43.7
CsaV3_2G014630 Cucumis sativus L. HOM05D007227 ORTHO05D002252 8.7e-10 67.0 90 36.7
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 8.7e-10 67.0 77 39.0
HanXRQChr16g0524731 Helianthus annuus HOM05D017364 ORTHO05D002252 1.1e-09 66.6 83 41.0
Medtr3g007880 Medicago truncatula HOM05D007227 ORTHO05D002252 1.1e-09 66.6 79 43.0
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 1.5e-09 66.2 78 46.2
Rhsim11G0174800 Rhododendron simsii HOM05D007227 ORTHO05D002252 1.5e-09 66.2 75 45.3
FAN24G0729 Fragaria x ananassa HOM05D007227 ORTHO05D002252 2.5e-09 65.5 69 44.9
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 2.5e-09 65.5 72 40.3
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 2.5e-09 65.5 72 40.3
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 3.3e-09 65.1 93 39.8
Psat2g007200 Pisum sativum HOM05D007227 ORTHO05D002252 3.3e-09 65.1 64 45.3
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 4.3e-09 64.7 90 38.9
COL.COLO4_17856 Corchorus olitorius HOM05D007227 ORTHO05D002252 4.3e-09 64.7 84 46.4
Psat2g007160 Pisum sativum HOM05D007227 ORTHO05D002252 7.3e-09 63.9 64 43.8
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 9.6e-09 63.5 93 38.7
HanXRQChr13g0410611 Helianthus annuus HOM05D017364 ORTHO05D002252 9.6e-09 63.5 82 39.0
TWI75G0964 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 1.3e-08 63.2 79 43.0
CSS0038929 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 1.6e-08 62.8 58 44.8
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.6e-08 62.8 96 36.5
EL10Ac4g09227 Beta vulgaris HOM05D037403 ORTHO05D002252 2.1e-08 62.4 79 43.0
AUR62011343 Chenopodium quinoa HOM05D013587 ORTHO05D002252 2.1e-08 62.4 84 40.5
AUR62011345 Chenopodium quinoa HOM05D013587 ORTHO05D002252 2.1e-08 62.4 84 40.5
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.1e-08 62.4 88 39.8
PGSC0003DMG400010828 Solanum tuberosum HOM05D007556 ORTHO05D002252 2.1e-08 62.4 66 42.4
arahy.Tifrunner.gnm1.ann1.24P8DN Arachis hypogaea HOM05D007227 ORTHO05D002252 2.8e-08 62.0 79 40.5
arahy.Tifrunner.gnm1.ann1.3LC685 Arachis hypogaea HOM05D007227 ORTHO05D002252 2.8e-08 62.0 79 40.5
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 2.8e-08 62.0 96 35.4
HanXRQChr01g0007701 Helianthus annuus HOM05D017364 ORTHO05D002252 2.8e-08 62.0 83 41.0
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 3.6e-08 61.6 92 38.0
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 3.6e-08 61.6 76 40.8
TWI31G1433 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 3.6e-08 61.6 73 42.5
arahy.Tifrunner.gnm1.ann1.9WD8WJ Arachis hypogaea HOM05D007227 ORTHO05D002252 4.8e-08 61.2 79 39.2
arahy.Tifrunner.gnm1.ann1.BHH580 Arachis hypogaea HOM05D007227 ORTHO05D002252 4.8e-08 61.2 74 40.5
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 4.8e-08 61.2 87 36.8
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 8.1e-08 60.5 96 34.4
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 8.1e-08 60.5 86 34.9
Hund00277 Selenicereus undatus HOM05D013587 ORTHO05D002252 8.1e-08 60.5 83 39.8
Sopen10g004930 Solanum pennellii HOM05D007556 ORTHO05D002252 8.1e-08 60.5 76 40.8
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 8.1e-08 60.5 93 37.6
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 1.1e-07 60.1 69 47.8
Manes.17G100100 Manihot esculenta HOM05D007227 ORTHO05D002252 1.1e-07 60.1 78 41.0
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 1.1e-07 60.1 59 52.5
TWI31G0501 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 1.4e-07 59.7 68 39.7
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.8e-07 59.3 84 40.5
arahy.Tifrunner.gnm1.ann1.YB55U6 Arachis hypogaea HOM05D007227 ORTHO05D002252 2.4e-07 58.9 61 41.0
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.1e-07 58.5 84 40.5
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 3.1e-07 58.5 93 35.5
ClCG11G004490 Citrullus lanatus HOM05D007227 ORTHO05D002252 4.0e-07 58.2 76 36.8
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.0e-07 58.2 84 38.1
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 5.3e-07 57.8 75 34.7
Nitab4.5_0011008g0030 Nicotiana tabacum HOM05D007227 ORTHO05D002252 6.9e-07 57.4 56 46.4
Manes.15G164600 Manihot esculenta HOM05D007227 ORTHO05D002252 9.0e-07 57.0 86 36.0
MELO3C020982.2 Cucumis melo HOM05D007227 ORTHO05D002252 1.2e-06 56.6 78 37.2
HanXRQChr16g0524721 Helianthus annuus HOM05D017364 ORTHO05D002252 1.2e-06 56.6 65 43.1
AT1G49310 Arabidopsis thaliana HOM05D009461 ORTHO05D002252 1.5e-06 56.2 68 41.2
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.5e-06 56.2 75 40.0
Hund00291 Selenicereus undatus HOM05D013587 ORTHO05D002252 1.5e-06 56.2 76 40.8
EL10Ac9g21743 Beta vulgaris HOM05D013587 ORTHO05D002252 2.0e-06 55.8 62 37.1
Duzib132G0468 Durio zibethinus HOM05D007227 ORTHO05D002252 2.0e-06 55.8 78 38.5
PGR042G2841 Punica granatum HOM05D007227 ORTHO05D002252 2.0e-06 55.8 72 45.8
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 2.0e-06 55.8 84 34.5
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 2.0e-06 55.8 84 36.9
vmacro17500 Vaccinium macrocarpon HOM05D017364 ORTHO05D002252 2.6e-06 55.5 85 43.5
Hma1.2p1_0066F.1_g036590 Hydrangea macrophylla HOM05D007227 ORTHO05D002252 3.4e-06 55.1 53 49.1
Lsat_1_v5_gn_7_89361 Lactuca sativa HOM05D007227 ORTHO05D002252 3.4e-06 55.1 44 56.8
Manes.07G098500 Manihot esculenta HOM05D007556 ORTHO05D002252 3.4e-06 55.1 82 39.0
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 4.4e-06 54.7 40 57.5
Sc08g0000440 Simmondsia chinensis HOM05D007227 ORTHO05D002252 4.4e-06 54.7 83 38.6
AL1G56260 Arabidopsis lyrata HOM05D009461 ORTHO05D002252 5.8e-06 54.3 68 39.7
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 5.8e-06 54.3 97 34.0
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.8e-06 54.3 86 33.7
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 5.8e-06 54.3 84 34.5
Atru.chr5.2993 Acer truncatum HOM05D007227 ORTHO05D002252 7.6e-06 53.9 90 36.7
AL1G56180 Arabidopsis lyrata HOM05D009461 ORTHO05D002252 9.9e-06 53.5 68 38.2
Carub.0001s3848 Capsella rubella HOM05D009461 ORTHO05D002252 9.9e-06 53.5 67 38.8
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 9.9e-06 53.5 73 34.2


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