Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 2.1e-86 322.4 171 100.0
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 3.2e-34 149.1 174 55.2
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 2.7e-33 146.0 175 52.0
Migut.C00473 Erythranthe guttata HOM05D005317 ORTHO05D005146 2.0e-28 129.8 163 52.1
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 4.5e-28 128.6 166 50.0
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 4.9e-27 125.2 153 49.0
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 4.2e-26 122.1 143 46.9
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 5.1e-24 115.2 148 49.3
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 1.1e-23 114.0 161 47.2
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 3.3e-23 112.5 167 46.7
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 7.4e-23 111.3 150 46.7
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 6.2e-22 108.2 124 48.4
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 1.4e-21 107.1 160 43.8
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 1.4e-21 107.1 162 42.0
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 4.0e-21 105.5 163 46.0
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 6.9e-21 104.8 160 44.4
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 1.2e-20 104.0 162 44.4
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 1.5e-20 103.6 151 45.0
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 4.5e-20 102.1 122 46.7
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.0e-19 100.9 107 52.3
MSTRG.25022 Avicennia marina HOM05D005317 ORTHO05D005146 1.7e-19 100.1 161 46.0
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 2.9e-19 99.4 149 43.0
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 3.8e-19 99.0 161 45.3
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 4.9e-19 98.6 143 42.0
SGA_v2.0_scaffold238G43910 Striga asiatica HOM05D005317 ORTHO05D005146 6.5e-19 98.2 169 41.4
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 9.3e-18 94.4 151 41.1
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 1.6e-17 93.6 150 38.0
VMungo0647G1960 Vigna mungo HOM05D005317 ORTHO05D005146 1.6e-17 93.6 157 38.2
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 2.7e-17 92.8 148 41.2
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 3.5e-17 92.4 149 42.3
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.5e-17 92.4 158 39.2
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 3.5e-17 92.4 158 39.9
Psat6g017280 Pisum sativum HOM05D005317 ORTHO05D005146 6.0e-17 91.7 136 44.1
PGSC0003DMG400004968 Solanum tuberosum HOM05D005317 ORTHO05D005146 6.0e-17 91.7 166 41.6
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 6.0e-17 91.7 149 43.6
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 7.9e-17 91.3 142 41.5
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 1.0e-16 90.9 178 36.0
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.3e-16 90.5 166 38.0
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 1.3e-16 90.5 150 38.0
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.3e-16 90.5 157 39.5
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 1.3e-16 90.5 143 42.0
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.8e-16 90.1 157 41.4
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.8e-16 90.1 157 38.9
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 2.3e-16 89.7 169 43.2
Lj4g0026806 Lotus japonicus HOM05D005317 ORTHO05D005146 5.1e-16 88.6 174 36.8
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 8.7e-16 87.8 157 36.9
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.5e-15 87.0 147 41.5
Psat0ss26165g0240 Pisum sativum HOM05D005317 ORTHO05D005146 1.5e-15 87.0 174 33.9
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 1.9e-15 86.7 162 37.7
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.3e-15 85.9 147 41.5
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.3e-15 85.9 147 41.5
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 7.4e-15 84.7 159 37.1
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 7.4e-15 84.7 153 38.6
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 9.6e-15 84.3 168 36.3
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 1.3e-14 84.0 148 37.8
FvH4_1g18210 Fragaria vesca HOM05D005317 ORTHO05D005146 1.6e-14 83.6 164 35.4
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 2.1e-14 83.2 153 39.2
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 2.8e-14 82.8 141 38.3
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 2.8e-14 82.8 162 35.8
FAN19G1325 Fragaria x ananassa HOM05D005317 ORTHO05D005146 3.7e-14 82.4 164 34.8
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 3.7e-14 82.4 142 38.0
TPR.G3735 Trifolium pratense HOM05D005317 ORTHO05D005146 3.7e-14 82.4 172 33.7
Lalb_Chr24g0399511 Lupinus albus HOM05D005317 ORTHO05D005146 4.8e-14 82.0 139 40.3
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 4.8e-14 82.0 166 35.5
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 6.2e-14 81.6 114 40.4
Gorai.002G136100 Gossypium raimondii HOM05D005317 ORTHO05D005146 8.2e-14 81.3 142 40.8
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.4e-13 80.5 165 34.5
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 1.8e-13 80.1 147 36.1
Aqoxy6G02509 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 2.4e-13 79.7 99 50.5
FAN26G0581 Fragaria x ananassa HOM05D005317 ORTHO05D005146 2.4e-13 79.7 163 35.0
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 3.1e-13 79.3 149 40.3
Gohir.D01G111432 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.1e-13 79.3 157 33.8
Actinidia16411 Actinidia chinensis HOM05D005317 ORTHO05D005146 4.1e-13 79.0 144 38.2
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 4.1e-13 79.0 169 33.7
FAN23G2069 Fragaria x ananassa HOM05D005317 ORTHO05D005146 5.3e-13 78.6 163 35.0
Glyma.17G158600 Glycine max HOM05D005317 ORTHO05D005146 5.3e-13 78.6 181 30.9
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 6.9e-13 78.2 155 42.6
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 6.9e-13 78.2 153 37.3
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 6.9e-13 78.2 151 35.1
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 9.0e-13 77.8 160 36.9
Dinv23042 Davidia involucrata HOM05D005317 ORTHO05D005146 9.0e-13 77.8 137 36.5
FAN28G2997 Fragaria x ananassa HOM05D005317 ORTHO05D005146 9.0e-13 77.8 163 35.0
Gohir.D05G215300 Gossypium hirsutum HOM05D005317 ORTHO05D005146 9.0e-13 77.8 148 39.9
COL.COLO4_11612 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.5e-12 77.0 152 40.1
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 1.5e-12 77.0 151 34.4
CDE07G0499 Ceratophyllum demersum HOM05D000271 ORTHO05D009467 2.0e-12 76.6 153 34.0
Ciclev10027255m.g Citrus clementina HOM05D005317 ORTHO05D005146 2.6e-12 76.3 154 39.0
Glyma.14G089084 Glycine max HOM05D005317 ORTHO05D005146 2.6e-12 76.3 144 42.4
Glyma.17G232900 Glycine max HOM05D005317 ORTHO05D005146 2.6e-12 76.3 149 43.6
Thecc.08G084600 Theobroma cacao HOM05D005317 ORTHO05D005146 3.4e-12 75.9 166 31.9
Gohir.A01G123550 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.5e-12 75.5 142 39.4
DCAR_009867 Daucus carota HOM05D005317 ORTHO05D005146 5.8e-12 75.1 172 32.6
SGA_v2.0_scaffold15G07499 Striga asiatica HOM05D005317 ORTHO05D005146 7.6e-12 74.7 146 39.0
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 1.3e-11 73.9 145 35.9
Sc24g0002340 Simmondsia chinensis HOM05D005317 ORTHO05D005146 2.2e-11 73.2 156 32.7
Gohir.A05G212000 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.9e-11 72.8 159 35.8
MSTRG.23654 Avicennia marina HOM05D005317 ORTHO05D005146 3.8e-11 72.4 150 36.7
Duzib187G1956 Durio zibethinus HOM05D005317 ORTHO05D005146 5.0e-11 72.0 153 38.6
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.5e-11 71.6 162 38.9
Gorai.009G222000 Gossypium raimondii HOM05D005317 ORTHO05D005146 8.4e-11 71.2 148 34.5
Oeu021452.1 Olea europaea HOM05D005317 ORTHO05D005146 1.4e-10 70.5 149 36.2
CiPaw.07G172100 Carya illinoinensis HOM05D005317 ORTHO05D005146 4.2e-10 68.9 148 40.5
ATR0739G163 Amborella trichopoda HOM05D005317 ORTHO05D005146 5.5e-10 68.6 169 34.3
Ciclev10029376m.g Citrus clementina HOM05D005317 ORTHO05D005146 9.3e-10 67.8 172 37.8
Gohir.D03G030600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.6e-09 67.0 160 36.2
Gohir.D01G111366 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.7e-09 66.2 84 48.8
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 3.5e-09 65.9 160 36.2
Sed0021979 Sechium edule HOM05D005317 ORTHO05D005146 6.1e-09 65.1 140 36.4
CDE04G2604 Ceratophyllum demersum HOM05D000375 ORTHO05D000240 1.0e-08 64.3 170 29.4
arahy.Tifrunner.gnm1.ann1.K9IMQL Arachis hypogaea HOM05D005317 ORTHO05D005146 1.3e-08 63.9 173 35.3
Cfa013738 Carpinus fangiana HOM05D005317 ORTHO05D005146 3.0e-08 62.8 151 32.5
Gohir.A11G212400 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.0e-08 62.8 152 34.2
Gohir.D06G022800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.0e-08 62.8 144 35.4
Gorai.003G032200 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.0e-08 62.8 160 36.2
Phvul.009G074100 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 3.0e-08 62.8 137 33.6
Sc02g0008110 Simmondsia chinensis HOM05D005317 ORTHO05D005146 3.0e-08 62.8 150 36.0
VMungo1309G2313 Vigna mungo HOM05D005317 ORTHO05D005146 3.0e-08 62.8 154 32.5
unitig_749.g13883 Utricularia gibba HOM05D005317 ORTHO05D005146 3.9e-08 62.4 110 38.2
SalBow3G0220 Salvia bowleyana HOM05D005317 ORTHO05D005146 5.1e-08 62.0 146 33.6
TPR.G13134 Trifolium pratense HOM05D014755 ORTHO05D005146 8.7e-08 61.2 158 36.7
ClCG01G017790 Citrullus lanatus HOM05D005317 ORTHO05D005146 1.1e-07 60.8 137 34.3
MBI16_g41241_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 1.5e-07 60.5 143 32.2
CiPaw.07G172000 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.9e-07 60.1 148 35.1
Gorai.010G027400 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.9e-07 60.1 144 34.7
Atru.chr13.869 Acer truncatum HOM05D011270 ORTHO05D012905 2.5e-07 59.7 164 31.1
Actinidia11964 Actinidia chinensis HOM05D031334 ORTHO05D026410 5.7e-07 58.5 141 34.8
arahy.Tifrunner.gnm1.ann1.G8H34X Arachis hypogaea HOM05D005317 ORTHO05D005146 7.4e-07 58.2 96 37.5
Migut.H00325 Erythranthe guttata HOM05D005317 ORTHO05D005146 7.4e-07 58.2 147 33.3
ClCG05G026550 Citrullus lanatus HOM05D029900 ORTHO05D005146 1.6e-06 57.0 144 27.8
Gohir.A06G025700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.6e-06 57.0 147 34.0
Phvul.001G030900 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 2.2e-06 56.6 124 32.3
Glyma.06G048800 Glycine max HOM05D014755 ORTHO05D005146 2.8e-06 56.2 140 31.4
Gorai.007G226200 Gossypium raimondii HOM05D005317 ORTHO05D005146 6.3e-06 55.1 147 33.3
Lj5g0011909 Lotus japonicus HOM05D014755 ORTHO05D005146 8.2e-06 54.7 133 32.3


User provided reference genes

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