Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 0.0e+00 1326.6 753 100.0
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 0.0e+00 1166.8 808 83.9
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 1.1e-267 926.8 819 65.3
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.5e-264 916.4 780 65.4
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 8.0e-263 910.6 805 67.0
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 1.5e-261 906.4 856 62.6
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 9.7e-261 903.7 812 64.3
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 2.8e-260 902.1 744 66.3
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 4.8e-260 901.4 808 62.3
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 8.2e-260 900.6 809 62.8
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 8.2e-260 900.6 838 63.7
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 1.1e-259 900.2 804 66.3
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 2.6e-258 895.6 795 64.0
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 1.0e-257 893.6 755 65.8
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 3.8e-257 891.7 803 63.9
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 6.5e-257 891.0 813 62.2
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 9.4e-256 887.1 808 62.5
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 1.2e-255 886.7 806 64.8
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.2e-255 886.7 821 61.6
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 4.0e-254 881.7 799 62.3
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 5.2e-254 881.3 787 69.1
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 7.5e-253 877.5 840 62.4
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 9.8e-253 877.1 824 63.2
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 1.7e-252 876.3 787 66.8
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 6.3e-252 874.4 799 62.0
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 5.4e-251 871.3 817 62.7
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 2.7e-250 869.0 793 63.7
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 3.5e-250 868.6 799 61.7
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 8.5e-249 864.0 803 63.3
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 2.5e-248 862.4 803 62.4
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 3.2e-248 862.1 790 64.1
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.2e-247 860.1 807 60.0
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 2.7e-247 859.0 821 59.9
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 3.0e-246 855.5 815 60.5
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 1.2e-245 853.6 807 61.5
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 4.4e-245 851.7 796 63.2
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 1.3e-244 850.1 825 58.9
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 2.2e-244 849.4 827 58.2
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 1.4e-243 846.7 811 59.6
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 1.8e-243 846.3 746 65.8
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 2.4e-243 845.9 823 58.6
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 1.0e-241 840.5 808 61.0
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 1.1e-240 837.0 798 60.4
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 1.5e-240 836.6 823 63.3
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 1.5e-240 836.6 834 61.0
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 2.5e-240 835.9 823 58.0
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 3.0e-238 828.9 831 59.7
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 3.4e-237 825.5 752 63.7
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 2.4e-235 819.3 799 58.8
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 2.4e-235 819.3 792 60.7
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 5.4e-235 818.1 820 58.5
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 1.6e-234 816.6 806 58.3
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 4.6e-234 815.1 798 58.8
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 7.8e-234 814.3 776 62.0
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 1.0e-233 813.9 806 59.9
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 1.7e-233 813.1 813 58.9
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 5.6e-232 808.1 798 58.4
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 7.3e-232 807.7 810 58.1
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 9.5e-232 807.4 811 57.6
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 1.6e-231 806.6 769 62.9
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 1.0e-230 803.9 774 61.4
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 2.3e-230 802.7 799 60.5
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 9.8e-229 797.3 795 58.2
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 2.9e-228 795.8 778 58.4
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 2.4e-227 792.7 776 60.4
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 2.0e-226 789.6 821 58.7
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.0e-225 787.3 805 58.1
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 2.3e-225 786.2 754 63.8
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.0e-225 785.8 813 57.8
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 5.0e-225 785.0 811 60.2
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 4.3e-224 781.9 809 57.1
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 8.1e-223 777.7 806 57.4
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 2.3e-222 776.2 800 56.6
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 1.7e-220 770.0 789 57.0
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 2.2e-220 769.6 825 54.9
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 3.7e-220 768.8 709 65.3
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 9.2e-219 764.2 763 60.0
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 3.0e-217 759.2 787 56.4
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.1e-216 757.3 790 56.1
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 2.0e-213 746.5 808 54.0
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 1.3e-212 743.8 796 56.4
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 4.9e-212 741.9 783 55.8
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.5e-205 720.3 884 51.1
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 4.4e-205 718.8 755 56.8
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.3e-200 701.4 810 52.6
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 6.2e-199 698.4 812 52.3
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 5.8e-197 691.8 680 59.6
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 3.9e-193 679.1 815 51.3
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 6.6e-193 678.3 642 60.4
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 5.6e-192 675.2 812 51.7
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 1.5e-189 667.2 816 51.0
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 9.9e-189 664.5 819 50.3
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 4.9e-188 662.1 819 50.2
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 2.4e-187 659.8 812 53.2
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 3.2e-187 659.4 772 51.9
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 1.6e-186 657.1 805 50.6
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 2.8e-183 646.4 807 50.9
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 3.7e-183 646.0 812 50.4
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 4.0e-182 642.5 816 49.5
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 3.8e-180 636.0 752 52.9
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 2.5e-179 633.3 752 52.8
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 4.6e-178 629.0 793 49.9
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 6.0e-178 628.6 752 52.7
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 3.0e-177 626.3 753 51.7
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 7.6e-173 611.7 795 48.6
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 1.7e-172 610.5 812 48.0
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.1e-171 607.8 916 43.7
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 3.3e-168 596.3 634 56.9
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 1.7e-156 557.4 818 43.5
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 4.4e-152 542.7 794 43.2
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 4.1e-150 536.2 585 55.7
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 2.6e-149 533.5 725 46.6
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.8e-145 520.8 440 63.4
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 1.3e-132 478.0 693 44.3
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 2.1e-130 470.7 724 42.5
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 4.0e-129 466.5 467 60.0
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 1.3e-124 451.4 711 42.2
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 5.6e-123 446.0 498 52.8
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.2e-119 434.1 462 58.4
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.4e-118 430.6 834 39.3
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 3.0e-116 423.7 528 50.6
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 1.1e-115 421.8 410 61.7
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 2.3e-113 414.1 887 35.6
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 1.4e-110 404.8 481 51.6
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 4.0e-105 386.7 349 64.5
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 4.4e-96 356.7 284 65.8
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 3.6e-90 337.0 524 43.7
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.2e-88 332.0 281 64.8
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 1.6e-85 321.6 459 42.7
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 2.3e-84 317.8 897 33.0
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 3.9e-84 317.0 808 33.5
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 3.4e-80 303.9 569 38.8
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 7.1e-78 296.2 752 31.6
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 3.5e-77 293.9 446 43.9
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.3e-74 285.4 641 37.3
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 4.3e-59 233.8 355 46.5
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.2e-55 221.5 328 47.6
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.9e-54 218.4 388 41.5
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 1.1e-51 209.1 756 29.0
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 2.6e-48 198.0 241 52.3
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.7e-48 196.4 370 42.2
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 8.5e-39 166.4 134 64.2
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.5e-35 155.6 328 39.9
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.6e-35 154.8 307 43.0
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 3.2e-30 137.9 137 54.7
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 3.0e-28 131.3 136 52.2
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.4e-25 121.7 134 55.2
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 2.5e-22 111.7 217 41.0
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.4e-22 109.8 300 36.3
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.2e-21 109.4 202 45.0
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 6.1e-21 107.1 94 58.5
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.4e-20 105.9 102 55.9
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 3.0e-20 104.8 85 63.5
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.0e-20 104.8 142 45.8
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.4e-19 101.3 247 36.0
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.3e-18 99.4 97 54.6
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.7e-18 97.8 211 37.0
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 8.3e-18 96.7 79 60.8
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.4e-17 95.9 249 35.3
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.6e-16 92.4 155 47.1
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.5e-14 83.2 294 34.7
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.2e-13 82.8 152 42.1
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 8.0e-13 80.1 133 44.4
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.0e-12 77.8 80 53.8
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 3.4e-11 74.7 71 53.5
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 1.1e-09 69.7 113 44.2
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 1.8e-09 68.9 51 70.6
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 7.0e-09 67.0 64 57.8
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 4.5e-08 64.3 65 52.3
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.5e-08 64.3 207 33.8
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 7.8e-08 63.5 42 71.4
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.7e-07 62.4 78 44.9
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 5.0e-07 60.8 85 44.7
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.1e-06 59.7 57 56.1
Lalb_Chr05g0228661 Lupinus albus HOM05D003551 ORTHO05D048508 1.5e-06 59.3 124 37.9


User provided reference genes

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