Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014130.1 Olea europaea HOM05D000213 ORTHO05D291447 3.7e-100 368.2 191 100.0
Oeu019778.1 Olea europaea HOM05D000213 ORTHO05D000985 1.9e-43 179.9 188 58.5
MSTRG.11805 Avicennia marina HOM05D000213 ORTHO05D000985 6.5e-20 101.7 223 39.9
MSTRG.25785 Avicennia marina HOM05D000213 ORTHO05D000985 2.7e-18 96.3 220 39.1
Oeu018563.1 Olea europaea HOM05D000213 ORTHO05D000985 1.4e-17 94.0 239 36.0
Migut.A00430 Erythranthe guttata HOM05D000213 ORTHO05D000985 4.0e-17 92.4 221 38.9
Nitab4.5_0001159g0160 Nicotiana tabacum HOM05D000213 ORTHO05D000985 1.7e-15 87.0 221 35.7
Cc08_g06420 Coffea canephora HOM05D000213 ORTHO05D000985 2.8e-15 86.3 208 37.5
Nitab4.5_0011148g0010 Nicotiana tabacum HOM05D000213 ORTHO05D000985 1.4e-14 84.0 225 35.6
Oeu053855.1 Olea europaea HOM05D000213 ORTHO05D000985 4.1e-14 82.4 227 34.8
Actinidia22258 Actinidia chinensis HOM05D000213 ORTHO05D000985 2.7e-13 79.7 216 35.2
CSS0019338 Camellia sinensis var. sinensis HOM05D000213 ORTHO05D000985 3.5e-13 79.3 221 33.9
CSS0005905 Camellia sinensis var. sinensis HOM05D000213 ORTHO05D000985 4.5e-13 79.0 221 33.9
GSVIVG01033188001 Vitis vinifera HOM05D000213 ORTHO05D000985 1.0e-12 77.8 194 36.1
SGA_v2.0_scaffold193G40666 Striga asiatica HOM05D000213 ORTHO05D000985 1.3e-12 77.4 242 37.2
Peaxi162Scf00459g00841 Petunia axillaris HOM05D000213 ORTHO05D000985 1.1e-11 74.3 199 36.2
HPP92_017132 Vanilla planifolia HOM05D000213 ORTHO05D000985 3.2e-11 72.8 205 32.2
GSVIVG01029265001 Vitis vinifera HOM05D000213 ORTHO05D000985 3.2e-11 72.8 194 34.5
Sed0010336 Sechium edule HOM05D000213 ORTHO05D000985 1.2e-10 70.9 207 34.3
TAR626G0788 Trochodendron aralioides HOM05D000213 ORTHO05D000985 1.2e-10 70.9 223 33.6
MSTRG.1616 Avicennia marina HOM05D000213 ORTHO05D000985 2.1e-10 70.1 219 36.5
Solyc08g006320.4 Solanum lycopersicum HOM05D000213 ORTHO05D000985 3.6e-10 69.3 213 34.3
Eucgr.C04011 Eucalyptus grandis HOM05D000213 ORTHO05D000985 3.0e-09 66.2 190 35.3
MBI14_g34974_MAGBIO Magnolia biondii HOM05D000213 ORTHO05D000985 5.2e-09 65.5 203 33.0
Peaxi162Scf00045g01641 Petunia axillaris HOM05D000213 ORTHO05D000985 8.8e-09 64.7 185 35.7
PGSC0003DMG400009530 Solanum tuberosum HOM05D000213 ORTHO05D000985 8.8e-09 64.7 222 31.5
PGSC0003DMG400029371 Solanum tuberosum HOM05D000213 ORTHO05D000985 8.8e-09 64.7 185 34.6
MBI16_g09342_MAGBIO Magnolia biondii HOM05D000213 ORTHO05D000985 4.4e-08 62.4 216 31.0
Gohir.D07G000300 Gossypium hirsutum HOM05D000213 ORTHO05D000985 5.7e-08 62.0 232 31.0
Sc23g0006100 Simmondsia chinensis HOM05D000213 ORTHO05D000985 5.7e-08 62.0 152 35.5
Duzib168G0527 Durio zibethinus HOM05D000213 ORTHO05D000985 9.8e-08 61.2 220 30.0
MD15G1106600 Malus domestica HOM05D000213 ORTHO05D000985 9.8e-08 61.2 225 32.0
Nitab4.5_0007342g0050 Nicotiana tabacum HOM05D000213 ORTHO05D000985 9.8e-08 61.2 236 31.8
Nitab4.5_0000555g0130 Nicotiana tabacum HOM05D000213 ORTHO05D000985 1.7e-07 60.5 218 30.7
PGR044G1158 Punica granatum HOM05D000213 ORTHO05D000985 1.7e-07 60.5 245 29.4
Nn8g40438 Nelumbo nucifera HOM05D000213 ORTHO05D000985 2.2e-07 60.1 219 32.9
Phvul.009G101900 Phaseolus vulgaris HOM05D000213 ORTHO05D000985 2.8e-07 59.7 195 35.4
Prupe.1G459100 Prunus persica HOM05D000213 ORTHO05D000985 2.8e-07 59.7 226 31.9
Actinidia06429 Actinidia chinensis HOM05D000213 ORTHO05D000985 3.7e-07 59.3 204 34.3
Cpa.g.sc768.1 Carica papaya HOM05D000213 ORTHO05D000985 4.8e-07 58.9 232 31.0
Sed0028224 Sechium edule HOM05D000213 ORTHO05D000985 4.8e-07 58.9 203 32.0
Gohir.D06G107100 Gossypium hirsutum HOM05D000213 ORTHO05D000985 6.3e-07 58.5 230 30.4
HPP92_017398 Vanilla planifolia HOM05D000213 ORTHO05D000985 6.3e-07 58.5 222 27.9
AT4G31550 Arabidopsis thaliana HOM05D000213 ORTHO05D000985 8.3e-07 58.2 217 31.8
Ca_15653_v3 Cicer arietinum L. HOM05D000213 ORTHO05D000985 8.3e-07 58.2 189 34.4
Ca_15661_v3 Cicer arietinum L. HOM05D000213 ORTHO05D000985 8.3e-07 58.2 189 34.4
Sopen08g002300 Solanum pennellii HOM05D000213 ORTHO05D000985 8.3e-07 58.2 179 34.1
BcaB06g27985 Brassica carinata HOM05D000213 ORTHO05D000985 1.1e-06 57.8 220 30.9
ClCG05G026460 Citrullus lanatus HOM05D000213 ORTHO05D000985 1.1e-06 57.8 238 28.6
Glyma.17G197500 Glycine max HOM05D000213 ORTHO05D000985 1.1e-06 57.8 214 32.2
Lj1g0018217 Lotus japonicus HOM05D000213 ORTHO05D000985 1.1e-06 57.8 151 37.7
Potri.018G139300 Populus trichocarpa HOM05D000213 ORTHO05D000985 1.1e-06 57.8 187 29.9
CANSAT25G3190 Cannabis sativa HOM05D000213 ORTHO05D000985 1.4e-06 57.4 233 31.8
Duzib187G0990 Durio zibethinus HOM05D000213 ORTHO05D000985 1.4e-06 57.4 227 29.5
MELO3C003622.2 Cucumis melo HOM05D000213 ORTHO05D000985 1.8e-06 57.0 235 29.4
CsaV3_3G047140 Cucumis sativus L. HOM05D000213 ORTHO05D000985 1.8e-06 57.0 235 29.4
Dinv08675 Davidia involucrata HOM05D000213 ORTHO05D000985 2.4e-06 56.6 229 30.6
Dinv25479 Davidia involucrata HOM05D000213 ORTHO05D000985 2.4e-06 56.6 208 28.4
Gorai.010G121800 Gossypium raimondii HOM05D000213 ORTHO05D000985 2.4e-06 56.6 251 30.7
RcHm_v2.0_Chr6g0305101 Rosa chinensis HOM05D000213 ORTHO05D000985 2.4e-06 56.6 230 30.0
CDE05G1828 Ceratophyllum demersum HOM05D000213 ORTHO05D000985 3.1e-06 56.2 179 31.8
FAN15G1367 Fragaria x ananassa HOM05D000213 ORTHO05D000985 3.1e-06 56.2 224 31.2
THA.LOC104803623 Tarenaya hassleriana HOM05D000213 ORTHO05D000985 3.1e-06 56.2 212 32.1
Gohir.A07G002000 Gossypium hirsutum HOM05D000213 ORTHO05D000985 4.1e-06 55.8 231 30.3
Potri.006G072400 Populus trichocarpa HOM05D000213 ORTHO05D000985 4.1e-06 55.8 187 32.1
Gohir.D05G066100 Gossypium hirsutum HOM05D000213 ORTHO05D000985 5.4e-06 55.5 227 28.6
MD08G1127200 Malus domestica HOM05D000213 ORTHO05D000985 5.4e-06 55.5 234 29.1
Cfa013475 Carpinus fangiana HOM05D000213 ORTHO05D000985 7.0e-06 55.1 171 31.6
Haze_22053 Corylus avellana HOM05D000213 ORTHO05D000985 7.0e-06 55.1 171 32.7
Lj6g0013067 Lotus japonicus HOM05D000213 ORTHO05D000985 7.0e-06 55.1 136 39.0
VMungo1309G0902 Vigna mungo HOM05D000213 ORTHO05D000985 7.0e-06 55.1 193 31.1
COL.COLO4_19021 Corchorus olitorius HOM05D000213 ORTHO05D000985 9.1e-06 54.7 224 30.4
Manes.16G134800 Manihot esculenta HOM05D000213 ORTHO05D000985 9.1e-06 54.7 234 29.9


User provided reference genes

Program Settings