Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014066.1 Olea europaea HOM05D006039 ORTHO05D006797 4.5e-209 731.1 393 100.0
Nitab4.5_0000175g0040 Nicotiana tabacum HOM05D006039 ORTHO05D006797 1.5e-116 423.7 399 61.9
Solyc11g056640.3 Solanum lycopersicum HOM05D006039 ORTHO05D006797 9.3e-114 414.5 397 59.4
Dinv36292 Davidia involucrata HOM05D006039 ORTHO05D006797 2.5e-111 406.4 422 59.2
Nitab4.5_0002278g0050 Nicotiana tabacum HOM05D006039 ORTHO05D006797 3.3e-111 406.0 399 59.6
Peaxi162Scf00839g00234 Petunia axillaris HOM05D006039 ORTHO05D006797 9.1e-109 397.9 386 60.6
SalBow4G0075 Salvia bowleyana HOM05D006039 ORTHO05D006797 6.5e-107 391.7 420 58.1
SalBow4G2759 Salvia bowleyana HOM05D006039 ORTHO05D006797 6.5e-107 391.7 420 58.1
MSTRG.12478 Avicennia marina HOM05D006039 ORTHO05D006797 1.1e-106 391.0 410 56.3
MSTRG.17577 Avicennia marina HOM05D006039 ORTHO05D006797 5.5e-106 388.7 438 54.8
CSS0020882 Camellia sinensis var. sinensis HOM05D006039 ORTHO05D006797 2.8e-102 376.3 422 56.2
CSS0048119 Camellia sinensis var. sinensis HOM05D006039 ORTHO05D006797 6.3e-102 375.2 421 56.1
Cc01_g04400 Coffea canephora HOM05D006039 ORTHO05D006797 9.1e-101 371.3 405 55.1
Migut.N02301 Erythranthe guttata HOM05D006039 ORTHO05D006797 2.5e-98 363.2 416 56.5
Actinidia06328 Actinidia chinensis HOM05D006039 ORTHO05D006797 4.2e-98 362.5 394 56.3
SGA_v2.0_scaffold247G44833 Striga asiatica HOM05D006039 ORTHO05D006797 3.9e-96 355.9 427 52.7
Migut.D00567 Erythranthe guttata HOM05D006039 ORTHO05D006797 2.2e-94 350.1 404 54.7
Lj1C361T2 Lonicera japonica HOM05D006039 ORTHO05D006797 2.4e-93 346.7 426 52.3
TWI32G0154 Tripterygium wilfordii HOM05D006039 ORTHO05D006797 3.2e-90 336.3 419 52.0
Rhsim01G0190000 Rhododendron simsii HOM05D006039 ORTHO05D006797 5.5e-90 335.5 421 50.8
Sc16g0011650 Simmondsia chinensis HOM05D006039 ORTHO05D006797 3.6e-89 332.8 421 50.1
Aqoxy3G00443 Aquilegia oxysepala HOM05D006039 ORTHO05D006797 1.0e-88 331.3 421 47.3
TAR623G0385 Trochodendron aralioides HOM05D006039 ORTHO05D006797 1.0e-88 331.3 418 50.7
Atru.chr3.2554 Acer truncatum HOM05D006039 ORTHO05D006797 1.8e-88 330.5 430 51.2
vmacro12713 Vaccinium macrocarpon HOM05D006039 ORTHO05D006797 5.2e-88 328.9 390 53.8
QL01p005703 Quercus lobata HOM05D006039 ORTHO05D006797 1.5e-87 327.4 441 49.2
Duzib168G2100 Durio zibethinus HOM05D006039 ORTHO05D006797 8.2e-86 321.6 416 49.8
GSVIVG01025314001 Vitis vinifera HOM05D006039 ORTHO05D006797 8.2e-86 321.6 360 55.3
Potri.003G207400 Populus trichocarpa HOM05D006039 ORTHO05D006797 3.1e-85 319.7 425 47.3
Thecc.09G226300 Theobroma cacao HOM05D006039 ORTHO05D006797 4.1e-85 319.3 417 48.9
ClCG02G023440 Citrullus lanatus HOM05D006039 ORTHO05D006797 7.0e-85 318.5 420 48.3
Sabra01G0012000 Salix brachista HOM05D006039 ORTHO05D006797 7.0e-85 318.5 426 46.9
MBI01_g36435_MAGBIO Magnolia biondii HOM05D006039 ORTHO05D006797 1.2e-84 317.8 425 48.0
Prupe.6G022100 Prunus persica HOM05D006039 ORTHO05D006797 1.0e-83 314.7 389 51.4
ECA233G1597 Erigeron canadensis HOM05D006039 ORTHO05D006797 1.7e-83 313.9 407 49.6
CANSAT54G2219 Cannabis sativa HOM05D006039 ORTHO05D006797 3.8e-83 312.8 417 49.4
HanXRQChr13g0403991 Helianthus annuus HOM05D006039 ORTHO05D006797 3.8e-83 312.8 393 50.1
CiPaw.14G122300 Carya illinoinensis HOM05D006039 ORTHO05D006797 2.5e-82 310.1 363 54.8
Potri.001G017100 Populus trichocarpa HOM05D006039 ORTHO05D006797 2.5e-82 310.1 423 46.8
Eucgr.B03667 Eucalyptus grandis HOM05D006039 ORTHO05D006797 2.7e-81 306.6 426 46.5
Haze_23073 Corylus avellana HOM05D006039 ORTHO05D006797 3.6e-81 306.2 433 49.4
Sed0010144 Sechium edule HOM05D006039 ORTHO05D006797 4.7e-81 305.8 383 50.1
Manes.14G013400 Manihot esculenta HOM05D006039 ORTHO05D006797 2.3e-80 303.5 422 46.9
CsaV3_4G024070 Cucumis sativus L. HOM05D006039 ORTHO05D006797 3.0e-80 303.1 387 48.8
Duzib150G0354 Durio zibethinus HOM05D006039 ORTHO05D006797 8.8e-80 301.6 395 49.1
Lsat_1_v5_gn_1_67181 Lactuca sativa HOM05D006039 ORTHO05D006797 1.5e-79 300.8 416 46.4
COL.COLO4_24829 Corchorus olitorius HOM05D006039 ORTHO05D006797 3.4e-79 299.7 409 47.4
MELO3C014616.2 Cucumis melo HOM05D006039 ORTHO05D006797 7.5e-79 298.5 406 48.0
Lj3g0020392 Lotus japonicus HOM05D006039 ORTHO05D006797 2.2e-78 297.0 409 47.9
Ciclev10014934m.g Citrus clementina HOM05D006039 ORTHO05D006797 1.1e-77 294.7 471 44.4
Manes.06G167800 Manihot esculenta HOM05D006039 ORTHO05D006797 1.1e-77 294.7 415 46.7
Glyma.15G032500 Glycine max HOM05D006039 ORTHO05D006797 1.4e-77 294.3 412 49.0
DCAR_002046 Daucus carota HOM05D006039 ORTHO05D006797 1.8e-77 293.9 453 45.9
Gohir.A13G216000 Gossypium hirsutum HOM05D006039 ORTHO05D006797 1.2e-76 291.2 366 52.5
PSO339G2813 Papaver somniferum HOM05D006039 ORTHO05D006797 2.0e-76 290.4 426 46.0
Ah.06g193560 Amaranthus hybridus HOM05D006039 ORTHO05D006797 5.9e-76 288.9 439 44.9
MD11G1028000 Malus domestica HOM05D006039 ORTHO05D006797 5.9e-76 288.9 388 48.2
Nn7g36093 Nelumbo nucifera HOM05D006039 ORTHO05D006797 1.0e-75 288.1 413 44.8
PSO384G3161 Papaver somniferum HOM05D006039 ORTHO05D006797 6.5e-75 285.4 426 45.5
Lalb_Chr22g0352291 Lupinus albus HOM05D006039 ORTHO05D006797 3.2e-74 283.1 413 46.2
Glyma.13G341800 Glycine max HOM05D006039 ORTHO05D006797 2.1e-73 280.4 413 46.7
Cpa.g.sc84.90 Carica papaya HOM05D006039 ORTHO05D006797 6.1e-73 278.9 420 45.0
Psat5g288280 Pisum sativum HOM05D006039 ORTHO05D006797 8.0e-73 278.5 476 41.6
Gohir.D13G219700 Gossypium hirsutum HOM05D006039 ORTHO05D006797 1.0e-72 278.1 368 50.5
VMungo1080G1590 Vigna mungo HOM05D006039 ORTHO05D006797 1.0e-72 278.1 415 46.7
Medtr2g098330 Medicago truncatula HOM05D006039 ORTHO05D006797 1.8e-72 277.3 428 45.1
RcHm_v2.0_Chr5g0077351 Rosa chinensis HOM05D006039 ORTHO05D006797 2.3e-72 276.9 416 46.4
EL10Ac4g10308 Beta vulgaris HOM05D006039 ORTHO05D006797 1.2e-71 274.6 436 44.3
Phvul.L011043 Phaseolus vulgaris HOM05D006039 ORTHO05D006797 4.9e-70 269.2 382 49.7
Lalb_Chr24g0396971 Lupinus albus HOM05D006039 ORTHO05D006797 8.3e-70 268.5 396 46.5
arahy.Tifrunner.gnm1.ann1.CQR7QS Arachis hypogaea HOM05D006039 ORTHO05D006797 4.5e-68 262.7 420 45.5
FAN21G1726 Fragaria x ananassa HOM05D006039 ORTHO05D006797 1.5e-66 257.7 390 45.1
FAN11G0272 Fragaria x ananassa HOM05D006039 ORTHO05D006797 5.6e-66 255.8 384 45.6
PGR102G2927 Punica granatum HOM05D006039 ORTHO05D006797 1.6e-65 254.2 421 44.2
FAN25G3739 Fragaria x ananassa HOM05D006039 ORTHO05D006797 2.8e-65 253.4 389 45.0
THA.LOC104804971 Tarenaya hassleriana HOM05D006039 ORTHO05D006797 6.1e-65 252.3 438 43.2
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 5.2e-64 249.2 415 41.4
CARHR200520 Cardamine hirsuta HOM05D006039 ORTHO05D006797 6.8e-64 248.8 410 41.2
AL6G23500 Arabidopsis lyrata HOM05D006039 ORTHO05D006797 2.2e-62 243.8 411 41.8
arahy.Tifrunner.gnm1.ann1.IJ2E5N Arachis hypogaea HOM05D006039 ORTHO05D006797 4.9e-62 242.7 392 45.9
AUR62019256 Chenopodium quinoa HOM05D006039 ORTHO05D006797 6.4e-62 242.3 441 40.8
Sp6g31030 Schrenkiella parvula HOM05D006039 ORTHO05D006797 9.2e-61 238.4 363 43.8
TAR636G1066 Trochodendron aralioides HOM05D004785 ORTHO05D005704 1.2e-60 238.0 341 45.5
Nn2g15509 Nelumbo nucifera HOM05D006039 ORTHO05D006797 1.0e-59 235.0 341 44.3
AT5G12930 Arabidopsis thaliana HOM05D006039 ORTHO05D006797 3.9e-59 233.0 360 44.2
Cfa009721 Carpinus fangiana HOM05D006039 ORTHO05D006797 3.9e-59 233.0 283 53.4
AUR62005725 Chenopodium quinoa HOM05D006039 ORTHO05D006797 4.3e-58 229.6 436 39.0
Thhalv10013519m.g Eutrema salsugineum HOM05D006039 ORTHO05D006797 7.3e-58 228.8 407 39.6
THA.LOC104799094 Tarenaya hassleriana HOM05D006039 ORTHO05D006797 4.7e-57 226.1 432 38.0
Carub.0006s1111 Capsella rubella HOM05D006039 ORTHO05D006797 1.8e-56 224.2 417 41.2
BcaNung03603 Brassica carinata HOM05D006039 ORTHO05D006797 7.5e-55 218.8 383 39.7
Os09g0488600 Oryza sativa ssp. japonica HOM05D006039 ORTHO05D006797 9.8e-55 218.4 428 41.1
BolC3t13172H Brassica oleracea HOM05D006039 ORTHO05D006797 2.2e-54 217.2 411 39.9
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 6.4e-54 215.7 392 40.3
FAN16G1487 Fragaria x ananassa HOM05D006039 ORTHO05D006797 6.4e-54 215.7 355 43.7
A02p01580 Brassica napus HOM05D006039 ORTHO05D006797 2.4e-53 213.8 401 38.9
HPP92_015767 Vanilla planifolia HOM05D006039 ORTHO05D006797 3.2e-53 213.4 424 40.3
Ca_01279_v3 Cicer arietinum L. HOM05D006039 ORTHO05D006797 9.2e-53 211.8 338 43.2
BraA03t09909Z Brassica rapa HOM05D006039 ORTHO05D006797 2.3e-51 207.2 359 40.9
Potri.003G207500 Populus trichocarpa HOM05D006039 ORTHO05D006797 3.9e-51 206.5 391 40.9
BcaNung01186 Brassica carinata HOM05D006039 ORTHO05D006797 1.1e-50 204.9 353 39.1
BolC2t06525H Brassica oleracea HOM05D006039 ORTHO05D006797 1.1e-50 204.9 353 39.1
BraA02t05138Z Brassica rapa HOM05D006039 ORTHO05D006797 1.5e-50 204.5 402 37.6
A03p05700 Brassica napus HOM05D006039 ORTHO05D006797 6.2e-49 199.1 411 37.7
Sabra03G0153000 Salix brachista HOM05D006039 ORTHO05D006797 1.8e-48 197.6 395 39.0
C03p06660 Brassica napus HOM05D006039 ORTHO05D006797 2.0e-47 194.1 343 41.1
C02p05800 Brassica napus HOM05D006039 ORTHO05D006797 5.8e-47 192.6 351 38.5
Hund07543 Selenicereus undatus HOM05D006039 ORTHO05D006797 1.3e-46 191.4 249 47.4
ATR0815G050 Amborella trichopoda HOM05D006039 ORTHO05D006797 3.2e-45 186.8 313 43.1
AUR62043683 Chenopodium quinoa HOM05D006039 ORTHO05D006797 9.2e-45 185.3 315 45.1
Haze_23656 Corylus avellana HOM05D006039 ORTHO05D006797 2.1e-44 184.1 333 42.9
Haze_23653 Corylus avellana HOM05D006039 ORTHO05D006797 8.6e-43 178.7 253 47.4
Haze_23654 Corylus avellana HOM05D006039 ORTHO05D006797 1.1e-42 178.3 209 54.1
BcaB01g05389 Brassica carinata HOM05D006039 ORTHO05D006797 1.5e-42 177.9 338 39.6
CDE06G0903 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 2.4e-40 170.6 156 60.3
FvH4_3g43290 Fragaria vesca HOM05D006039 ORTHO05D006797 2.4e-40 170.6 300 41.7
Haze_23655 Corylus avellana HOM05D006039 ORTHO05D006797 6.8e-40 169.1 273 45.8
Haze_23701 Corylus avellana HOM05D006039 ORTHO05D006797 2.0e-39 167.5 273 46.9
TPR.G6898 Trifolium pratense HOM05D006039 ORTHO05D006797 2.6e-39 167.2 323 40.2
Zm00001eb101890 Zea mays HOM05D006039 ORTHO05D006797 3.8e-38 163.3 272 41.5
Cfa009719 Carpinus fangiana HOM05D006039 ORTHO05D006797 1.0e-35 155.2 225 49.3
Haze_23698 Corylus avellana HOM05D006039 ORTHO05D006797 1.3e-30 138.3 193 46.6
Actinidia39388 Actinidia chinensis HOM05D006039 ORTHO05D006797 1.0e-27 128.6 207 42.5
Haze_23699 Corylus avellana HOM05D006039 ORTHO05D006797 1.7e-27 127.9 152 52.0
Hund07487 Selenicereus undatus HOM05D000288 ORTHO05D006797 1.7e-27 127.9 189 50.3
AUR62043578 Chenopodium quinoa HOM05D006039 ORTHO05D006797 3.9e-27 126.7 241 36.1
Hund07491 Selenicereus undatus HOM05D006039 ORTHO05D006797 1.5e-26 124.8 165 54.5
MELO3C003056.2 Cucumis melo HOM05D006039 ORTHO05D006797 6.2e-25 119.4 111 57.7
AUR62000084 Chenopodium quinoa HOM05D006039 ORTHO05D000067 4.5e-23 113.2 118 55.9
SHI30498 Sapria himalayana HOM05D006039 ORTHO05D000001 7.9e-20 102.4 441 26.3
AUR62014261 Chenopodium quinoa HOM05D006039 ORTHO05D006797 3.0e-19 100.5 175 41.1
TPR.G377 Trifolium pratense HOM05D006039 ORTHO05D006797 5.6e-18 96.3 90 63.3
Lsat_1_v5_gn_1_67161 Lactuca sativa HOM05D006039 ORTHO05D006797 2.1e-17 94.4 86 60.5
Pp3c16_7650 Physcomitrium patens HOM05D026113 ORTHO05D006797 4.3e-10 70.1 173 32.4
SEGI_29391 Sequoiadendron giganteum HOM05D022188 ORTHO05D006797 5.6e-10 69.7 283 24.4
Pp3c6_9630 Physcomitrium patens HOM05D026113 ORTHO05D006797 2.8e-09 67.4 139 38.1
Pp3c20_22990 Physcomitrium patens HOM05D022188 ORTHO05D006797 2.6e-07 60.8 94 40.4


User provided reference genes

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