Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 1.8e-107 392.5 190 100.0
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 2.6e-69 265.8 190 68.4
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.7e-68 263.1 190 66.3
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 8.4e-68 260.8 190 65.3
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 3.2e-67 258.8 190 66.3
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 5.4e-67 258.1 190 65.3
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.7e-66 255.8 193 64.8
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 5.1e-65 251.5 193 64.8
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.1e-65 251.5 193 64.8
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 6.6e-65 251.1 192 64.1
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.9e-64 249.6 189 65.1
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 5.6e-64 248.1 202 63.4
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 2.1e-63 246.1 191 63.9
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 3.6e-63 245.4 188 63.3
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 3.6e-63 245.4 193 63.7
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 8.1e-63 244.2 198 62.1
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 2.4e-62 242.7 189 62.4
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 3.1e-62 242.3 160 72.5
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 3.1e-62 242.3 192 62.5
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 6.8e-62 241.1 191 62.8
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 8.9e-62 240.7 194 62.4
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 2.2e-60 236.1 194 60.8
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 3.8e-60 235.3 191 62.3
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 4.9e-60 235.0 186 62.4
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 1.4e-59 233.4 191 63.9
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 1.9e-59 233.0 191 63.9
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 2.4e-59 232.6 192 61.5
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 2.4e-59 232.6 193 61.1
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 3.2e-59 232.3 189 60.8
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.3e-59 230.7 189 61.4
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 1.6e-58 229.9 181 63.0
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 3.5e-58 228.8 191 60.7
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 3.5e-58 228.8 187 63.6
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 7.8e-58 227.6 175 66.3
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.3e-57 226.9 195 57.9
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.7e-57 226.5 187 62.6
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.3e-57 226.1 145 73.1
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 5.1e-57 224.9 255 47.5
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 6.6e-57 224.6 191 59.7
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 8.7e-57 224.2 195 58.5
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-56 223.8 191 59.2
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-56 223.8 145 71.7
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.9e-56 223.0 193 60.1
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.9e-56 223.0 194 58.2
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 1.9e-56 223.0 191 61.8
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 2.5e-56 222.6 194 59.3
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 3.3e-56 222.2 188 60.1
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 4.3e-56 221.9 192 56.2
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 4.3e-56 221.9 182 59.3
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 7.3e-56 221.1 182 58.8
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.6e-56 220.7 189 58.7
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.6e-56 220.7 189 58.7
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.3e-55 220.3 195 61.5
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.3e-55 220.3 185 62.7
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 1.3e-55 220.3 192 58.9
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 2.8e-55 219.2 190 57.9
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 2.8e-55 219.2 183 60.7
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 3.6e-55 218.8 143 72.7
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 3.6e-55 218.8 191 58.1
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 4.8e-55 218.4 172 65.7
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 8.1e-55 217.6 189 58.2
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 2.4e-54 216.1 192 57.3
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 2.4e-54 216.1 166 63.3
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 5.3e-54 214.9 190 58.9
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 5.3e-54 214.9 133 75.2
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 5.3e-54 214.9 181 60.2
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 6.9e-54 214.5 192 57.3
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 6.9e-54 214.5 132 77.3
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 2.6e-53 212.6 188 55.3
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.6e-53 212.6 162 64.2
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 3.4e-53 212.2 162 64.2
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 4.4e-53 211.8 180 61.1
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 7.6e-53 211.1 141 70.2
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 2.9e-52 209.1 189 54.0
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 3.8e-52 208.8 175 57.1
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.4e-51 206.8 218 52.8
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 1.9e-51 206.5 191 53.4
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 2.4e-51 206.1 191 54.5
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 5.4e-51 204.9 160 65.0
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 6.0e-50 201.4 168 61.3
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 7.9e-50 201.1 147 63.3
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 6.6e-49 198.0 179 55.3
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.5e-48 196.8 135 69.6
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 1.9e-48 196.4 153 60.1
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 7.3e-48 194.5 132 72.0
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 9.6e-48 194.1 190 52.1
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 2.8e-47 192.6 123 70.7
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 2.4e-46 189.5 138 65.9
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 3.1e-46 189.1 140 64.3
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 9.0e-46 187.6 132 65.2
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.5e-45 186.8 183 54.6
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 1.3e-44 183.7 192 52.6
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.4e-43 180.3 145 61.4
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 3.2e-43 179.1 180 49.4
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.2e-37 160.6 208 44.2
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 5.8e-37 158.3 132 56.8
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.7e-36 156.8 132 59.8
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 4.2e-35 152.1 118 63.6
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.3e-33 147.1 124 56.5
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 8.7e-33 144.4 116 62.9
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.1e-32 144.1 150 53.3
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 3.7e-31 139.0 112 58.0
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 9.0e-30 134.4 86 72.1
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 5.9e-29 131.7 140 53.6
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 5.9e-29 131.7 145 43.4
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 5.9e-29 131.7 86 70.9
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 6.5e-28 128.3 85 69.4
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 1.9e-27 126.7 105 61.0
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.2e-26 124.0 90 70.0
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 6.1e-26 121.7 104 57.7
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.3e-25 120.6 134 50.0
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 3.9e-25 119.0 86 64.0
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 4.3e-24 115.5 150 46.7
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 1.3e-23 114.0 96 61.5
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.3e-20 104.0 139 44.6
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 8.5e-20 101.3 101 50.5
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 3.1e-14 82.8 69 59.4
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 1.5e-13 80.5 88 44.3
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 1.5e-13 80.5 87 46.0
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 5.0e-12 75.5 81 40.7
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 8.5e-12 74.7 138 33.3
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 2.3e-09 66.6 63 46.0
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 3.9e-09 65.9 60 58.3
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 5.1e-09 65.5 54 57.4
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 4.4e-08 62.4 86 32.6
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 4.4e-08 62.4 148 29.7


User provided reference genes

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