Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014013.2 Olea europaea HOM05D004760 ORTHO05D006114 3.2e-72 275.0 141 100.0
Oeu013537.1 Olea europaea HOM05D004760 ORTHO05D006114 4.2e-64 248.1 140 90.7
Ciclev10002842m.g Citrus clementina HOM05D004760 ORTHO05D006114 1.0e-54 216.9 123 88.6
Atru.chr10.822 Acer truncatum HOM05D004760 ORTHO05D006114 3.0e-54 215.3 123 87.0
Atru.chr10.811 Acer truncatum HOM05D004760 ORTHO05D006114 6.7e-54 214.2 123 86.2
MSTRG.22442 Avicennia marina HOM05D004760 ORTHO05D006114 6.7e-54 214.2 141 79.4
ClCG02G021440 Citrullus lanatus HOM05D004760 ORTHO05D006114 6.7e-54 214.2 128 83.6
Duzib150G1663 Durio zibethinus HOM05D004760 ORTHO05D006114 6.7e-54 214.2 127 86.6
Migut.D02262 Erythranthe guttata HOM05D004760 ORTHO05D006114 6.7e-54 214.2 141 78.0
COL.COLO4_03696 Corchorus olitorius HOM05D004760 ORTHO05D006114 1.1e-53 213.4 127 84.3
Thecc.09G348500 Theobroma cacao HOM05D004760 ORTHO05D006114 2.5e-53 212.2 127 82.7
Gohir.A03G030600 Gossypium hirsutum HOM05D004760 ORTHO05D006114 5.6e-53 211.1 123 85.4
SalBow3G2862 Salvia bowleyana HOM05D004760 ORTHO05D006114 9.6e-53 210.3 134 80.6
CANSAT80G1575 Cannabis sativa HOM05D004760 ORTHO05D006114 1.3e-52 209.9 118 88.1
CAN.G546.10 Capsicum annuum HOM05D004760 ORTHO05D006114 2.1e-52 209.1 123 84.6
Dinv29358 Davidia involucrata HOM05D004760 ORTHO05D006114 2.1e-52 209.1 123 85.4
Rhsim01G0212000 Rhododendron simsii HOM05D004760 ORTHO05D006114 2.1e-52 209.1 127 82.7
Cfa010341 Carpinus fangiana HOM05D004760 ORTHO05D006114 3.6e-52 208.4 122 86.1
Gohir.D03G137800 Gossypium hirsutum HOM05D004760 ORTHO05D006114 4.8e-52 208.0 117 88.0
Gorai.003G144700 Gossypium raimondii HOM05D004760 ORTHO05D006114 4.8e-52 208.0 117 88.0
TWI79G1159 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 4.8e-52 208.0 123 83.7
CSS0038756 Camellia sinensis var. sinensis HOM05D004760 ORTHO05D006114 6.2e-52 207.6 127 85.8
CsaV3_4G002110 Cucumis sativus L. HOM05D004760 ORTHO05D006114 6.2e-52 207.6 123 82.9
Manes.15G173300 Manihot esculenta HOM05D004760 ORTHO05D006114 6.2e-52 207.6 123 84.6
QL01p015831 Quercus lobata HOM05D004760 ORTHO05D006114 6.2e-52 207.6 123 83.7
vmacro14407 Vaccinium macrocarpon HOM05D004760 ORTHO05D006114 6.2e-52 207.6 117 88.9
MELO3C033128.2 Cucumis melo HOM05D004760 ORTHO05D006114 8.1e-52 207.2 118 86.4
Haze_23747 Corylus avellana HOM05D004760 ORTHO05D006114 1.1e-51 206.8 122 85.2
Cpa.g.sc94.2 Carica papaya HOM05D004760 ORTHO05D006114 1.4e-51 206.5 118 86.4
Sopen11g027800 Solanum pennellii HOM05D004760 ORTHO05D006114 1.4e-51 206.5 123 84.6
Potri.004G214400 Populus trichocarpa HOM05D004760 ORTHO05D006114 2.4e-51 205.7 128 81.2
GSVIVG01031504001 Vitis vinifera HOM05D004760 ORTHO05D006114 2.4e-51 205.7 122 82.0
PGSC0003DMG400008118 Solanum tuberosum HOM05D004760 ORTHO05D006114 3.1e-51 205.3 123 83.7
Aqoxy1G01159 Aquilegia oxysepala HOM05D004760 ORTHO05D006114 4.0e-51 204.9 123 82.9
PGSC0003DMG400008071 Solanum tuberosum HOM05D004760 ORTHO05D006114 4.0e-51 204.9 122 83.6
PGSC0003DMG400008072 Solanum tuberosum HOM05D004760 ORTHO05D006114 4.0e-51 204.9 123 83.7
Manes.04G015300 Manihot esculenta HOM05D004760 ORTHO05D006114 5.3e-51 204.5 123 82.1
TAR636G2244 Trochodendron aralioides HOM05D004760 ORTHO05D006114 6.9e-51 204.1 118 86.4
Sed0008060 Sechium edule HOM05D004760 ORTHO05D006114 1.2e-50 203.4 141 72.3
CiPaw.14G087800 Carya illinoinensis HOM05D004760 ORTHO05D006114 1.5e-50 203.0 117 85.5
FAN11G0015 Fragaria x ananassa HOM05D004760 ORTHO05D006114 2.0e-50 202.6 126 79.4
DCAR_013702 Daucus carota HOM05D004760 ORTHO05D006114 2.6e-50 202.2 125 83.2
Prupe.6G108700 Prunus persica HOM05D004760 ORTHO05D006114 2.6e-50 202.2 127 78.7
THA.LOC104810873 Tarenaya hassleriana HOM05D004760 ORTHO05D006114 2.6e-50 202.2 134 75.4
Eucgr.C00623 Eucalyptus grandis HOM05D004760 ORTHO05D006114 4.5e-50 201.4 117 86.3
FAN21G0726 Fragaria x ananassa HOM05D004760 ORTHO05D006114 7.6e-50 200.7 123 81.3
Lsat_1_v5_gn_2_99521 Lactuca sativa HOM05D004760 ORTHO05D006114 9.9e-50 200.3 127 79.5
PGR083G1146 Punica granatum HOM05D004760 ORTHO05D006114 1.3e-49 199.9 123 82.9
FAN25G2761 Fragaria x ananassa HOM05D004760 ORTHO05D006114 1.7e-49 199.5 123 80.5
Hund01473 Selenicereus undatus HOM05D004760 ORTHO05D006114 1.7e-49 199.5 123 79.7
Lj1C207G1 Lonicera japonica HOM05D000681 ORTHO05D003832 2.9e-49 198.7 118 83.9
arahy.Tifrunner.gnm1.ann1.TWBW4W Arachis hypogaea HOM05D004760 ORTHO05D006114 3.8e-49 198.4 125 80.8
Cc01_g10530 Coffea canephora HOM05D004760 ORTHO05D006114 3.8e-49 198.4 130 78.5
PGSC0003DMG400005521 Solanum tuberosum HOM05D004760 ORTHO05D006114 3.8e-49 198.4 122 82.0
TWI31G0427 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 3.8e-49 198.4 126 77.8
arahy.Tifrunner.gnm1.ann1.HQ4852 Arachis hypogaea HOM05D004760 ORTHO05D006114 4.9e-49 198.0 125 80.0
Nitab4.5_0002033g0060 Nicotiana tabacum HOM05D004760 ORTHO05D006114 4.9e-49 198.0 131 79.4
ECA233G3649 Erigeron canadensis HOM05D004760 ORTHO05D006114 8.4e-49 197.2 120 81.7
arahy.Tifrunner.gnm1.ann1.KI0H1T Arachis hypogaea HOM05D004760 ORTHO05D006114 1.1e-48 196.8 125 80.0
Sc06g0010990 Simmondsia chinensis HOM05D004760 ORTHO05D006114 1.1e-48 196.8 122 79.5
Sc06g0010910 Simmondsia chinensis HOM05D004760 ORTHO05D006114 1.4e-48 196.4 122 79.5
Lj3g0014185 Lotus japonicus HOM05D004760 ORTHO05D006114 2.4e-48 195.7 123 77.2
MD00G1033500 Malus domestica HOM05D004760 ORTHO05D006114 2.4e-48 195.7 123 80.5
unitig_21.g20191 Utricularia gibba HOM05D001235 ORTHO05D005684 4.2e-48 194.9 123 76.4
Sabra04G0145500 Salix brachista HOM05D004760 ORTHO05D006114 5.5e-48 194.5 130 76.2
SGA_v2.0_scaffold263G45970 Striga asiatica HOM05D004760 ORTHO05D006114 7.1e-48 194.1 116 84.5
A06p21630 Brassica napus HOM05D004760 ORTHO05D006114 9.3e-48 193.7 140 70.0
BraA06t25253Z Brassica rapa HOM05D004760 ORTHO05D006114 9.3e-48 193.7 140 70.0
AUR62034436 Chenopodium quinoa HOM05D004760 ORTHO05D006114 9.3e-48 193.7 119 79.0
Sp5g16240 Schrenkiella parvula HOM05D004760 ORTHO05D006114 9.3e-48 193.7 117 80.3
BcaC01g02002 Brassica carinata HOM05D004760 ORTHO05D006114 1.2e-47 193.4 117 79.5
C03p69650 Brassica napus HOM05D004760 ORTHO05D006114 1.2e-47 193.4 117 79.5
BolC3t19223H Brassica oleracea HOM05D004760 ORTHO05D006114 1.2e-47 193.4 117 79.5
Thhalv10002715m.g Eutrema salsugineum HOM05D004760 ORTHO05D006114 2.1e-47 192.6 117 79.5
PGSC0003DMG400035806 Solanum tuberosum HOM05D004760 ORTHO05D006114 2.1e-47 192.6 123 79.7
AT3G45020 Arabidopsis thaliana HOM05D004760 ORTHO05D006114 3.5e-47 191.8 116 80.2
CARHR150950 Cardamine hirsuta HOM05D004760 ORTHO05D006114 6.0e-47 191.0 138 68.8
AUR62014927 Chenopodium quinoa HOM05D004760 ORTHO05D006114 6.0e-47 191.0 115 80.9
Carub.0005s1081 Capsella rubella HOM05D004760 ORTHO05D006114 7.9e-47 190.7 114 81.6
BcaB01g01128 Brassica carinata HOM05D004760 ORTHO05D006114 1.0e-46 190.3 117 77.8
AL5G23480 Arabidopsis lyrata HOM05D004760 ORTHO05D006114 1.3e-46 189.9 116 78.4
arahy.Tifrunner.gnm1.ann1.DTBR3Z Arachis hypogaea HOM05D004760 ORTHO05D006114 1.3e-46 189.9 125 76.8
Glyma.03G099400 Glycine max HOM05D004760 ORTHO05D006114 1.8e-46 189.5 124 73.4
Ah.15g090630 Amaranthus hybridus HOM05D004760 ORTHO05D006114 2.3e-46 189.1 121 76.0
Actinidia07172 Actinidia chinensis HOM05D004760 ORTHO05D006114 6.7e-46 187.6 105 89.5
Aa31LG4G14120 Aethionema arabicum HOM05D004760 ORTHO05D006114 6.7e-46 187.6 118 76.3
Lalb_Chr01g0004501 Lupinus albus HOM05D004760 ORTHO05D006114 1.1e-45 186.8 117 81.2
Rhsim13G0099000 Rhododendron simsii HOM05D004760 ORTHO05D006114 1.9e-45 186.0 108 88.0
TPR.G21885 Trifolium pratense HOM05D004760 ORTHO05D006114 2.5e-45 185.7 117 76.9
C01p34030 Brassica napus HOM05D004760 ORTHO05D006114 3.3e-45 185.3 129 70.5
BolC1t03372H Brassica oleracea HOM05D004760 ORTHO05D006114 3.3e-45 185.3 129 70.5
Ca_08122_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 3.3e-45 185.3 126 74.6
Psat3g094560 Pisum sativum HOM05D004760 ORTHO05D006114 3.3e-45 185.3 125 72.8
VMungo0331G0086 Vigna mungo HOM05D004760 ORTHO05D006114 3.3e-45 185.3 127 73.2
HanXRQChr14g0432111 Helianthus annuus HOM05D004760 ORTHO05D006114 7.4e-45 184.1 114 81.6
Medtr7g083650 Medicago truncatula HOM05D004760 ORTHO05D006114 2.8e-44 182.2 122 77.0
FAN16G0053 Fragaria x ananassa HOM05D004760 ORTHO05D006114 4.8e-44 181.4 125 74.4
BcaC09g49679 Brassica carinata HOM05D004760 ORTHO05D006114 6.2e-44 181.0 129 69.0
SHI30132 Sapria himalayana HOM05D004760 ORTHO05D006114 1.8e-43 179.5 117 75.2
Eucgr.B02540 Eucalyptus grandis HOM05D004760 ORTHO05D006114 3.4e-42 175.3 118 75.4
Nitab4.5_0002186g0070 Nicotiana tabacum HOM05D004760 ORTHO05D006114 4.5e-42 174.9 110 81.8
PGR102G1962 Punica granatum HOM05D004760 ORTHO05D006114 4.5e-42 174.9 123 73.2
RcHm_v2.0_Chr4g0444611 Rosa chinensis HOM05D004760 ORTHO05D006114 5.8e-42 174.5 121 75.2
Haze_20543 Corylus avellana HOM05D004760 ORTHO05D006114 1.0e-41 173.7 123 68.3
Nn7g38254 Nelumbo nucifera HOM05D004760 ORTHO05D006114 6.5e-41 171.0 98 88.8
ECA240G4818 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.1e-40 170.2 99 87.9
RcHm_v2.0_Chr5g0057731 Rosa chinensis HOM05D004760 ORTHO05D006114 1.1e-40 170.2 98 87.8
EL10Ac9g22581 Beta vulgaris HOM05D004760 ORTHO05D006114 1.9e-40 169.5 105 78.1
MBI18_g16202_MAGBIO Magnolia biondii HOM05D004760 ORTHO05D006114 4.2e-40 168.3 119 71.4
FvH4_3g31090 Fragaria vesca HOM05D004760 ORTHO05D006114 2.1e-39 166.0 98 83.7
CDE09G0496 Ceratophyllum demersum HOM05D004760 ORTHO05D001676 2.7e-39 165.6 118 72.9
CDE02G4002 Ceratophyllum demersum HOM05D004760 ORTHO05D006114 1.8e-38 162.9 118 72.0
Dinv37316 Davidia involucrata HOM05D004760 ORTHO05D006114 5.1e-38 161.4 95 85.3
ECA238G2603 Erigeron canadensis HOM05D004760 ORTHO05D006114 6.7e-38 161.0 100 78.0
Actinidia13489 Actinidia chinensis HOM05D004760 ORTHO05D006114 1.1e-37 160.2 90 85.6
HPP92_025344 Vanilla planifolia HOM05D004760 ORTHO05D006114 2.1e-36 156.0 118 65.3
arahy.Tifrunner.gnm1.ann1.0NB9P2 Arachis hypogaea HOM05D004760 ORTHO05D006114 3.7e-36 155.2 109 71.6
BcaB05g23055 Brassica carinata HOM05D004760 ORTHO05D006114 3.7e-36 155.2 121 66.9
A01p26650 Brassica napus HOM05D004760 ORTHO05D006114 6.3e-36 154.5 98 78.6
BraA01t02596Z Brassica rapa HOM05D004760 ORTHO05D006114 6.3e-36 154.5 98 78.6
Os09g0549700 Oryza sativa ssp. japonica HOM05D004760 ORTHO05D006114 8.2e-36 154.1 120 65.0
Actinidia14009 Actinidia chinensis HOM05D004760 ORTHO05D006114 9.0e-35 150.6 113 72.6
Zm00001eb320920 Zea mays HOM05D004760 ORTHO05D006114 5.9e-34 147.9 120 62.5
PSO339G3989 Papaver somniferum HOM05D004760 ORTHO05D006114 1.0e-33 147.1 119 65.5
PSO801G0746 Papaver somniferum HOM05D004760 ORTHO05D006114 1.0e-33 147.1 119 64.7
arahy.Tifrunner.gnm1.ann1.JVX2H3 Arachis hypogaea HOM05D004760 ORTHO05D002586 1.3e-33 146.7 106 69.8
Medtr1g080050 Medicago truncatula HOM05D004760 ORTHO05D006114 1.7e-33 146.4 122 65.6
arahy.Tifrunner.gnm1.ann1.PKX4UH Arachis hypogaea HOM05D004760 ORTHO05D006114 3.8e-33 145.2 99 74.7
Hund12449 Selenicereus undatus HOM05D004760 ORTHO05D006114 1.6e-31 139.8 86 77.9
CsaV3_6G014220 Cucumis sativus L. HOM05D004760 ORTHO05D006114 3.6e-31 138.7 123 61.8
Ca_06514_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 4.6e-31 138.3 106 67.0
Lalb_Chr02g0155851 Lupinus albus HOM05D004760 ORTHO05D006114 1.0e-30 137.1 115 56.5
Peaxi162Scf00351g00053 Petunia axillaris HOM05D004760 ORTHO05D006114 1.8e-30 136.3 90 75.6
QL11p023169 Quercus lobata HOM05D004760 ORTHO05D006114 1.1e-29 133.7 83 74.7
ATR0152G025 Amborella trichopoda HOM05D004760 ORTHO05D006114 1.9e-29 132.9 104 64.4
VMungo0720G1193 Vigna mungo HOM05D004760 ORTHO05D006114 9.7e-29 130.6 113 55.8
SHI02979 Sapria himalayana HOM05D004760 ORTHO05D006114 3.7e-28 128.6 88 67.0
TPR.G11257 Trifolium pratense HOM05D004760 ORTHO05D006114 1.4e-27 126.7 113 54.9
arahy.Tifrunner.gnm1.ann1.P1K6TB Arachis hypogaea HOM05D004760 ORTHO05D006114 1.8e-27 126.3 85 76.5
DCAR_008992 Daucus carota HOM05D004760 ORTHO05D006114 1.8e-27 126.3 117 52.1
Medtr1g063230 Medicago truncatula HOM05D004760 ORTHO05D006114 3.1e-27 125.6 112 54.5
Glyma.10G055400 Glycine max HOM05D004760 ORTHO05D006114 4.1e-27 125.2 123 52.8
Phvul.007G219200 Phaseolus vulgaris HOM05D004760 ORTHO05D006114 4.1e-27 125.2 118 52.5
arahy.Tifrunner.gnm1.ann1.B7429M Arachis hypogaea HOM05D004760 ORTHO05D000042 1.2e-26 123.6 128 57.0
Lj5g0000803 Lotus japonicus HOM05D004760 ORTHO05D006114 5.9e-26 121.3 122 55.7
Psat6g074200 Pisum sativum HOM05D004760 ORTHO05D006114 1.3e-25 120.2 114 51.8
SEGI_39147 Sequoiadendron giganteum HOM05D004760 ORTHO05D006114 5.0e-25 118.2 114 56.1
Ca_11503_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 1.9e-24 116.3 106 54.7
Sc20g0005490 Simmondsia chinensis HOM05D004760 ORTHO05D006114 1.2e-23 113.6 115 52.2
EL10Ac7g16630 Beta vulgaris HOM05D004760 ORTHO05D039006 7.9e-23 110.9 132 47.0
MELO3C026909.2 Cucumis melo HOM05D004760 ORTHO05D006114 2.3e-22 109.4 76 78.9
AUR62040351 Chenopodium quinoa HOM05D004760 ORTHO05D039006 3.9e-22 108.6 131 45.0
ECA233G6109 Erigeron canadensis HOM05D000473 ORTHO05D001219 1.7e-20 103.2 61 82.0
Solyc11g069080.3 Solanum lycopersicum HOM05D004760 ORTHO05D006114 2.6e-18 95.9 59 76.3
AUR62042505 Chenopodium quinoa HOM05D004760 ORTHO05D138125 1.0e-09 67.4 75 49.3
Nn7g38187 Nelumbo nucifera HOM05D004760 ORTHO05D006114 1.0e-09 67.4 64 56.2
Lalb_Chr02g0155971 Lupinus albus HOM05D004760 ORTHO05D006114 1.1e-08 63.9 56 48.2
Lalb_Chr18g0045811 Lupinus albus HOM05D004009 ORTHO05D004617 4.0e-06 55.5 111 34.2


User provided reference genes

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