Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014003.1 Olea europaea HOM05D000452 ORTHO05D005748 6.3e-285 983.4 493 100.0
Oeu037301.1 Olea europaea HOM05D000452 ORTHO05D005748 3.2e-212 741.9 486 77.2
Oeu030194.1 Olea europaea HOM05D000452 ORTHO05D005748 4.0e-178 628.6 478 66.1
Migut.D02233 Erythranthe guttata HOM05D000452 ORTHO05D005748 1.3e-173 613.6 469 66.5
MSTRG.21118 Avicennia marina HOM05D000452 ORTHO05D005748 2.5e-172 609.4 476 65.8
Nitab4.5_0005742g0010 Nicotiana tabacum HOM05D000452 ORTHO05D005748 2.5e-172 609.4 474 63.5
SGA_v2.0_scaffold180G39657 Striga asiatica HOM05D000452 ORTHO05D005748 3.2e-172 609.0 475 64.2
Nitab4.5_0000602g0100 Nicotiana tabacum HOM05D000452 ORTHO05D005748 9.4e-172 607.4 474 62.9
Actinidia03722 Actinidia chinensis HOM05D000452 ORTHO05D005748 6.3e-168 594.7 469 63.5
Cc01_g11000 Coffea canephora HOM05D000452 ORTHO05D005748 8.3e-168 594.3 472 62.9
Peaxi162Scf00270g00311 Petunia axillaris HOM05D000452 ORTHO05D005748 1.8e-167 593.2 472 62.5
PGSC0003DMG400008083 Solanum tuberosum HOM05D000452 ORTHO05D005748 4.1e-167 592.0 474 61.8
CSS0006947 Camellia sinensis var. sinensis HOM05D000452 ORTHO05D005748 5.9e-166 588.2 472 63.1
GSVIVG01025200001 Vitis vinifera HOM05D000452 ORTHO05D005748 1.3e-165 587.0 465 63.7
Solyc11g069520.2 Solanum lycopersicum HOM05D000452 ORTHO05D005748 5.5e-164 581.6 474 61.6
Sopen11g028230 Solanum pennellii HOM05D000452 ORTHO05D005748 6.1e-163 578.2 474 61.4
TAR636G2205 Trochodendron aralioides HOM05D000452 ORTHO05D005748 8.9e-162 574.3 475 62.7
CANSAT54G2994 Cannabis sativa HOM05D000452 ORTHO05D005748 4.4e-161 572.0 474 61.4
Haze_23811 Corylus avellana HOM05D000452 ORTHO05D005748 1.7e-160 570.1 474 61.0
Hma1.2p1_0307F.1_g119780 Hydrangea macrophylla HOM05D000452 ORTHO05D005748 4.1e-159 565.5 474 62.0
CiPaw.13G114400 Carya illinoinensis HOM05D000452 ORTHO05D005748 1.2e-158 563.9 473 61.5
Rhsim13G0095000 Rhododendron simsii HOM05D000452 ORTHO05D005748 1.0e-157 560.8 430 66.3
MD03G1119900 Malus domestica HOM05D000452 ORTHO05D005748 2.3e-157 559.7 476 61.6
vmacro03204 Vaccinium macrocarpon HOM05D000452 ORTHO05D005748 2.3e-157 559.7 466 62.4
Cfa011305 Carpinus fangiana HOM05D000452 ORTHO05D005748 1.5e-156 557.0 443 63.4
MD11G1137500 Malus domestica HOM05D000452 ORTHO05D005748 6.1e-155 551.6 476 61.3
Sc06g0010310 Simmondsia chinensis HOM05D000452 ORTHO05D005748 1.8e-154 550.1 443 60.9
TWI31G0927 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 4.0e-154 548.9 457 60.4
HanXRQChr01g0019321 Helianthus annuus HOM05D000452 ORTHO05D005748 8.9e-154 547.7 447 61.3
Gorai.003G142700 Gossypium raimondii HOM05D000452 ORTHO05D005748 1.2e-153 547.4 463 60.9
FvH4_3g31960 Fragaria vesca HOM05D000452 ORTHO05D005748 1.5e-153 547.0 471 60.3
PSO339G2396 Papaver somniferum HOM05D000452 ORTHO05D005748 2.0e-153 546.6 475 58.1
FAN21G3667 Fragaria x ananassa HOM05D000452 ORTHO05D005748 2.6e-153 546.2 471 60.1
FAN11G0834 Fragaria x ananassa HOM05D000452 ORTHO05D005748 4.4e-153 545.4 471 60.1
Prupe.6G103100 Prunus persica HOM05D000452 ORTHO05D005748 4.4e-153 545.4 461 61.8
FAN25G3410 Fragaria x ananassa HOM05D000452 ORTHO05D005748 1.7e-152 543.5 471 60.5
RcHm_v2.0_Chr5g0058721 Rosa chinensis HOM05D000452 ORTHO05D005748 1.7e-152 543.5 474 60.3
Manes.04G019700 Manihot esculenta HOM05D000452 ORTHO05D005748 3.7e-152 542.3 471 58.8
Gohir.A03G032800 Gossypium hirsutum HOM05D000452 ORTHO05D005748 8.3e-152 541.2 463 60.3
Gohir.D03G135600 Gossypium hirsutum HOM05D000452 ORTHO05D005748 1.1e-151 540.8 464 60.6
TWI79G0017 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 1.4e-151 540.4 455 60.7
TAR633G0246 Trochodendron aralioides HOM05D000452 ORTHO05D005748 5.4e-151 538.5 463 60.0
ECA248G3240 Erigeron canadensis HOM05D000452 ORTHO05D005748 1.6e-150 537.0 447 60.9
Dinv02128 Davidia involucrata HOM05D000452 ORTHO05D005748 1.0e-149 534.3 471 59.4
Thecc.09G342400 Theobroma cacao HOM05D000452 ORTHO05D005748 1.7e-149 533.5 466 59.4
Lalb_Chr01g0004351 Lupinus albus HOM05D000452 ORTHO05D005748 2.3e-149 533.1 475 56.4
VMungo1127G0723 Vigna mungo HOM05D000452 ORTHO05D005748 2.3e-149 533.1 437 62.0
Potri.009G011400 Populus trichocarpa HOM05D000452 ORTHO05D005748 5.0e-149 531.9 468 58.5
Glyma.11G145300 Glycine max HOM05D000452 ORTHO05D005748 1.1e-148 530.8 473 58.8
COL.COLO4_18319 Corchorus olitorius HOM05D000452 ORTHO05D002419 1.9e-148 530.0 458 60.3
Ciclev10028288m.g Citrus clementina HOM05D000452 ORTHO05D005748 2.5e-148 529.6 471 56.5
DCAR_022745 Daucus carota HOM05D000452 ORTHO05D005748 7.3e-148 528.1 435 60.2
Lalb_Chr19g0137171 Lupinus albus HOM05D000452 ORTHO05D005748 9.5e-148 527.7 469 57.6
Lj2C1024T12 Lonicera japonica HOM05D000452 ORTHO05D005748 1.2e-147 527.3 441 61.0
Aqoxy1G01223 Aquilegia oxysepala HOM05D000452 ORTHO05D005748 1.1e-146 524.2 488 55.1
Phvul.011G080300 Phaseolus vulgaris HOM05D000452 ORTHO05D005748 2.3e-146 523.1 437 61.8
EL10Ac9g22533 Beta vulgaris HOM05D000452 ORTHO05D005748 5.2e-146 521.9 465 58.3
arahy.Tifrunner.gnm1.ann1.I1PATR Arachis hypogaea HOM05D000452 ORTHO05D005748 1.5e-145 520.4 446 59.0
HanXRQChr07g0195801 Helianthus annuus HOM05D000452 ORTHO05D005748 7.5e-145 518.1 469 56.5
arahy.Tifrunner.gnm1.ann1.AXM315 Arachis hypogaea HOM05D000452 ORTHO05D005748 1.7e-144 516.9 446 58.7
AUR62042196 Chenopodium quinoa HOM05D000452 ORTHO05D005748 3.7e-144 515.8 443 60.5
Nn2g10818 Nelumbo nucifera HOM05D000452 ORTHO05D005748 4.9e-144 515.4 470 57.4
Sed0009159 Sechium edule HOM05D000452 ORTHO05D005748 2.4e-143 513.1 470 57.4
arahy.Tifrunner.gnm1.ann1.S7ZFT4 Arachis hypogaea HOM05D000452 ORTHO05D005748 3.2e-143 512.7 471 56.7
QL01p021907 Quercus lobata HOM05D000452 ORTHO05D005748 3.2e-143 512.7 568 49.6
Lj3g0027876 Lotus japonicus HOM05D000452 ORTHO05D005748 5.4e-143 511.9 448 59.8
Medtr4g058890 Medicago truncatula HOM05D000452 ORTHO05D005748 5.4e-143 511.9 471 57.3
AUR62024960 Chenopodium quinoa HOM05D000452 ORTHO05D005748 2.1e-142 510.0 445 60.2
MELO3C004897.2 Cucumis melo HOM05D000452 ORTHO05D005748 2.1e-142 510.0 441 59.9
arahy.Tifrunner.gnm1.ann1.WEDN33 Arachis hypogaea HOM05D000452 ORTHO05D005748 1.1e-138 497.7 452 58.4
ClCG01G013590 Citrullus lanatus HOM05D000452 ORTHO05D005748 1.8e-138 496.9 434 57.8
CsaV3_1G013960 Cucumis sativus L. HOM05D000452 ORTHO05D005748 6.8e-138 495.0 433 58.9
Lsat_1_v5_gn_1_64080 Lactuca sativa HOM05D000452 ORTHO05D005748 8.9e-138 494.6 424 59.7
PSO384G2013 Papaver somniferum HOM05D000452 ORTHO05D005748 2.6e-137 493.0 447 57.5
AL1G18360 Arabidopsis lyrata HOM05D000452 ORTHO05D005748 3.4e-137 492.7 449 56.3
PSO339G5930 Papaver somniferum HOM05D000452 ORTHO05D005748 7.5e-137 491.5 447 57.0
unitig_736.g22410 Utricularia gibba HOM05D000452 ORTHO05D005748 3.7e-136 489.2 485 55.7
CARHR007800 Cardamine hirsuta HOM05D000452 ORTHO05D005748 8.3e-136 488.0 453 55.2
ECA238G2818 Erigeron canadensis HOM05D000452 ORTHO05D005748 8.3e-136 488.0 473 53.9
THA.LOC104800598 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 1.4e-135 487.3 430 57.2
BcaC05g24718 Brassica carinata HOM05D000452 ORTHO05D005748 1.9e-135 486.9 474 53.4
BolC5t29365H Brassica oleracea HOM05D000452 ORTHO05D005748 1.9e-135 486.9 474 53.4
Thhalv10007441m.g Eutrema salsugineum HOM05D000452 ORTHO05D005748 2.4e-135 486.5 465 54.8
AT1G08030 Arabidopsis thaliana HOM05D000452 ORTHO05D005748 3.2e-135 486.1 471 54.6
Eucgr.B02508 Eucalyptus grandis HOM05D000452 ORTHO05D005748 9.2e-135 484.6 467 56.1
Lj1C203G7 Lonicera japonica HOM05D000452 ORTHO05D005748 2.7e-134 483.0 441 58.3
BcaB02g06693 Brassica carinata HOM05D000452 ORTHO05D005748 6.0e-134 481.9 473 52.9
BraA06t23716Z Brassica rapa HOM05D000452 ORTHO05D005748 6.0e-134 481.9 473 53.3
Carub.0001s0737 Capsella rubella HOM05D000452 ORTHO05D005748 3.0e-133 479.6 464 53.9
THA.LOC104826371 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 3.0e-133 479.6 458 54.4
CsaV3_1G013970 Cucumis sativus L. HOM05D000452 ORTHO05D005748 1.1e-132 477.6 448 54.9
Sp1g06650 Schrenkiella parvula HOM05D000452 ORTHO05D005748 1.5e-132 477.2 444 54.5
A06p05090 Brassica napus HOM05D000452 ORTHO05D005748 1.9e-132 476.9 447 55.9
A08p35370 Brassica napus HOM05D000452 ORTHO05D005748 1.2e-131 474.2 471 53.1
BolC8t47149H Brassica oleracea HOM05D000452 ORTHO05D005748 1.2e-131 474.2 472 52.3
BraA08t35443Z Brassica rapa HOM05D000452 ORTHO05D005748 1.2e-131 474.2 453 54.7
Oeu001281.1 Olea europaea HOM05D000452 ORTHO05D005748 1.2e-131 474.2 354 68.4
CDE02G3238 Ceratophyllum demersum HOM05D000452 ORTHO05D005748 1.6e-131 473.8 449 54.1
C05p06050 Brassica napus HOM05D000452 ORTHO05D005748 2.8e-131 473.0 448 56.2
Cpa.g.sc279.1 Carica papaya HOM05D000452 ORTHO05D005748 3.6e-131 472.6 431 57.5
CsaV3_1G013990 Cucumis sativus L. HOM05D000452 ORTHO05D005748 3.6e-131 472.6 448 54.5
C08p03470 Brassica napus HOM05D000452 ORTHO05D005748 1.1e-130 471.1 472 52.1
Zm00001eb376480 Zea mays HOM05D000452 ORTHO05D005748 1.4e-130 470.7 441 54.9
Zm00001eb271200 Zea mays HOM05D000452 ORTHO05D005748 1.8e-130 470.3 452 54.2
PGR102G2372 Punica granatum HOM05D000452 ORTHO05D005748 2.4e-130 469.9 462 54.3
Psat7g192440 Pisum sativum HOM05D000452 ORTHO05D005748 2.9e-128 463.0 472 53.4
CiPaw.14G081900 Carya illinoinensis HOM05D000452 ORTHO05D005748 8.7e-125 451.4 442 55.0
BcaB03g13356 Brassica carinata HOM05D000452 ORTHO05D005748 1.1e-124 451.1 462 51.7
Aa31sc122G10 Aethionema arabicum HOM05D000452 ORTHO05D005748 1.8e-122 443.7 445 53.0
ATR0048G028 Amborella trichopoda HOM05D000452 ORTHO05D005748 1.8e-122 443.7 385 59.2
Lsat_1_v5_gn_2_100281 Lactuca sativa HOM05D000452 ORTHO05D005748 3.4e-121 439.5 426 53.8
SEGI_04235 Sequoiadendron giganteum HOM05D000452 ORTHO05D005748 4.4e-121 439.1 442 51.4
SalBow3G4114 Salvia bowleyana HOM05D000452 ORTHO05D005748 3.8e-120 436.0 338 64.2
Peaxi162Scf00034g00107 Petunia axillaris HOM05D000452 ORTHO05D005748 4.2e-119 432.6 475 49.7
MBI07_g26020_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 3.1e-114 416.4 399 56.6
Ca_19270_v3 Cicer arietinum L. HOM05D000452 ORTHO05D005748 2.6e-113 413.3 462 50.2
PSO063G2649 Papaver somniferum HOM05D000452 ORTHO05D005748 3.8e-112 409.5 376 56.6
TPR.G6153 Trifolium pratense HOM05D000452 ORTHO05D005748 5.1e-109 399.1 468 48.5
Atru.chr3.3611 Acer truncatum HOM05D000452 ORTHO05D005748 2.4e-106 390.2 427 52.5
HPP92_008616 Vanilla planifolia HOM05D000452 ORTHO05D005748 7.6e-105 385.2 304 59.5
Lsat_1_v5_gn_9_37660 Lactuca sativa HOM05D000452 ORTHO05D005748 4.2e-103 379.4 305 60.7
RhsimUnG0046400 Rhododendron simsii HOM05D000452 ORTHO05D005748 2.1e-102 377.1 435 50.6
CsaV3_1G013980 Cucumis sativus L. HOM05D000452 ORTHO05D005748 2.3e-101 373.6 438 47.7
Mapoly0061s0093 Marchantia polymorpha HOM05D000452 ORTHO05D005748 1.1e-100 371.3 451 45.9
Pp3c16_24250 Physcomitrium patens HOM05D000452 ORTHO05D005748 3.5e-94 349.7 504 42.9
Hund08167 Selenicereus undatus HOM05D000452 ORTHO05D005748 6.7e-93 345.5 334 55.1
AagrBONN_evm.TU.Sc2ySwM_117.3844 Anthoceros agrestis HOM05D000452 ORTHO05D005748 1.3e-88 331.3 490 41.8
Lsat_1_v5_gn_2_91861 Lactuca sativa HOM05D000452 ORTHO05D005748 1.3e-88 331.3 301 55.8
DCAR_018802 Daucus carota HOM05D000452 ORTHO05D005748 1.8e-77 294.3 297 50.5
SMO134G0053 Selaginella moellendorffii HOM05D000452 ORTHO05D005748 3.1e-74 283.5 313 48.6
Dinv01781 Davidia involucrata HOM05D000452 ORTHO05D005748 6.5e-72 275.8 188 68.6
SHI19559 Sapria himalayana HOM05D000452 ORTHO05D005748 1.5e-68 264.6 222 55.9
Dinv32733 Davidia involucrata HOM05D000452 ORTHO05D005748 3.7e-67 260.0 236 61.0
MBI10_g19822_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 1.1e-66 258.5 247 55.5
CBR_g51944 Chara braunii HOM05D000452 ORTHO05D005748 1.8e-66 257.7 506 33.4
Os06g0158200 Oryza sativa ssp. japonica HOM05D000452 ORTHO05D005748 1.2e-62 245.0 189 61.4
Lsat_1_v5_gn_5_88800 Lactuca sativa HOM05D000452 ORTHO05D005748 7.2e-47 192.6 186 52.7
TPR.G26833 Trifolium pratense HOM05D000452 ORTHO05D005748 2.6e-44 184.1 130 66.9
PRCOL_00001963 Prasinoderma coloniale HOM05D000452 ORTHO05D005748 2.8e-38 164.1 456 29.2
Cre01.g022600 Chlamydomonas reinhardtii HOM05D000452 ORTHO05D005748 2.3e-37 161.0 292 33.2
Lsat_1_v5_gn_3_50740 Lactuca sativa HOM05D000452 ORTHO05D005748 1.1e-31 142.1 122 57.4
SHI19558 Sapria himalayana HOM05D000452 ORTHO05D000031 2.2e-27 127.9 217 35.5
MD11G1150200 Malus domestica HOM05D000452 ORTHO05D005748 6.4e-27 126.3 80 67.5
Hund08166 Selenicereus undatus HOM05D000452 ORTHO05D005748 4.1e-26 123.6 88 64.8
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 2.3e-24 117.9 87 65.5
MBI15_g38533_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 5.1e-24 116.7 125 53.6
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 3.9e-16 90.5 68 66.2
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 8.6e-16 89.4 65 63.1
HPP92_008615 Vanilla planifolia HOM05D000452 ORTHO05D005748 8.6e-16 89.4 152 40.1
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 1.9e-15 88.2 68 64.7
C07p54990 Brassica napus HOM05D000452 ORTHO05D005748 3.5e-09 67.4 46 63.0
PRCOL_00002815 Prasinoderma coloniale HOM05D000452 ORTHO05D333388 4.6e-09 67.0 182 28.0
Lsat_1_v5_gn_4_22460 Lactuca sativa HOM05D000344 ORTHO05D005714 6.0e-09 66.6 57 57.9
BcaC02g07555 Brassica carinata HOM05D000452 ORTHO05D005748 1.3e-06 58.9 67 46.3


User provided reference genes

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