Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013912.1 Olea europaea HOM05D003874 ORTHO05D004545 1.9e-248 862.1 433 100.0
Migut.C01383 Erythranthe guttata HOM05D003874 ORTHO05D004545 6.3e-55 219.2 450 38.0
Oeu028635.2 Olea europaea HOM05D003874 ORTHO05D004545 5.4e-54 216.1 450 35.8
MSTRG.1601 Avicennia marina HOM05D003874 ORTHO05D004545 9.5e-51 205.3 446 35.4
MSTRG.24132 Avicennia marina HOM05D003874 ORTHO05D004545 1.2e-50 204.9 448 35.5
Dinv37410 Davidia involucrata HOM05D003874 ORTHO05D004545 1.3e-47 194.9 443 35.9
SGA_v2.0_scaffold24G10651 Striga asiatica HOM05D003874 ORTHO05D004545 1.6e-45 188.0 449 35.4
MSTRG.22473 Avicennia marina HOM05D003874 ORTHO05D004545 3.5e-45 186.8 442 34.4
SGA_v2.0_scaffold118G32614 Striga asiatica HOM05D003874 ORTHO05D004545 1.0e-44 185.3 439 33.5
SalBow6G4185 Salvia bowleyana HOM05D003874 ORTHO05D004545 2.3e-44 184.1 439 36.0
SalBow1G3841 Salvia bowleyana HOM05D003874 ORTHO05D004545 2.1e-42 177.6 441 34.9
Dinv22112 Davidia involucrata HOM05D003874 ORTHO05D004545 3.6e-42 176.8 443 33.6
SalBow7G3598 Salvia bowleyana HOM05D003874 ORTHO05D004545 1.4e-41 174.9 448 33.5
Nitab4.5_0000980g0270 Nicotiana tabacum HOM05D003874 ORTHO05D004545 5.8e-40 169.5 437 33.6
Rhsim12G0002900 Rhododendron simsii HOM05D003874 ORTHO05D004545 2.4e-38 164.1 456 33.1
CSS0015095 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 5.4e-38 162.9 434 32.3
CSS0009242 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 9.2e-38 162.2 437 32.0
Sabra13G0083800 Salix brachista HOM05D003874 ORTHO05D004545 1.6e-37 161.4 311 37.9
Sabra13G0085100 Salix brachista HOM05D003874 ORTHO05D004545 6.0e-37 159.5 453 30.9
Haze_13960 Corylus avellana HOM05D003874 ORTHO05D004545 3.0e-36 157.1 473 31.5
CSS0025181 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 8.6e-36 155.6 450 30.9
vmacro00941 Vaccinium macrocarpon HOM05D003874 ORTHO05D004545 3.3e-35 153.7 454 30.8
Manes.02G201800 Manihot esculenta HOM05D003874 ORTHO05D004545 4.3e-35 153.3 462 31.2
Nitab4.5_0000283g0160 Nicotiana tabacum HOM05D003874 ORTHO05D004545 4.3e-35 153.3 443 29.8
Prupe.8G006800 Prunus persica HOM05D003874 ORTHO05D004545 4.3e-35 153.3 447 30.4
Eucgr.F02945 Eucalyptus grandis HOM05D003874 ORTHO05D004545 1.1e-33 148.7 489 32.1
MD10G1004400 Malus domestica HOM05D003874 ORTHO05D004545 1.1e-33 148.7 470 29.6
Atru.chr13.2495 Acer truncatum HOM05D003874 ORTHO05D004545 1.4e-33 148.3 445 31.0
Potri.013G099200 Populus trichocarpa HOM05D003874 ORTHO05D004545 1.4e-33 148.3 469 29.2
Cc10_g08580 Coffea canephora HOM05D003874 ORTHO05D004545 1.8e-33 147.9 458 31.7
Cpa.g.sc21.87 Carica papaya HOM05D003874 ORTHO05D004545 2.3e-33 147.5 498 29.7
Sabra19G0083400 Salix brachista HOM05D003637 ORTHO05D004175 3.1e-33 147.1 483 31.3
CANSAT21G0097 Cannabis sativa HOM05D003874 ORTHO05D004545 5.2e-33 146.4 440 30.0
Atru.chr13.2507 Acer truncatum HOM05D003874 ORTHO05D004545 8.9e-33 145.6 445 30.8
Hma1.2p1_0016F.1_g010740 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 1.5e-32 144.8 273 39.9
Hma1.2p1_0016F.1_g010745 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 1.5e-32 144.8 273 39.9
Peaxi162Scf00078g00734 Petunia axillaris HOM05D003874 ORTHO05D004545 4.4e-32 143.3 461 28.4
COL.COLO4_25146 Corchorus olitorius HOM05D003874 ORTHO05D004545 1.3e-31 141.7 498 29.9
TAR628G1590 Trochodendron aralioides HOM05D003874 ORTHO05D004545 1.3e-31 141.7 475 29.9
Duzib268G0037 Durio zibethinus HOM05D003874 ORTHO05D004545 1.7e-31 141.4 489 29.7
Cfa008075 Carpinus fangiana HOM05D003874 ORTHO05D004545 2.2e-31 141.0 470 29.4
Manes.18G116100 Manihot esculenta HOM05D003874 ORTHO05D004545 3.7e-31 140.2 481 28.7
FAN27G1922 Fragaria x ananassa HOM05D003874 ORTHO05D004545 4.9e-31 139.8 437 30.7
FAN24G1984 Fragaria x ananassa HOM05D003874 ORTHO05D004545 8.4e-31 139.0 436 30.3
Gohir.D13G118600 Gossypium hirsutum HOM05D003874 ORTHO05D004545 1.1e-30 138.7 483 31.3
PGSC0003DMG400008421 Solanum tuberosum HOM05D003874 ORTHO05D004545 1.1e-30 138.7 466 29.2
Duzib177G0949 Durio zibethinus HOM05D003874 ORTHO05D004545 2.4e-30 137.5 484 30.2
FvH4_2g00770 Fragaria vesca HOM05D003874 ORTHO05D004545 2.4e-30 137.5 436 30.0
Gorai.013G133000 Gossypium raimondii HOM05D003874 ORTHO05D004545 3.2e-30 137.1 483 31.3
CiPaw.04G009100 Carya illinoinensis HOM05D003874 ORTHO05D004545 5.4e-30 136.3 490 29.8
Nn5g27385 Nelumbo nucifera HOM05D003874 ORTHO05D004545 1.2e-29 135.2 484 28.9
Potri.019G071300 Populus trichocarpa HOM05D003874 ORTHO05D004545 1.6e-29 134.8 471 29.5
Gohir.A13G115500 Gossypium hirsutum HOM05D003874 ORTHO05D004545 2.7e-29 134.0 480 30.4
FAN20G2080 Fragaria x ananassa HOM05D003874 ORTHO05D004545 3.5e-29 133.7 436 29.8
QL09p001799 Quercus lobata HOM05D003874 ORTHO05D004545 4.6e-29 133.3 478 29.1
MD05G1003400 Malus domestica HOM05D003874 ORTHO05D004545 6.0e-29 132.9 486 29.2
RcHm_v2.0_Chr6g0251151 Rosa chinensis HOM05D003874 ORTHO05D004545 6.0e-29 132.9 448 29.2
Aqoxy6G00117 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 1.0e-28 132.1 445 29.0
Lsat_1_v5_gn_9_75521 Lactuca sativa HOM05D003874 ORTHO05D004545 1.0e-28 132.1 435 29.2
TWI18G0284 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 1.0e-28 132.1 487 27.7
ECA232G3741 Erigeron canadensis HOM05D003874 ORTHO05D004545 5.1e-28 129.8 439 30.1
Actinidia03528 Actinidia chinensis HOM05D003874 ORTHO05D004545 8.6e-28 129.0 492 28.9
Thecc.08G178800 Theobroma cacao HOM05D003874 ORTHO05D004545 8.6e-28 129.0 483 29.2
Actinidia29373 Actinidia chinensis HOM05D003874 ORTHO05D004545 1.5e-27 128.3 493 28.8
DCAR_003510 Daucus carota HOM05D003874 ORTHO05D004545 1.5e-27 128.3 431 29.2
Nitab4.5_0000213g0070 Nicotiana tabacum HOM05D003874 ORTHO05D004545 1.9e-27 127.9 493 27.4
TAR376G0450 Trochodendron aralioides HOM05D003874 ORTHO05D004545 1.9e-27 127.9 469 30.5
CiPaw.03G014100 Carya illinoinensis HOM05D003874 ORTHO05D004545 2.5e-27 127.5 490 29.4
Nitab4.5_0000554g0030 Nicotiana tabacum HOM05D003874 ORTHO05D004545 2.5e-27 127.5 483 27.3
Oeu046029.1 Olea europaea HOM05D003874 ORTHO05D004545 1.6e-26 124.8 154 48.7
MELO3C022165.2 Cucumis melo HOM05D003874 ORTHO05D004545 1.4e-25 121.7 451 27.7
TWI75G0660 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 1.4e-25 121.7 490 27.6
Sopen07g031240 Solanum pennellii HOM05D003874 ORTHO05D004545 2.4e-25 120.9 433 29.8
PGSC0003DMG400012413 Solanum tuberosum HOM05D003874 ORTHO05D004545 4.0e-25 120.2 436 29.4
Ciclev10020185m.g Citrus clementina HOM05D003874 ORTHO05D004545 8.9e-25 119.0 485 27.4
Sed0026799 Sechium edule HOM05D003874 ORTHO05D004545 8.9e-25 119.0 450 27.3
Solyc07g063050.1 Solanum lycopersicum HOM05D003874 ORTHO05D004545 1.2e-24 118.6 433 29.6
Lj7A419T39 Lonicera japonica HOM05D003874 ORTHO05D004545 3.4e-24 117.1 511 26.4
ClCG05G024400 Citrullus lanatus HOM05D003874 ORTHO05D004545 4.4e-24 116.7 454 26.0
ClCG08G000760 Citrullus lanatus HOM05D003874 ORTHO05D004545 4.4e-24 116.7 449 26.9
THA.LOC104808737 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 4.4e-24 116.7 297 32.7
EL10Ac1g01274 Beta vulgaris HOM05D003874 ORTHO05D004545 1.3e-23 115.2 429 28.2
CsaV3_5G039860 Cucumis sativus L. HOM05D003874 ORTHO05D004545 1.7e-23 114.8 451 26.6
HanXRQChr15g0484691 Helianthus annuus HOM05D003874 ORTHO05D004545 3.8e-23 113.6 426 27.5
GSVIVG01036285001 Vitis vinifera HOM05D003874 ORTHO05D004545 4.9e-23 113.2 245 32.2
MELO3C008094.2 Cucumis melo HOM05D003874 ORTHO05D004545 6.4e-23 112.8 492 26.8
PGR042G0135 Punica granatum HOM05D003874 ORTHO05D004545 1.4e-22 111.7 460 27.6
Aa31LG9G4130 Aethionema arabicum HOM05D003874 ORTHO05D004545 2.4e-22 110.9 276 33.3
Sopen11g018310 Solanum pennellii HOM05D003874 ORTHO05D004545 4.2e-22 110.2 313 30.4
CsaV3_5G032550 Cucumis sativus L. HOM05D003874 ORTHO05D004545 1.6e-21 108.2 279 32.6
THA.LOC104821626 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 2.1e-21 107.8 285 35.1
MBI03_g29107_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 3.5e-21 107.1 486 25.9
PSO170G4959 Papaver somniferum HOM05D003874 ORTHO05D004545 3.5e-21 107.1 467 28.7
Ah.05g170390 Amaranthus hybridus HOM05D003874 ORTHO05D004545 4.6e-21 106.7 428 28.5
MELO3C012083.2 Cucumis melo HOM05D003874 ORTHO05D004545 4.6e-21 106.7 292 33.6
CAN.G761.10 Capsicum annuum HOM05D003874 ORTHO05D004545 7.8e-21 105.9 417 27.1
AUR62038535 Chenopodium quinoa HOM05D003874 ORTHO05D004545 7.8e-21 105.9 427 28.8
Sc21g0007200 Simmondsia chinensis HOM05D003874 ORTHO05D004545 1.0e-20 105.5 328 31.1
Aqoxy5G01942 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 2.3e-20 104.4 445 25.6
Carub.0007s2901 Capsella rubella HOM05D003874 ORTHO05D004545 5.1e-20 103.2 263 30.8
CAN.G761.11 Capsicum annuum HOM05D003874 ORTHO05D004545 1.1e-19 102.1 417 28.3
Sed0021145 Sechium edule HOM05D003874 ORTHO05D004545 1.9e-19 101.3 508 25.2
Thhalv10025948m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 1.3e-18 98.6 266 33.1
Thhalv10028826m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 1.3e-18 98.6 274 29.2
CDE02G0043 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 3.6e-18 97.1 456 26.5
AUR62013384 Chenopodium quinoa HOM05D003874 ORTHO05D004545 3.6e-18 97.1 426 27.0
CARHR219160 Cardamine hirsuta HOM05D003874 ORTHO05D004545 8.1e-18 95.9 264 32.2
CDE08G0633 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 1.1e-17 95.5 472 26.1
ClCG11G008410 Citrullus lanatus HOM05D003874 ORTHO05D004545 1.4e-17 95.1 365 29.3
PSO017G0683 Papaver somniferum HOM05D003874 ORTHO05D004545 2.4e-17 94.4 458 27.3
unitig_37.g13076 Utricularia gibba HOM05D003874 ORTHO05D004545 9.0e-17 92.4 107 41.1
AT4G13530 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 2.6e-16 90.9 264 30.7
DCAR_014068 Daucus carota HOM05D003874 ORTHO05D004545 2.6e-16 90.9 293 27.3
A05p16560 Brassica napus HOM05D003874 ORTHO05D004545 3.4e-16 90.5 263 32.3
AT4G10080 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 4.4e-16 90.1 293 28.3
AL7G43110 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 1.3e-15 88.6 267 28.5
Hund16917 Selenicereus undatus HOM05D003874 ORTHO05D004545 2.2e-15 87.8 257 29.2
THA.LOC104813368 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 2.9e-15 87.4 427 24.6
C06p17230 Brassica napus HOM05D003874 ORTHO05D004545 4.9e-15 86.7 260 30.8
BolC6t36923H Brassica oleracea HOM05D003874 ORTHO05D004545 4.9e-15 86.7 260 30.8
Sp7g11130 Schrenkiella parvula HOM05D003874 ORTHO05D004545 4.9e-15 86.7 262 30.2
THA.LOC104806752 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 6.4e-15 86.3 330 26.4
BcaC08g44301 Brassica carinata HOM05D003874 ORTHO05D004545 8.4e-15 85.9 260 30.8
CARHR261120 Cardamine hirsuta HOM05D003874 ORTHO05D004545 2.4e-14 84.3 260 27.7
BcaB01g01449 Brassica carinata HOM05D003874 ORTHO05D004545 4.2e-14 83.6 425 23.5
Aa31LG9G11920 Aethionema arabicum HOM05D003874 ORTHO05D004545 9.3e-14 82.4 332 27.7
BraA05t20564Z Brassica rapa HOM05D003874 ORTHO05D004545 1.2e-13 82.0 260 30.0
AL6G43860 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 1.6e-13 81.6 270 28.9
Oeu010438.1 Olea europaea HOM05D000969 ORTHO05D291885 1.6e-13 81.6 45 82.2
Sp6g07450 Schrenkiella parvula HOM05D003874 ORTHO05D004545 2.1e-13 81.3 283 29.3
Oeu006285.1 Olea europaea HOM05D000220 ORTHO05D000141 2.7e-13 80.9 46 80.4
Carub.0006s2864 Capsella rubella HOM05D003874 ORTHO05D004545 6.0e-13 79.7 264 28.8
BcaB05g23922 Brassica carinata HOM05D003874 ORTHO05D004545 1.0e-12 79.0 430 23.3
A09p28850 Brassica napus HOM05D003874 ORTHO05D004545 1.0e-12 79.0 226 26.5
BraA09t38447Z Brassica rapa HOM05D003874 ORTHO05D004545 1.0e-12 79.0 226 26.5
Zm00001eb182290 Zea mays HOM05D003874 ORTHO05D004545 1.0e-12 79.0 98 37.8
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 3.9e-12 77.0 37 91.9
Oeu062364.1 Olea europaea HOM05D000950 ORTHO05D000774 3.9e-12 77.0 37 94.6
BolC2t10292H Brassica oleracea HOM05D003874 ORTHO05D004545 5.1e-12 76.6 62 50.0
CsaV3_2G033240 Cucumis sativus L. HOM05D003874 ORTHO05D004545 1.1e-11 75.5 331 26.3
Oeu009059.1 Olea europaea HOM05D000182 ORTHO05D000112 1.1e-11 75.5 37 94.6
CARHR261100 Cardamine hirsuta HOM05D003874 ORTHO05D004545 2.5e-11 74.3 313 27.2
unitig_37.g13077 Utricularia gibba HOM05D003874 ORTHO05D030560 2.5e-11 74.3 104 46.2
arahy.Tifrunner.gnm1.ann1.GHV9B3 Arachis hypogaea HOM05D003874 ORTHO05D004545 3.3e-11 73.9 76 52.6
arahy.Tifrunner.gnm1.ann1.N113B0 Arachis hypogaea HOM05D003874 ORTHO05D004545 3.3e-11 73.9 76 52.6
Lalb_Chr15g0080071 Lupinus albus HOM05D003874 ORTHO05D004545 4.3e-11 73.6 228 28.5
Oeu035956.1 Olea europaea HOM05D007393 ORTHO05D003296 9.6e-11 72.4 51 66.7
BcaC03g16428 Brassica carinata HOM05D003874 ORTHO05D004545 1.6e-10 71.6 97 41.2
C02p42530 Brassica napus HOM05D003874 ORTHO05D004545 1.6e-10 71.6 97 41.2
Oeu057635.1 Olea europaea HOM05D000043 ORTHO05D001551 1.6e-10 71.6 38 86.8
MBI06_g14322_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 2.1e-10 71.2 125 33.6
A02p26740 Brassica napus HOM05D003874 ORTHO05D004545 4.8e-10 70.1 442 24.7
BraA02t07678Z Brassica rapa HOM05D003874 ORTHO05D004545 4.8e-10 70.1 442 24.7
Oeu042368.1 Olea europaea HOM05D002485 ORTHO05D002629 4.8e-10 70.1 37 86.5
CSS0021765 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 8.1e-10 69.3 44 75.0
BcaC04g21012 Brassica carinata HOM05D003874 ORTHO05D004545 1.4e-09 68.6 264 28.4
C09p36670 Brassica napus HOM05D003874 ORTHO05D004545 1.4e-09 68.6 264 28.4
BolC9t56498H Brassica oleracea HOM05D003874 ORTHO05D004545 1.4e-09 68.6 264 28.4
Oeu032991.1 Olea europaea HOM05D000021 ORTHO05D000010 1.4e-09 68.6 53 64.2
Os02g0558500 Oryza sativa ssp. japonica HOM05D003874 ORTHO05D004545 3.1e-09 67.4 60 41.7
Solyc11g040300.2 Solanum lycopersicum HOM05D003874 ORTHO05D004545 1.5e-08 65.1 44 70.5
Psat5g232160 Pisum sativum HOM05D003874 ORTHO05D004545 4.5e-08 63.5 247 23.9
CDE07G0664 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 5.8e-08 63.2 75 34.7
Lj3g0022236 Lotus japonicus HOM05D003874 ORTHO05D004545 5.8e-08 63.2 248 24.2
Nn4g22326 Nelumbo nucifera HOM05D003874 ORTHO05D004545 7.6e-08 62.8 43 69.8
TPR.G25536 Trifolium pratense HOM05D003874 ORTHO05D004545 7.6e-08 62.8 253 25.3
HPP92_005639 Vanilla planifolia HOM05D000572 ORTHO05D000840 9.9e-08 62.4 286 27.3
SalBow2G2594 Salvia bowleyana HOM05D033584 ORTHO05D030560 1.3e-07 62.0 159 35.2
Ca_27532_v3 Cicer arietinum L. HOM05D003874 ORTHO05D004545 2.9e-07 60.8 227 26.0
Medtr3g006350 Medicago truncatula HOM05D003874 ORTHO05D004545 2.9e-07 60.8 79 39.2
HPP92_009210 Vanilla planifolia HOM05D003874 ORTHO05D004545 1.9e-06 58.2 266 21.8
Phvul.005G002800 Phaseolus vulgaris HOM05D003874 ORTHO05D004545 7.1e-06 56.2 45 68.9
VMungo1080G0642 Vigna mungo HOM05D003874 ORTHO05D004545 7.1e-06 56.2 45 68.9
BcaB05g25162 Brassica carinata HOM05D003874 ORTHO05D004545 9.3e-06 55.8 174 29.3
Glyma.06G323500 Glycine max HOM05D003874 ORTHO05D004545 9.3e-06 55.8 245 23.7


User provided reference genes

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