Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 1.2e-107 393.3 211 100.0
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 8.4e-69 264.2 207 67.6
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 1.1e-68 263.8 208 68.3
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 1.1e-68 263.8 208 67.3
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 4.2e-68 261.9 208 66.8
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 6.0e-67 258.1 208 66.3
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 3.9e-66 255.4 208 66.3
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 6.6e-66 254.6 208 63.9
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 2.5e-65 252.7 208 62.5
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 2.5e-65 252.7 208 63.5
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 2.5e-65 252.7 208 63.9
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 4.3e-65 251.9 208 62.5
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 4.3e-65 251.9 208 63.9
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 5.6e-65 251.5 208 64.9
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 9.6e-65 250.8 206 63.6
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 1.6e-64 250.0 203 65.0
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 2.8e-64 249.2 208 63.0
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 4.8e-64 248.4 208 65.4
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.8e-63 246.5 208 63.0
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 3.1e-63 245.7 203 64.0
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 4.0e-63 245.4 208 63.0
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 4.0e-63 245.4 208 61.1
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 2.0e-62 243.0 208 59.6
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 5.8e-62 241.5 209 62.7
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 9.9e-62 240.7 208 63.0
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 1.1e-60 237.3 208 61.5
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 1.4e-60 236.9 209 61.2
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 1.9e-60 236.5 208 58.2
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 2.4e-60 236.1 210 61.4
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 4.2e-60 235.3 209 61.2
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 5.4e-60 235.0 207 60.4
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 5.4e-60 235.0 208 60.6
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 7.1e-60 234.6 203 62.6
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 1.5e-57 226.9 208 57.7
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 3.3e-57 225.7 209 58.9
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 3.3e-57 225.7 208 57.7
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 3.3e-57 225.7 217 56.2
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 5.6e-57 224.9 209 58.4
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 5.6e-57 224.9 208 56.7
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 2.1e-56 223.0 214 57.0
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 6.2e-56 221.5 205 57.6
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 1.1e-55 220.7 209 56.0
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 1.8e-55 219.9 209 56.0
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 1.8e-55 219.9 209 56.0
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 2.4e-55 219.5 207 57.5
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 3.1e-55 219.2 209 56.0
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 5.3e-55 218.4 209 55.5
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 1.2e-54 217.2 209 55.5
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 2.0e-54 216.5 209 56.0
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 5.8e-54 214.9 204 54.9
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 5.8e-54 214.9 210 58.1
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 1.3e-53 213.8 188 58.5
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 2.7e-51 206.1 201 54.7
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 1.8e-50 203.4 166 62.7
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 6.7e-50 201.4 208 54.8
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 1.5e-49 200.3 203 54.2
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 6.5e-45 184.9 174 57.5
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 4.8e-40 168.7 209 46.4
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 2.6e-38 162.9 181 51.4
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 5.0e-37 158.7 208 43.8
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 5.1e-34 148.7 140 55.0
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 4.3e-33 145.6 111 65.8
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 1.2e-30 137.5 123 61.8
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 8.5e-29 131.3 207 36.7
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 6.7e-26 121.7 222 33.3
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 3.7e-24 115.9 106 61.3
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 8.0e-19 98.2 66 69.7
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 9.7e-17 91.3 64 70.3
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 2.4e-15 86.7 66 71.2
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 4.5e-14 82.4 67 59.7
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 1.6e-11 73.9 188 31.9
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 1.2e-09 67.8 147 35.4
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 1.3e-08 64.3 50 66.0


User provided reference genes

Program Settings