Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013867.1 Olea europaea HOM05D004202 ORTHO05D005021 2.3e-111 405.6 210 100.0
Oeu042085.1 Olea europaea HOM05D004202 ORTHO05D005021 2.4e-92 342.4 260 70.0
Oeu013862.1 Olea europaea HOM05D004202 ORTHO05D005021 1.4e-87 326.6 252 69.0
Oeu013866.1 Olea europaea HOM05D004202 ORTHO05D005021 4.6e-75 285.0 224 68.3
Oeu042081.1 Olea europaea HOM05D004202 ORTHO05D005021 1.2e-62 243.8 170 77.1
CSS0029540 Camellia sinensis var. sinensis HOM05D004202 ORTHO05D005021 4.2e-60 235.3 216 56.5
CSS0043041 Camellia sinensis var. sinensis HOM05D004202 ORTHO05D005021 4.2e-60 235.3 216 56.5
Lj5A72T20 Lonicera japonica HOM05D004202 ORTHO05D005021 4.2e-60 235.3 225 54.2
MSTRG.11142 Avicennia marina HOM05D004202 ORTHO05D005021 9.3e-60 234.2 229 53.7
CAN.G1503.7 Capsicum annuum HOM05D004202 ORTHO05D005021 9.3e-60 234.2 243 53.9
Nitab4.5_0008575g0020 Nicotiana tabacum HOM05D004202 ORTHO05D005021 9.3e-60 234.2 257 52.1
Dinv30605 Davidia involucrata HOM05D004202 ORTHO05D005021 2.1e-59 233.0 235 52.3
Nitab4.5_0003463g0060 Nicotiana tabacum HOM05D004202 ORTHO05D005021 7.8e-59 231.1 256 51.6
Peaxi162Scf00207g00630 Petunia axillaris HOM05D004202 ORTHO05D005021 2.3e-58 229.6 244 54.9
SalBow2G2770 Salvia bowleyana HOM05D004202 ORTHO05D005021 3.9e-58 228.8 251 49.4
Actinidia01745 Actinidia chinensis HOM05D004202 ORTHO05D005021 1.1e-57 227.3 222 53.6
Migut.I00763 Erythranthe guttata HOM05D004202 ORTHO05D005021 1.1e-57 227.3 233 56.2
SGA_v2.0_scaffold37G14766 Striga asiatica HOM05D004202 ORTHO05D005021 4.3e-57 225.3 219 54.8
Glyma.08G213100 Glycine max HOM05D004202 ORTHO05D005021 1.6e-56 223.4 228 57.5
MBI04_g19388_MAGBIO Magnolia biondii HOM05D004202 ORTHO05D005021 2.8e-56 222.6 216 54.6
Rhsim08G0212900 Rhododendron simsii HOM05D004202 ORTHO05D005021 2.8e-56 222.6 253 50.2
Glyma.07G029800 Glycine max HOM05D004202 ORTHO05D005021 4.8e-56 221.9 239 55.2
VMungo0331G0004 Vigna mungo HOM05D004202 ORTHO05D005021 4.8e-56 221.9 238 50.4
Prupe.3G087500 Prunus persica HOM05D004202 ORTHO05D005021 1.1e-55 220.7 231 51.9
Hma1.2p1_0042F.1_g025610 Hydrangea macrophylla HOM05D004202 ORTHO05D005021 1.4e-55 220.3 233 50.6
Solyc06g068150.3 Solanum lycopersicum HOM05D004202 ORTHO05D005021 1.8e-55 219.9 244 48.4
PGSC0003DMG400028510 Solanum tuberosum HOM05D004202 ORTHO05D005021 1.8e-55 219.9 244 48.8
Peaxi162Scf00332g00619 Petunia axillaris HOM05D004202 ORTHO05D005021 3.1e-55 219.2 257 50.2
Sopen06g025420 Solanum pennellii HOM05D004202 ORTHO05D005021 5.3e-55 218.4 242 47.9
PGSC0003DMG400000640 Solanum tuberosum HOM05D004202 ORTHO05D005021 9.0e-55 217.6 261 49.8
CAN.G407.80 Capsicum annuum HOM05D004202 ORTHO05D005021 2.6e-54 216.1 244 52.5
Cfa001960 Carpinus fangiana HOM05D004202 ORTHO05D005021 5.8e-54 214.9 216 53.2
Sopen03g035650 Solanum pennellii HOM05D004202 ORTHO05D005021 5.8e-54 214.9 257 50.2
Aqoxy7G02289 Aquilegia oxysepala HOM05D004202 ORTHO05D005021 7.6e-54 214.5 215 54.0
Lj9A500T78 Lonicera japonica HOM05D004202 ORTHO05D005021 7.6e-54 214.5 214 51.9
Solyc03g116740.3 Solanum lycopersicum HOM05D004202 ORTHO05D005021 7.6e-54 214.5 257 49.8
Medtr4g010120 Medicago truncatula HOM05D004202 ORTHO05D005021 9.9e-54 214.2 231 51.5
RcHm_v2.0_Chr2g0135261 Rosa chinensis HOM05D004202 ORTHO05D005021 9.9e-54 214.2 231 51.5
Duzib235G0370 Durio zibethinus HOM05D004202 ORTHO05D005021 2.2e-53 213.0 218 52.8
Thecc.06G024900 Theobroma cacao HOM05D004202 ORTHO05D005021 2.2e-53 213.0 216 52.8
Hma1.2p1_1144F.1_g261300 Hydrangea macrophylla HOM05D004202 ORTHO05D005021 2.9e-53 212.6 232 50.0
Lalb_Chr01g0012351 Lupinus albus HOM05D004202 ORTHO05D005021 2.9e-53 212.6 218 52.8
COL.COLO4_11948 Corchorus olitorius HOM05D004202 ORTHO05D005021 3.8e-53 212.2 218 51.4
Lsat_1_v5_gn_4_90081 Lactuca sativa HOM05D004202 ORTHO05D005021 3.8e-53 212.2 211 54.0
Haze_16560 Corylus avellana HOM05D004202 ORTHO05D005021 4.9e-53 211.8 216 52.3
LjContig00542g0021230 Lotus japonicus HOM05D004202 ORTHO05D005021 4.9e-53 211.8 235 49.8
Atru.chr1.2949 Acer truncatum HOM05D004202 ORTHO05D005021 8.4e-53 211.1 217 52.5
TWI18G0582 Tripterygium wilfordii HOM05D004202 ORTHO05D005021 1.1e-52 210.7 233 48.1
Psat7g257200 Pisum sativum HOM05D004202 ORTHO05D005021 1.4e-52 210.3 232 50.9
FAN09G0069 Fragaria x ananassa HOM05D004202 ORTHO05D005021 2.4e-52 209.5 227 51.1
TPR.G38651 Trifolium pratense HOM05D004202 ORTHO05D005021 2.4e-52 209.5 232 50.0
ECA232G2164 Erigeron canadensis HOM05D004202 ORTHO05D005021 4.2e-52 208.8 216 54.6
Phvul.010G156400 Phaseolus vulgaris HOM05D004202 ORTHO05D005021 5.4e-52 208.4 226 50.0
Eucgr.F03877 Eucalyptus grandis HOM05D004202 ORTHO05D005021 7.1e-52 208.0 231 50.2
HanXRQChr02g0058561 Helianthus annuus HOM05D004202 ORTHO05D005021 7.1e-52 208.0 226 51.3
MD17G1212200 Malus domestica HOM05D004202 ORTHO05D005021 7.1e-52 208.0 227 49.3
Manes.11G056900 Manihot esculenta HOM05D004202 ORTHO05D005021 7.1e-52 208.0 214 51.4
FvH4_6g29670 Fragaria vesca HOM05D004202 ORTHO05D005021 9.3e-52 207.6 227 51.1
FAN05G3204 Fragaria x ananassa HOM05D004202 ORTHO05D005021 9.3e-52 207.6 227 51.1
Potri.003G032200 Populus trichocarpa HOM05D004202 ORTHO05D005021 9.3e-52 207.6 213 53.1
Prupe.3G087400 Prunus persica HOM05D004202 ORTHO05D005021 1.2e-51 207.2 231 49.4
Nn8g39505 Nelumbo nucifera HOM05D004202 ORTHO05D005021 2.1e-51 206.5 210 51.9
TAR383G0028 Trochodendron aralioides HOM05D004202 ORTHO05D005021 2.1e-51 206.5 251 46.6
CiPaw.01G248300 Carya illinoinensis HOM05D004202 ORTHO05D005021 4.6e-51 205.3 216 51.4
Ciclev10026224m.g Citrus clementina HOM05D004202 ORTHO05D005021 4.6e-51 205.3 219 54.8
Sed0008120 Sechium edule HOM05D004202 ORTHO05D005021 4.6e-51 205.3 218 50.0
Cpa.g.sc10.268 Carica papaya HOM05D004202 ORTHO05D005021 1.3e-50 203.8 221 52.9
Lj3g0004144 Lotus japonicus HOM05D004202 ORTHO05D005021 1.3e-50 203.8 220 50.9
Potri.001G204100 Populus trichocarpa HOM05D004202 ORTHO05D005021 1.7e-50 203.4 214 52.8
THA.LOC104810509 Tarenaya hassleriana HOM05D004202 ORTHO05D005021 3.0e-50 202.6 237 47.3
Hund06558 Selenicereus undatus HOM05D004202 ORTHO05D005021 6.6e-50 201.4 216 50.5
arahy.Tifrunner.gnm1.ann1.KAJ2Z5 Arachis hypogaea HOM05D004202 ORTHO05D005021 8.7e-50 201.1 208 51.9
Aa31LG8G3020 Aethionema arabicum HOM05D004202 ORTHO05D005021 1.1e-49 200.7 239 46.0
CANSAT56G4089 Cannabis sativa HOM05D004202 ORTHO05D005021 1.1e-49 200.7 212 50.9
Manes.04G112600 Manihot esculenta HOM05D004202 ORTHO05D005021 1.5e-49 200.3 214 49.5
QL05p029813 Quercus lobata HOM05D004202 ORTHO05D005021 1.5e-49 200.3 213 50.2
CARHR090910 Cardamine hirsuta HOM05D004202 ORTHO05D005021 1.9e-49 199.9 217 49.8
Ca_20447_v3 Cicer arietinum L. HOM05D004202 ORTHO05D005021 1.9e-49 199.9 232 49.6
DCAR_025511 Daucus carota HOM05D004202 ORTHO05D005021 3.3e-49 199.1 235 47.2
Sabra03G0018400 Salix brachista HOM05D004202 ORTHO05D005021 4.3e-49 198.7 210 55.2
arahy.Tifrunner.gnm1.ann1.J5QNAH Arachis hypogaea HOM05D004202 ORTHO05D005021 5.6e-49 198.4 208 51.9
HanXRQChr16g0500411 Helianthus annuus HOM05D004202 ORTHO05D005021 5.6e-49 198.4 205 52.7
arahy.Tifrunner.gnm1.ann1.42NKCZ Arachis hypogaea HOM05D004202 ORTHO05D005021 7.3e-49 198.0 208 51.9
Gohir.A06G185500 Gossypium hirsutum HOM05D004202 ORTHO05D005021 9.6e-49 197.6 218 48.2
Ah.01g020590 Amaranthus hybridus HOM05D004202 ORTHO05D005021 1.3e-48 197.2 228 47.8
CsaV3_4G001700 Cucumis sativus L. HOM05D004202 ORTHO05D005021 1.6e-48 196.8 218 47.2
Duzib192G0312 Durio zibethinus HOM05D004202 ORTHO05D005021 1.6e-48 196.8 226 48.2
PGR102G1411 Punica granatum HOM05D004202 ORTHO05D005021 1.6e-48 196.8 209 50.7
Carub.0003s1556 Capsella rubella HOM05D004202 ORTHO05D005021 2.8e-48 196.1 214 49.5
FAN14G0864 Fragaria x ananassa HOM05D004202 ORTHO05D005021 2.8e-48 196.1 251 46.2
Sc10g0008080 Simmondsia chinensis HOM05D004202 ORTHO05D005021 3.6e-48 195.7 220 47.7
A05p33580 Brassica napus HOM05D004202 ORTHO05D005021 4.8e-48 195.3 220 47.7
Gohir.D05G124300 Gossypium hirsutum HOM05D004202 ORTHO05D005021 4.8e-48 195.3 222 50.0
Gorai.010G225300 Gossypium raimondii HOM05D004202 ORTHO05D005021 4.8e-48 195.3 218 47.2
AT3G15820 Arabidopsis thaliana HOM05D004202 ORTHO05D005021 6.2e-48 194.9 210 51.0
AL3G28480 Arabidopsis lyrata HOM05D004202 ORTHO05D005021 1.4e-47 193.7 210 50.0
BraA05t22181Z Brassica rapa HOM05D004202 ORTHO05D005021 1.4e-47 193.7 212 49.1
BcaC01g03855 Brassica carinata HOM05D004202 ORTHO05D005021 1.8e-47 193.4 218 48.2
BcaC05g28930 Brassica carinata HOM05D004202 ORTHO05D005021 1.8e-47 193.4 220 47.3
A03p39480 Brassica napus HOM05D004202 ORTHO05D005021 1.8e-47 193.4 218 48.2
C03p47880 Brassica napus HOM05D004202 ORTHO05D005021 1.8e-47 193.4 218 48.2
C05p50570 Brassica napus HOM05D004202 ORTHO05D005021 1.8e-47 193.4 220 47.3
BolC3t17065H Brassica oleracea HOM05D004202 ORTHO05D005021 1.8e-47 193.4 218 48.2
BraA03t13098Z Brassica rapa HOM05D004202 ORTHO05D005021 1.8e-47 193.4 218 48.2
Gohir.D06G192100 Gossypium hirsutum HOM05D004202 ORTHO05D005021 2.4e-47 193.0 218 46.8
Gorai.009G128300 Gossypium raimondii HOM05D004202 ORTHO05D005021 2.4e-47 193.0 222 50.0
PSO170G3116 Papaver somniferum HOM05D004202 ORTHO05D005021 2.4e-47 193.0 222 49.5
ClCG07G012460 Citrullus lanatus HOM05D004202 ORTHO05D005021 3.1e-47 192.6 214 47.7
Thhalv10021241m.g Eutrema salsugineum HOM05D004202 ORTHO05D005021 3.1e-47 192.6 218 47.7
PSO017G2363 Papaver somniferum HOM05D004202 ORTHO05D005021 6.9e-47 191.4 222 50.0
Sp3g14140 Schrenkiella parvula HOM05D004202 ORTHO05D005021 6.9e-47 191.4 218 46.8
BolC5t33802H Brassica oleracea HOM05D004202 ORTHO05D005021 9.0e-47 191.0 220 46.8
MELO3C017864.2 Cucumis melo HOM05D004202 ORTHO05D005021 9.0e-47 191.0 218 46.8
BcaB06g25690 Brassica carinata HOM05D004202 ORTHO05D005021 1.5e-46 190.3 218 47.2
AUR62011519 Chenopodium quinoa HOM05D004202 ORTHO05D005021 1.5e-46 190.3 213 45.1
AUR62016337 Chenopodium quinoa HOM05D004202 ORTHO05D005021 1.5e-46 190.3 224 43.8
Sc10g0005940 Simmondsia chinensis HOM05D004202 ORTHO05D005021 2.0e-46 189.9 213 48.8
EL10Ac9g21900 Beta vulgaris HOM05D004202 ORTHO05D005021 4.5e-46 188.7 213 46.9
Aqoxy4G02272 Aquilegia oxysepala HOM05D004202 ORTHO05D005021 5.8e-46 188.3 226 43.4
Carub.0003s1557 Capsella rubella HOM05D004202 ORTHO05D005021 5.8e-46 188.3 214 48.6
Gohir.A05G123350 Gossypium hirsutum HOM05D004202 ORTHO05D005021 2.9e-45 186.0 214 46.7
Lsat_1_v5_gn_1_34380 Lactuca sativa HOM05D004202 ORTHO05D005021 3.8e-45 185.7 218 49.1
AL3G28490 Arabidopsis lyrata HOM05D004202 ORTHO05D005021 8.4e-45 184.5 214 49.1
AT3G15830 Arabidopsis thaliana HOM05D004202 ORTHO05D005021 3.2e-44 182.6 214 48.6
MBI04_g42944_MAGBIO Magnolia biondii HOM05D004202 ORTHO05D005021 5.4e-44 181.8 125 69.6
BcaB04g20901 Brassica carinata HOM05D004202 ORTHO05D005021 9.3e-44 181.0 209 47.8
unitig_699.g19094 Utricularia gibba HOM05D004202 ORTHO05D005021 9.3e-44 181.0 207 46.9
BolC1t04818H Brassica oleracea HOM05D004202 ORTHO05D005021 6.0e-43 178.3 211 47.4
BcaC09g48559 Brassica carinata HOM05D004202 ORTHO05D005021 1.3e-42 177.2 217 47.0
C01p48640 Brassica napus HOM05D004202 ORTHO05D005021 1.3e-42 177.2 217 47.0
BraA01t03881Z Brassica rapa HOM05D004202 ORTHO05D005021 1.3e-42 177.2 211 46.9
A01p38300 Brassica napus HOM05D004202 ORTHO05D005021 2.5e-41 172.9 208 47.1
Thhalv10015624m.g Eutrema salsugineum HOM05D004202 ORTHO05D005021 4.3e-41 172.2 208 45.2
BcaC03g14245 Brassica carinata HOM05D004202 ORTHO05D005021 9.6e-41 171.0 207 44.4
C02p16260 Brassica napus HOM05D004202 ORTHO05D005021 9.6e-41 171.0 207 44.4
BolC2t07727H Brassica oleracea HOM05D004202 ORTHO05D005021 9.6e-41 171.0 207 44.4
CARHR090920 Cardamine hirsuta HOM05D004202 ORTHO05D005021 3.7e-40 169.1 214 44.9
CDE07G1814 Ceratophyllum demersum HOM05D004202 ORTHO05D005021 4.8e-40 168.7 227 44.9
HPP92_023144 Vanilla planifolia HOM05D004202 ORTHO05D005021 6.2e-40 168.3 204 46.1
GSVIVG01017341001 Vitis vinifera HOM05D004202 ORTHO05D005021 1.2e-38 164.1 178 49.4
Actinidia15761 Actinidia chinensis HOM05D004202 ORTHO05D005021 2.0e-38 163.3 137 55.5
Cc04_g04400 Coffea canephora HOM05D004202 ORTHO05D005021 5.8e-38 161.8 190 48.4
Os06g0607100 Oryza sativa ssp. japonica HOM05D004202 ORTHO05D005021 1.3e-34 150.6 216 41.2
Lj3g0021663 Lotus japonicus HOM05D004202 ORTHO05D005021 1.6e-32 143.7 239 38.9
A02p09730 Brassica napus HOM05D004202 ORTHO05D005021 1.1e-31 141.0 119 53.8
BraA02t06038Z Brassica rapa HOM05D004202 ORTHO05D005021 1.1e-31 141.0 119 53.8
BcaB05g22200 Brassica carinata HOM05D004202 ORTHO05D005021 2.4e-31 139.8 119 53.8
Sabra01G0157700 Salix brachista HOM05D004202 ORTHO05D005021 8.4e-29 131.3 216 39.8
Mapoly0019s0013 Marchantia polymorpha HOM05D004202 ORTHO05D005021 1.2e-27 127.5 201 36.8
BcaB01g04346 Brassica carinata HOM05D004202 ORTHO05D005021 1.8e-26 123.6 163 41.7
FAN02G2528 Fragaria x ananassa HOM05D004202 ORTHO05D005021 2.2e-24 116.7 279 32.3
Sp6g17250 Schrenkiella parvula HOM05D004202 ORTHO05D005021 2.6e-22 109.8 207 36.7
Thecc.06G024300 Theobroma cacao HOM05D004202 ORTHO05D005021 5.9e-22 108.6 131 48.9
Pp3c20_11410 Physcomitrium patens HOM05D004202 ORTHO05D005021 7.7e-22 108.2 208 30.8
Thecc.06G024700 Theobroma cacao HOM05D004202 ORTHO05D005021 1.7e-21 107.1 131 48.1
Pp3c8_10870 Physcomitrium patens HOM05D004202 ORTHO05D005021 2.5e-20 103.2 129 38.8
Nitab4.5_0000373g0060 Nicotiana tabacum HOM05D004202 ORTHO05D005021 3.2e-20 102.8 74 62.2
Lalb_Chr25g0279291 Lupinus albus HOM05D004202 ORTHO05D005021 7.2e-20 101.7 133 44.4
Lalb_Chr25g0279281 Lupinus albus HOM05D004202 ORTHO05D005021 6.1e-19 98.6 73 63.0
Nitab4.5_0000373g0050 Nicotiana tabacum HOM05D004202 ORTHO05D005021 1.5e-14 84.0 68 66.2
Lj5P198T82 Lonicera japonica HOM05D004202 ORTHO05D005021 2.9e-13 79.7 65 55.4
Zm00001eb386530 Zea mays HOM05D004202 ORTHO05D005021 9.4e-12 74.7 65 52.3
Lj5P204T31 Lonicera japonica HOM05D004202 ORTHO05D005021 1.0e-10 71.2 62 53.2
AagrBONN_evm.TU.Sc2ySwM_228.136 Anthoceros agrestis HOM05D004202 ORTHO05D005021 2.6e-09 66.6 84 42.9
QL03p052981 Quercus lobata HOM05D004202 ORTHO05D005021 1.5e-06 57.4 42 61.9


User provided reference genes

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