Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013862.1 Olea europaea HOM05D004202 ORTHO05D005021 3.6e-143 511.5 253 100.0
Oeu042085.1 Olea europaea HOM05D004202 ORTHO05D005021 1.9e-136 489.2 252 95.2
Oeu013866.1 Olea europaea HOM05D004202 ORTHO05D005021 1.1e-104 383.6 252 79.8
MSTRG.11142 Avicennia marina HOM05D004202 ORTHO05D005021 9.6e-104 380.6 229 78.6
CSS0029540 Camellia sinensis var. sinensis HOM05D004202 ORTHO05D005021 6.9e-102 374.4 216 81.5
CSS0043041 Camellia sinensis var. sinensis HOM05D004202 ORTHO05D005021 6.9e-102 374.4 216 81.5
Dinv30605 Davidia involucrata HOM05D004202 ORTHO05D005021 6.9e-102 374.4 243 74.5
SalBow2G2770 Salvia bowleyana HOM05D004202 ORTHO05D005021 1.2e-101 373.6 251 72.1
Actinidia01745 Actinidia chinensis HOM05D004202 ORTHO05D005021 4.9e-100 368.2 241 73.9
Lj5A72T20 Lonicera japonica HOM05D004202 ORTHO05D005021 4.9e-100 368.2 230 77.4
Nitab4.5_0008575g0020 Nicotiana tabacum HOM05D004202 ORTHO05D005021 2.5e-99 365.9 248 73.4
Rhsim08G0212900 Rhododendron simsii HOM05D004202 ORTHO05D005021 4.2e-99 365.2 234 75.6
Nitab4.5_0003463g0060 Nicotiana tabacum HOM05D004202 ORTHO05D005021 7.1e-99 364.4 247 73.7
SGA_v2.0_scaffold37G14766 Striga asiatica HOM05D004202 ORTHO05D005021 1.2e-98 363.6 219 79.9
Hma1.2p1_0042F.1_g025610 Hydrangea macrophylla HOM05D004202 ORTHO05D005021 4.3e-96 355.1 235 72.3
Prupe.3G087500 Prunus persica HOM05D004202 ORTHO05D005021 4.3e-96 355.1 231 73.6
RcHm_v2.0_Chr2g0135261 Rosa chinensis HOM05D004202 ORTHO05D005021 7.4e-96 354.4 231 74.9
Peaxi162Scf00332g00619 Petunia axillaris HOM05D004202 ORTHO05D005021 9.7e-96 354.0 253 70.8
CAN.G1503.7 Capsicum annuum HOM05D004202 ORTHO05D005021 1.3e-95 353.6 235 73.6
LjContig00542g0021230 Lotus japonicus HOM05D004202 ORTHO05D005021 1.6e-95 353.2 240 71.2
MBI04_g19388_MAGBIO Magnolia biondii HOM05D004202 ORTHO05D005021 2.1e-95 352.8 216 77.3
Sopen06g025420 Solanum pennellii HOM05D004202 ORTHO05D005021 4.8e-95 351.7 236 71.2
FAN09G0069 Fragaria x ananassa HOM05D004202 ORTHO05D005021 6.3e-95 351.3 227 75.3
Lj9A500T78 Lonicera japonica HOM05D004202 ORTHO05D005021 6.3e-95 351.3 242 71.1
Solyc06g068150.3 Solanum lycopersicum HOM05D004202 ORTHO05D005021 6.3e-95 351.3 236 71.6
VMungo0331G0004 Vigna mungo HOM05D004202 ORTHO05D005021 6.3e-95 351.3 231 73.2
PGSC0003DMG400000640 Solanum tuberosum HOM05D004202 ORTHO05D005021 8.2e-95 350.9 214 79.0
TWI18G0582 Tripterygium wilfordii HOM05D004202 ORTHO05D005021 8.2e-95 350.9 233 70.8
Migut.I00763 Erythranthe guttata HOM05D004202 ORTHO05D005021 1.1e-94 350.5 233 73.8
PGSC0003DMG400028510 Solanum tuberosum HOM05D004202 ORTHO05D005021 1.4e-94 350.1 236 71.6
FvH4_6g29670 Fragaria vesca HOM05D004202 ORTHO05D005021 2.4e-94 349.4 227 75.3
FAN05G3204 Fragaria x ananassa HOM05D004202 ORTHO05D005021 2.4e-94 349.4 227 75.3
Lalb_Chr01g0012351 Lupinus albus HOM05D004202 ORTHO05D005021 2.4e-94 349.4 235 73.2
CAN.G407.80 Capsicum annuum HOM05D004202 ORTHO05D005021 3.1e-94 349.0 214 79.0
Solyc03g116740.3 Solanum lycopersicum HOM05D004202 ORTHO05D005021 3.1e-94 349.0 214 78.5
Sopen03g035650 Solanum pennellii HOM05D004202 ORTHO05D005021 3.1e-94 349.0 214 78.5
Peaxi162Scf00207g00630 Petunia axillaris HOM05D004202 ORTHO05D005021 1.5e-93 346.7 236 72.5
Cfa001960 Carpinus fangiana HOM05D004202 ORTHO05D005021 2.6e-93 345.9 216 76.9
Thecc.06G024900 Theobroma cacao HOM05D004202 ORTHO05D005021 2.6e-93 345.9 228 73.7
Atru.chr1.2949 Acer truncatum HOM05D004202 ORTHO05D005021 4.5e-93 345.1 217 76.5
COL.COLO4_11948 Corchorus olitorius HOM05D004202 ORTHO05D005021 4.5e-93 345.1 218 75.2
Eucgr.F03877 Eucalyptus grandis HOM05D004202 ORTHO05D005021 4.5e-93 345.1 215 76.7
TAR383G0028 Trochodendron aralioides HOM05D004202 ORTHO05D005021 4.5e-93 345.1 234 71.8
CANSAT56G4089 Cannabis sativa HOM05D004202 ORTHO05D005021 5.9e-93 344.7 225 72.4
CiPaw.01G248300 Carya illinoinensis HOM05D004202 ORTHO05D005021 5.9e-93 344.7 216 75.9
Hma1.2p1_1144F.1_g261300 Hydrangea macrophylla HOM05D004202 ORTHO05D005021 5.9e-93 344.7 232 72.0
Haze_16560 Corylus avellana HOM05D004202 ORTHO05D005021 7.6e-93 344.4 216 76.4
TPR.G38651 Trifolium pratense HOM05D004202 ORTHO05D005021 7.6e-93 344.4 224 73.2
Manes.11G056900 Manihot esculenta HOM05D004202 ORTHO05D005021 1.0e-92 344.0 214 75.2
Lsat_1_v5_gn_4_90081 Lactuca sativa HOM05D004202 ORTHO05D005021 2.2e-92 342.8 222 73.9
Psat7g257200 Pisum sativum HOM05D004202 ORTHO05D005021 2.2e-92 342.8 222 74.8
Glyma.07G029800 Glycine max HOM05D004202 ORTHO05D005021 2.9e-92 342.4 226 74.3
MD17G1212200 Malus domestica HOM05D004202 ORTHO05D005021 3.8e-92 342.0 237 70.5
Duzib235G0370 Durio zibethinus HOM05D004202 ORTHO05D005021 5.0e-92 341.7 218 75.7
Glyma.08G213100 Glycine max HOM05D004202 ORTHO05D005021 5.0e-92 341.7 228 72.8
Potri.001G204100 Populus trichocarpa HOM05D004202 ORTHO05D005021 5.0e-92 341.7 214 77.1
PGR102G1411 Punica granatum HOM05D004202 ORTHO05D005021 6.5e-92 341.3 232 71.1
Potri.003G032200 Populus trichocarpa HOM05D004202 ORTHO05D005021 1.1e-91 340.5 213 77.0
QL05p029813 Quercus lobata HOM05D004202 ORTHO05D005021 1.1e-91 340.5 229 71.6
Medtr4g010120 Medicago truncatula HOM05D004202 ORTHO05D005021 1.4e-91 340.1 224 72.8
Phvul.010G156400 Phaseolus vulgaris HOM05D004202 ORTHO05D005021 2.5e-91 339.3 231 71.9
FAN14G0864 Fragaria x ananassa HOM05D004202 ORTHO05D005021 7.2e-91 337.8 251 68.1
Manes.04G112600 Manihot esculenta HOM05D004202 ORTHO05D005021 2.7e-90 335.9 214 73.8
HanXRQChr02g0058561 Helianthus annuus HOM05D004202 ORTHO05D005021 6.1e-90 334.7 211 74.4
arahy.Tifrunner.gnm1.ann1.KAJ2Z5 Arachis hypogaea HOM05D004202 ORTHO05D005021 7.9e-90 334.3 208 76.9
CARHR090910 Cardamine hirsuta HOM05D004202 ORTHO05D005021 1.0e-89 334.0 217 73.7
Prupe.3G087400 Prunus persica HOM05D004202 ORTHO05D005021 1.0e-89 334.0 228 70.6
Aa31LG8G3020 Aethionema arabicum HOM05D004202 ORTHO05D005021 1.8e-89 333.2 222 70.7
Nn8g39505 Nelumbo nucifera HOM05D004202 ORTHO05D005021 1.8e-89 333.2 208 76.0
THA.LOC104810509 Tarenaya hassleriana HOM05D004202 ORTHO05D005021 1.8e-89 333.2 229 69.0
Sed0008120 Sechium edule HOM05D004202 ORTHO05D005021 2.3e-89 332.8 218 73.4
arahy.Tifrunner.gnm1.ann1.J5QNAH Arachis hypogaea HOM05D004202 ORTHO05D005021 5.1e-89 331.6 208 76.9
arahy.Tifrunner.gnm1.ann1.42NKCZ Arachis hypogaea HOM05D004202 ORTHO05D005021 6.7e-89 331.3 208 76.9
Hund06558 Selenicereus undatus HOM05D004202 ORTHO05D005021 6.7e-89 331.3 216 74.5
Ca_20447_v3 Cicer arietinum L. HOM05D004202 ORTHO05D005021 1.9e-88 329.7 230 71.7
Thhalv10021241m.g Eutrema salsugineum HOM05D004202 ORTHO05D005021 5.7e-88 328.2 218 72.5
A05p33580 Brassica napus HOM05D004202 ORTHO05D005021 7.4e-88 327.8 220 72.3
AT3G15820 Arabidopsis thaliana HOM05D004202 ORTHO05D005021 9.7e-88 327.4 214 74.3
Oeu013867.1 Olea europaea HOM05D004202 ORTHO05D005021 9.7e-88 327.4 252 69.0
DCAR_025511 Daucus carota HOM05D004202 ORTHO05D005021 1.3e-87 327.0 223 70.4
AL3G28480 Arabidopsis lyrata HOM05D004202 ORTHO05D005021 2.2e-87 326.2 214 73.4
BraA05t22181Z Brassica rapa HOM05D004202 ORTHO05D005021 2.2e-87 326.2 216 73.1
Gohir.A06G185500 Gossypium hirsutum HOM05D004202 ORTHO05D005021 2.2e-87 326.2 218 71.6
BcaC05g28930 Brassica carinata HOM05D004202 ORTHO05D005021 2.8e-87 325.9 220 71.8
C05p50570 Brassica napus HOM05D004202 ORTHO05D005021 2.8e-87 325.9 220 71.8
ECA232G2164 Erigeron canadensis HOM05D004202 ORTHO05D005021 4.8e-87 325.1 216 71.8
ClCG07G012460 Citrullus lanatus HOM05D004202 ORTHO05D005021 6.3e-87 324.7 217 70.0
Ciclev10026224m.g Citrus clementina HOM05D004202 ORTHO05D005021 6.3e-87 324.7 224 71.0
Ah.01g020590 Amaranthus hybridus HOM05D004202 ORTHO05D005021 1.1e-86 323.9 214 73.8
Carub.0003s1556 Capsella rubella HOM05D004202 ORTHO05D005021 1.1e-86 323.9 214 72.9
CsaV3_4G001700 Cucumis sativus L. HOM05D004202 ORTHO05D005021 1.1e-86 323.9 218 68.3
Gorai.010G225300 Gossypium raimondii HOM05D004202 ORTHO05D005021 1.1e-86 323.9 218 70.6
Sp3g14140 Schrenkiella parvula HOM05D004202 ORTHO05D005021 1.1e-86 323.9 218 71.1
BcaB06g25690 Brassica carinata HOM05D004202 ORTHO05D005021 1.4e-86 323.6 218 72.0
BolC5t33802H Brassica oleracea HOM05D004202 ORTHO05D005021 1.4e-86 323.6 220 71.4
Aqoxy7G02289 Aquilegia oxysepala HOM05D004202 ORTHO05D005021 1.8e-86 323.2 215 71.2
BcaC01g03855 Brassica carinata HOM05D004202 ORTHO05D005021 5.3e-86 321.6 218 71.6
A03p39480 Brassica napus HOM05D004202 ORTHO05D005021 5.3e-86 321.6 218 71.6
C03p47880 Brassica napus HOM05D004202 ORTHO05D005021 5.3e-86 321.6 218 71.6
BolC3t17065H Brassica oleracea HOM05D004202 ORTHO05D005021 5.3e-86 321.6 218 71.6
BraA03t13098Z Brassica rapa HOM05D004202 ORTHO05D005021 5.3e-86 321.6 218 71.6
Cpa.g.sc10.268 Carica papaya HOM05D004202 ORTHO05D005021 5.3e-86 321.6 215 71.2
Gohir.D06G192100 Gossypium hirsutum HOM05D004202 ORTHO05D005021 5.3e-86 321.6 218 70.2
HanXRQChr16g0500411 Helianthus annuus HOM05D004202 ORTHO05D005021 2.6e-85 319.3 209 71.3
Sc10g0008080 Simmondsia chinensis HOM05D004202 ORTHO05D005021 2.6e-85 319.3 220 69.1
Sabra03G0018400 Salix brachista HOM05D004202 ORTHO05D005021 3.4e-85 318.9 229 69.0
MELO3C017864.2 Cucumis melo HOM05D004202 ORTHO05D005021 4.5e-85 318.5 218 68.3
Duzib192G0312 Durio zibethinus HOM05D004202 ORTHO05D005021 4.5e-85 318.5 225 69.8
Sc10g0005940 Simmondsia chinensis HOM05D004202 ORTHO05D005021 1.3e-84 317.0 213 72.3
Lj3g0004144 Lotus japonicus HOM05D004202 ORTHO05D005021 3.8e-84 315.5 240 65.8
unitig_699.g19094 Utricularia gibba HOM05D004202 ORTHO05D005021 1.1e-83 313.9 226 68.1
EL10Ac9g21900 Beta vulgaris HOM05D004202 ORTHO05D005021 1.4e-83 313.5 213 70.0
AUR62011519 Chenopodium quinoa HOM05D004202 ORTHO05D005021 1.9e-83 313.2 228 65.4
BcaB04g20901 Brassica carinata HOM05D004202 ORTHO05D005021 3.2e-83 312.4 213 71.8
AUR62016337 Chenopodium quinoa HOM05D004202 ORTHO05D005021 3.2e-83 312.4 214 67.8
BolC1t04818H Brassica oleracea HOM05D004202 ORTHO05D005021 2.1e-82 309.7 215 71.2
BcaC09g48559 Brassica carinata HOM05D004202 ORTHO05D005021 4.6e-82 308.5 219 69.4
C01p48640 Brassica napus HOM05D004202 ORTHO05D005021 4.6e-82 308.5 219 69.4
PSO170G3116 Papaver somniferum HOM05D004202 ORTHO05D005021 6.1e-82 308.1 216 66.2
Carub.0003s1557 Capsella rubella HOM05D004202 ORTHO05D005021 7.9e-82 307.8 214 68.2
AL3G28490 Arabidopsis lyrata HOM05D004202 ORTHO05D005021 1.4e-81 307.0 214 69.6
PSO017G2363 Papaver somniferum HOM05D004202 ORTHO05D005021 1.8e-81 306.6 216 66.7
AT3G15830 Arabidopsis thaliana HOM05D004202 ORTHO05D005021 5.1e-81 305.1 214 69.2
BraA01t03881Z Brassica rapa HOM05D004202 ORTHO05D005021 5.1e-81 305.1 215 70.2
A01p38300 Brassica napus HOM05D004202 ORTHO05D005021 6.7e-81 304.7 212 71.2
Gohir.A05G123350 Gossypium hirsutum HOM05D004202 ORTHO05D005021 9.7e-80 300.8 213 68.5
Gohir.D05G124300 Gossypium hirsutum HOM05D004202 ORTHO05D005021 3.7e-79 298.9 224 64.3
GSVIVG01017341001 Vitis vinifera HOM05D004202 ORTHO05D005021 3.7e-79 298.9 188 75.5
Gorai.009G128300 Gossypium raimondii HOM05D004202 ORTHO05D005021 1.8e-78 296.6 224 64.3
Cc04_g04400 Coffea canephora HOM05D004202 ORTHO05D005021 1.2e-77 293.9 169 82.8
CARHR090920 Cardamine hirsuta HOM05D004202 ORTHO05D005021 2.6e-77 292.7 214 67.8
MBI04_g42944_MAGBIO Magnolia biondii HOM05D004202 ORTHO05D005021 5.9e-77 291.6 178 77.5
Aqoxy4G02272 Aquilegia oxysepala HOM05D004202 ORTHO05D005021 7.7e-77 291.2 216 63.0
HPP92_023144 Vanilla planifolia HOM05D004202 ORTHO05D005021 1.1e-75 287.3 204 68.1
Thhalv10015624m.g Eutrema salsugineum HOM05D004202 ORTHO05D005021 4.2e-75 285.4 214 63.6
CDE07G1814 Ceratophyllum demersum HOM05D004202 ORTHO05D005021 4.7e-74 282.0 232 59.5
BcaB05g22200 Brassica carinata HOM05D004202 ORTHO05D005021 7.9e-74 281.2 212 63.2
A02p09730 Brassica napus HOM05D004202 ORTHO05D005021 1.0e-73 280.8 212 62.7
BraA02t06038Z Brassica rapa HOM05D004202 ORTHO05D005021 1.0e-73 280.8 212 62.7
BcaC03g14245 Brassica carinata HOM05D004202 ORTHO05D005021 2.3e-73 279.6 212 62.3
C02p16260 Brassica napus HOM05D004202 ORTHO05D005021 2.3e-73 279.6 212 62.3
BolC2t07727H Brassica oleracea HOM05D004202 ORTHO05D005021 2.3e-73 279.6 212 62.3
Lj3g0021663 Lotus japonicus HOM05D004202 ORTHO05D005021 8.8e-73 277.7 219 64.8
Os06g0607100 Oryza sativa ssp. japonica HOM05D004202 ORTHO05D005021 1.9e-67 260.0 203 62.6
Lsat_1_v5_gn_1_34380 Lactuca sativa HOM05D004202 ORTHO05D005021 1.2e-64 250.8 218 58.3
Oeu042081.1 Olea europaea HOM05D004202 ORTHO05D005021 8.5e-60 234.6 197 68.0
Mapoly0019s0013 Marchantia polymorpha HOM05D004202 ORTHO05D005021 3.2e-59 232.6 201 56.2
Sabra01G0157700 Salix brachista HOM05D004202 ORTHO05D005021 9.4e-59 231.1 224 56.7
Thecc.06G024300 Theobroma cacao HOM05D004202 ORTHO05D005021 8.0e-58 228.0 149 75.8
FAN02G2528 Fragaria x ananassa HOM05D004202 ORTHO05D005021 1.4e-57 227.3 280 49.3
Thecc.06G024700 Theobroma cacao HOM05D004202 ORTHO05D005021 2.3e-57 226.5 149 75.2
Lalb_Chr25g0279291 Lupinus albus HOM05D004202 ORTHO05D005021 5.4e-54 215.3 135 75.6
Sp6g17250 Schrenkiella parvula HOM05D004202 ORTHO05D005021 7.0e-54 214.9 212 53.8
Pp3c20_11410 Physcomitrium patens HOM05D004202 ORTHO05D005021 5.5e-51 205.3 211 47.9
BcaB01g04346 Brassica carinata HOM05D004202 ORTHO05D005021 9.8e-48 194.5 211 49.3
Actinidia15761 Actinidia chinensis HOM05D004202 ORTHO05D005021 1.2e-45 187.6 147 60.5
Pp3c8_10870 Physcomitrium patens HOM05D004202 ORTHO05D005021 9.5e-43 177.9 167 49.7
Nitab4.5_0000373g0050 Nicotiana tabacum HOM05D004202 ORTHO05D005021 4.9e-31 139.0 95 76.8
Nitab4.5_0000373g0060 Nicotiana tabacum HOM05D004202 ORTHO05D005021 2.1e-21 107.1 74 62.2
Lalb_Chr25g0279281 Lupinus albus HOM05D004202 ORTHO05D005021 4.6e-21 105.9 76 63.2
AagrBONN_evm.TU.Sc2ySwM_228.136 Anthoceros agrestis HOM05D004202 ORTHO05D005021 1.1e-14 84.7 89 48.3
Zm00001eb386530 Zea mays HOM05D004202 ORTHO05D005021 1.9e-14 84.0 74 51.4
Lj5P198T82 Lonicera japonica HOM05D004202 ORTHO05D005021 7.8e-13 78.6 65 55.4
Lj5P204T31 Lonicera japonica HOM05D004202 ORTHO05D005021 6.6e-12 75.5 72 54.2
Nn5g27834 Nelumbo nucifera HOM05D004202 ORTHO05D005021 5.8e-08 62.4 40 67.5
QL03p052981 Quercus lobata HOM05D004202 ORTHO05D005021 1.3e-07 61.2 44 63.6
BcaB08g35892 Brassica carinata HOM05D004202 ORTHO05D096023 2.9e-07 60.1 79 45.6


User provided reference genes

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