Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 0.0e+00 1343.9 710 100.0
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 5.1e-219 765.0 667 64.6
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 4.0e-216 755.4 664 64.2
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.6e-212 743.4 666 63.2
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.7e-212 742.7 666 63.2
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.8e-206 722.2 667 61.5
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 1.5e-202 710.3 668 61.4
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 1.6e-201 706.8 660 60.2
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 9.0e-200 701.0 664 61.1
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 5.5e-197 691.8 662 59.7
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.1e-196 689.9 685 59.4
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 1.0e-195 687.6 661 59.8
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 4.3e-194 682.2 663 59.0
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 7.4e-194 681.4 660 59.2
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 8.2e-193 677.9 663 58.8
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 1.1e-192 677.6 664 58.9
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 2.9e-190 669.5 663 59.0
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 6.5e-190 668.3 659 59.2
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 1.4e-189 667.2 663 60.2
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.9e-189 666.8 660 58.8
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.6e-188 663.7 665 58.5
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 2.1e-188 663.3 660 57.4
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.6e-188 662.1 643 60.2
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 1.4e-187 660.6 663 58.2
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 2.3e-187 659.8 665 58.2
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 5.7e-186 655.2 662 58.0
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 1.3e-185 654.1 661 57.0
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 2.8e-185 652.9 682 56.6
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 5.3e-184 648.7 664 57.7
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 5.3e-184 648.7 690 57.4
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 1.2e-183 647.5 685 56.1
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 4.5e-183 645.6 661 56.6
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.3e-182 644.0 635 58.7
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 1.7e-182 643.7 664 57.1
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 2.2e-182 643.3 695 55.0
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 1.6e-180 637.1 656 56.2
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 2.1e-180 636.7 655 56.5
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.8e-179 633.6 722 53.5
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.0e-179 632.9 613 60.0
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 3.0e-179 632.9 659 56.0
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 1.1e-178 630.9 667 57.3
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 1.3e-177 627.5 655 56.3
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 4.8e-177 625.5 646 56.5
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 3.1e-176 622.9 654 54.6
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 2.0e-175 620.2 653 55.3
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 1.7e-174 617.1 655 55.1
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 2.5e-173 613.2 659 55.1
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 3.2e-173 612.8 641 55.7
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 4.2e-173 612.5 659 55.2
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 9.4e-173 611.3 673 52.9
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 3.6e-172 609.4 652 55.4
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 4.7e-172 609.0 685 53.6
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 8.0e-172 608.2 685 53.6
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 4.4e-170 602.4 627 56.3
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 7.0e-168 595.1 664 54.1
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 1.3e-166 590.9 697 49.9
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 1.7e-166 590.5 654 53.5
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 2.2e-166 590.1 802 47.8
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 5.4e-160 568.9 669 52.3
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 2.0e-159 567.0 770 47.3
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 1.7e-158 563.9 673 51.4
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 2.8e-156 556.6 668 49.9
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 1.8e-155 553.9 538 58.9
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 6.8e-155 552.0 608 53.6
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 2.8e-153 546.6 663 51.4
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 9.2e-152 541.6 660 50.8
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 2.3e-150 537.0 665 51.6
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 6.6e-150 535.4 659 49.8
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 1.2e-148 531.2 666 49.8
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 8.0e-148 528.5 661 49.8
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 2.0e-146 523.9 693 47.2
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 1.3e-145 521.2 537 57.0
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 8.3e-145 518.5 693 47.2
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 4.1e-144 516.2 693 47.2
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 4.1e-144 516.2 630 50.3
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 5.4e-144 515.8 654 48.8
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 7.0e-144 515.4 609 50.7
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 2.3e-142 510.4 714 46.2
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 1.5e-141 507.7 694 47.0
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 3.1e-139 500.0 718 45.8
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 3.2e-136 490.0 656 46.5
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 4.1e-136 489.6 658 47.7
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 5.4e-136 489.2 464 59.7
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.6e-135 486.1 432 63.7
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 2.3e-134 483.8 537 52.7
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 3.0e-134 483.4 511 56.9
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 3.7e-129 466.5 683 44.7
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 1.4e-128 464.5 459 58.4
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 1.2e-127 461.5 657 47.3
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 1.9e-125 454.1 486 54.9
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 7.6e-122 442.2 671 42.8
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 6.6e-118 429.1 721 40.9
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 1.1e-115 421.8 661 43.4
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.9e-112 411.0 682 39.7
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 2.5e-109 400.6 660 41.2
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 2.8e-108 397.1 670 39.9
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 5.1e-102 376.3 659 39.6
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.8e-99 367.9 429 53.8
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 3.1e-99 367.1 501 47.7
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 1.7e-89 334.7 513 44.2
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.7e-89 334.7 467 47.5
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 4.1e-83 313.5 854 32.0
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 1.5e-74 285.0 341 51.3
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.7e-73 281.6 215 67.9
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.0e-70 270.8 282 58.2
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 4.4e-69 266.9 511 36.2
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 5.7e-61 240.0 165 74.5
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 1.1e-59 235.7 270 54.8
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 9.4e-56 222.6 813 28.3
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 1.6e-55 221.9 153 75.2
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 1.6e-55 221.9 215 57.2
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 3.3e-53 214.2 150 76.7
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 2.5e-48 198.0 750 28.7
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.2e-45 189.1 221 49.8
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 3.1e-43 181.0 197 53.8
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 8.6e-33 146.4 328 34.8
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 1.9e-32 145.2 78 92.3
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 2.5e-32 144.8 205 44.4
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 9.2e-27 126.3 101 65.3
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.9e-19 102.1 94 63.8
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.2e-19 101.3 91 64.8
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.7e-18 98.2 90 66.7
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 2.3e-14 85.1 52 75.0
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 4.0e-14 84.3 99 47.5
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 1.3e-12 79.3 47 83.0
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-10 72.0 126 38.9
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 5.1e-09 67.4 90 42.2
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.5e-08 65.9 101 38.6
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 1.2e-07 62.8 50 68.0


User provided reference genes

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