Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013772.1 Olea europaea HOM05D006153 ORTHO05D007701 6.7e-53 210.3 98 100.0
Manes.07G064400 Manihot esculenta HOM05D006153 ORTHO05D007701 1.7e-16 89.4 102 40.2
Duzib132G0541 Durio zibethinus HOM05D006153 ORTHO05D007701 9.4e-15 83.6 72 47.2
Cpa.g.sc200.7 Carica papaya HOM05D006153 ORTHO05D007701 2.7e-14 82.0 95 40.0
Peaxi162Scf00152g00320 Petunia axillaris HOM05D006153 ORTHO05D007701 3.6e-14 81.6 89 47.2
Potri.001G296900 Populus trichocarpa HOM05D006153 ORTHO05D007701 3.6e-14 81.6 46 63.0
Duzib052G0610 Durio zibethinus HOM05D006153 ORTHO05D007701 6.1e-14 80.9 56 53.6
TAR381G0917 Trochodendron aralioides HOM05D006153 ORTHO05D007701 6.1e-14 80.9 88 45.5
BcaC05g28465 Brassica carinata HOM05D006153 ORTHO05D007701 8.0e-14 80.5 95 42.1
arahy.Tifrunner.gnm1.ann1.EHR7LK Arachis hypogaea HOM05D006153 ORTHO05D007701 1.0e-13 80.1 47 61.7
Glyma.10G259200 Glycine max HOM05D006153 ORTHO05D007701 1.0e-13 80.1 49 59.2
COL.COLO4_32545 Corchorus olitorius HOM05D006153 ORTHO05D007701 1.4e-13 79.7 51 56.9
Lalb_Chr06g0165291 Lupinus albus HOM05D006153 ORTHO05D007701 1.4e-13 79.7 59 50.8
CSS0010428 Camellia sinensis var. sinensis HOM05D006153 ORTHO05D007701 1.8e-13 79.3 66 47.0
Phvul.007G043000 Phaseolus vulgaris HOM05D006153 ORTHO05D007701 1.8e-13 79.3 49 61.2
Thecc.02G113400 Theobroma cacao HOM05D006153 ORTHO05D007701 1.8e-13 79.3 85 42.4
A01p35130 Brassica napus HOM05D006153 ORTHO05D007701 2.3e-13 79.0 95 40.0
C05p45510 Brassica napus HOM05D006153 ORTHO05D007701 2.3e-13 79.0 95 41.1
BolC5t33274H Brassica oleracea HOM05D006153 ORTHO05D007701 2.3e-13 79.0 95 41.1
BraA01t03595Z Brassica rapa HOM05D006153 ORTHO05D007701 2.3e-13 79.0 95 40.0
Thhalv10021914m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 2.3e-13 79.0 98 39.8
Dinv15786 Davidia involucrata HOM05D006153 ORTHO05D007701 3.0e-13 78.6 80 45.0
Glyma.20G131700 Glycine max HOM05D006153 ORTHO05D007701 3.0e-13 78.6 49 59.2
Sc14g0002580 Simmondsia chinensis HOM05D006153 ORTHO05D007701 3.0e-13 78.6 56 51.8
ATR0030G019 Amborella trichopoda HOM05D006153 ORTHO05D007701 4.0e-13 78.2 64 50.0
A05p30090 Brassica napus HOM05D006153 ORTHO05D007701 4.0e-13 78.2 95 41.1
BraA05t21849Z Brassica rapa HOM05D006153 ORTHO05D007701 4.0e-13 78.2 95 41.1
Gohir.A01G008400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 4.0e-13 78.2 83 37.3
Lalb_Chr02g0145121 Lupinus albus HOM05D006153 ORTHO05D007701 4.0e-13 78.2 47 59.6
BcaB06g26014 Brassica carinata HOM05D006153 ORTHO05D007701 5.2e-13 77.8 70 50.0
Thhalv10021904m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 5.2e-13 77.8 49 63.3
QL11p031990 Quercus lobata HOM05D006153 ORTHO05D007701 5.2e-13 77.8 50 54.0
Dinv42217 Davidia involucrata HOM05D006153 ORTHO05D007701 6.8e-13 77.4 88 40.9
Nitab4.5_0004685g0060 Nicotiana tabacum HOM05D006153 ORTHO05D007701 6.8e-13 77.4 78 50.0
Sabra16G0186000 Salix brachista HOM05D006153 ORTHO05D007701 6.8e-13 77.4 72 44.4
Sp3g17600 Schrenkiella parvula HOM05D006153 ORTHO05D007701 6.8e-13 77.4 49 61.2
VMungo0720G0345 Vigna mungo HOM05D006153 ORTHO05D007701 6.8e-13 77.4 49 59.2
CANSAT25G0942 Cannabis sativa HOM05D006153 ORTHO05D007701 1.2e-12 76.6 57 52.6
Peaxi162Scf00016g00267 Petunia axillaris HOM05D006153 ORTHO05D007701 1.2e-12 76.6 95 42.1
Haze_10299 Corylus avellana HOM05D006153 ORTHO05D007701 1.5e-12 76.3 54 51.9
Lj5g0020623 Lotus japonicus HOM05D006153 ORTHO05D007701 1.5e-12 76.3 67 43.3
Nn5g30510 Nelumbo nucifera HOM05D006153 ORTHO05D007701 1.5e-12 76.3 50 54.0
Nitab4.5_0012681g0010 Nicotiana tabacum HOM05D006153 ORTHO05D007701 1.5e-12 76.3 53 54.7
Peaxi162Scf00003g00261 Petunia axillaris HOM05D006153 ORTHO05D007701 1.5e-12 76.3 47 59.6
GSVIVG01037871001 Vitis vinifera HOM05D006153 ORTHO05D007701 1.5e-12 76.3 63 46.0
BcaB04g20696 Brassica carinata HOM05D006153 ORTHO05D007701 2.0e-12 75.9 95 37.9
Gohir.D13G044400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 2.0e-12 75.9 90 40.0
Gorai.013G049200 Gossypium raimondii HOM05D006153 ORTHO05D007701 2.0e-12 75.9 90 40.0
Nitab4.5_0001105g0220 Nicotiana tabacum HOM05D006153 ORTHO05D007701 2.0e-12 75.9 46 65.2
Nitab4.5_0002017g0030 Nicotiana tabacum HOM05D006153 ORTHO05D007701 2.0e-12 75.9 52 53.8
BcaC09g48920 Brassica carinata HOM05D006153 ORTHO05D007701 2.6e-12 75.5 94 39.4
C01p44580 Brassica napus HOM05D006153 ORTHO05D007701 2.6e-12 75.5 94 39.4
Migut.I00275 Erythranthe guttata HOM05D006153 ORTHO05D007701 2.6e-12 75.5 45 66.7
Actinidia34374 Actinidia chinensis HOM05D006153 ORTHO05D007701 3.4e-12 75.1 94 38.3
Aqoxy6G02752 Aquilegia oxysepala HOM05D006153 ORTHO05D007701 3.4e-12 75.1 62 48.4
A01p35140 Brassica napus HOM05D006153 ORTHO05D007701 3.4e-12 75.1 46 60.9
BolC1t04422H Brassica oleracea HOM05D006153 ORTHO05D007701 3.4e-12 75.1 94 39.4
Sed0025917 Sechium edule HOM05D006153 ORTHO05D007701 3.4e-12 75.1 75 42.7
GSVIVG01037873001 Vitis vinifera HOM05D006153 ORTHO05D007701 3.4e-12 75.1 92 37.0
AT3G19550 Arabidopsis thaliana HOM05D006153 ORTHO05D007701 4.4e-12 74.7 94 38.3
Gorai.002G009800 Gossypium raimondii HOM05D006153 ORTHO05D007701 4.4e-12 74.7 77 37.7
Manes.10G074900 Manihot esculenta HOM05D006153 ORTHO05D007701 4.4e-12 74.7 62 48.4
PGR042G3678 Punica granatum HOM05D006153 ORTHO05D007701 4.4e-12 74.7 89 42.7
Solyc01g107280.3 Solanum lycopersicum HOM05D006153 ORTHO05D007701 5.7e-12 74.3 78 44.9
GSVIVG01037872001 Vitis vinifera HOM05D006153 ORTHO05D007701 5.7e-12 74.3 59 47.5
AL3G32960 Arabidopsis lyrata HOM05D006153 ORTHO05D007701 7.5e-12 73.9 49 57.1
BraA01t03596Z Brassica rapa HOM05D006153 ORTHO05D007701 7.5e-12 73.9 95 38.9
Eucgr.G00438 Eucalyptus grandis HOM05D006153 ORTHO05D007701 7.5e-12 73.9 56 51.8
HanXRQChr13g0425861 Helianthus annuus HOM05D006153 ORTHO05D007701 7.5e-12 73.9 43 62.8
TWI23G0900 Tripterygium wilfordii HOM05D006153 ORTHO05D007701 7.5e-12 73.9 56 51.8
HanXRQChr16g0514451 Helianthus annuus HOM05D006153 ORTHO05D007701 9.8e-12 73.6 46 58.7
QL11p029270 Quercus lobata HOM05D006153 ORTHO05D007701 9.8e-12 73.6 87 36.8
CARHR094970 Cardamine hirsuta HOM05D006153 ORTHO05D007701 1.3e-11 73.2 98 37.8
Lsat_1_v5_gn_5_114460 Lactuca sativa HOM05D006153 ORTHO05D007701 1.3e-11 73.2 46 56.5
Potri.009G091100 Populus trichocarpa HOM05D006153 ORTHO05D007701 1.3e-11 73.2 52 55.8
BcaB04g20697 Brassica carinata HOM05D006153 ORTHO05D007701 1.7e-11 72.8 95 38.9
Cfa004694 Carpinus fangiana HOM05D006153 ORTHO05D007701 1.7e-11 72.8 49 49.0
Haze_10289 Corylus avellana HOM05D006153 ORTHO05D007701 1.7e-11 72.8 88 33.0
HanXRQChr16g0514461 Helianthus annuus HOM05D006153 ORTHO05D007701 1.7e-11 72.8 59 50.8
Sopen01g049530 Solanum pennellii HOM05D006153 ORTHO05D007701 2.2e-11 72.4 69 46.4
Ciclev10029838m.g Citrus clementina HOM05D006153 ORTHO05D007701 2.8e-11 72.0 65 49.2
Carub.0003s1938 Capsella rubella HOM05D006153 ORTHO05D007701 3.7e-11 71.6 50 54.0
Hma1.2p1_1174F.1_g263880 Hydrangea macrophylla HOM05D006153 ORTHO05D007701 3.7e-11 71.6 54 51.9
MD10G1102200 Malus domestica HOM05D006153 ORTHO05D007701 3.7e-11 71.6 61 52.5
HanXRQChr16g0514921 Helianthus annuus HOM05D006153 ORTHO05D007701 4.8e-11 71.2 96 40.6
CiPaw.05G015200 Carya illinoinensis HOM05D006153 ORTHO05D007701 6.3e-11 70.9 60 46.7
ClCG02G006680 Citrullus lanatus HOM05D006153 ORTHO05D007701 8.3e-11 70.5 91 38.5
Lj1g0020403 Lotus japonicus HOM05D006153 ORTHO05D007701 8.3e-11 70.5 49 55.1
PSO541G5112 Papaver somniferum HOM05D006153 ORTHO05D007701 8.3e-11 70.5 70 45.7
Prupe.8G140400 Prunus persica HOM05D006153 ORTHO05D007701 8.3e-11 70.5 69 49.3
MELO3C018509.2 Cucumis melo HOM05D006153 ORTHO05D007701 1.4e-10 69.7 93 38.7
Rhsim05G0089900 Rhododendron simsii HOM05D006153 ORTHO05D007701 1.4e-10 69.7 46 63.0
Lj5g0024415 Lotus japonicus HOM05D006153 ORTHO05D007701 1.8e-10 69.3 48 56.2
MD05G1096000 Malus domestica HOM05D006153 ORTHO05D007701 1.8e-10 69.3 47 59.6
PGSC0003DMG400025850 Solanum tuberosum HOM05D006153 ORTHO05D007701 1.8e-10 69.3 67 44.8
Aa31LG8G6290 Aethionema arabicum HOM05D006153 ORTHO05D007701 2.4e-10 68.9 56 48.2
CsaV3_7G007950 Cucumis sativus L. HOM05D006153 ORTHO05D007701 2.4e-10 68.9 91 38.5
SGA_v2.0_scaffold624G53237 Striga asiatica HOM05D006153 ORTHO05D007701 2.4e-10 68.9 99 39.4
Os12g0507700 Oryza sativa ssp. japonica HOM05D006153 ORTHO05D007701 3.1e-10 68.6 64 43.8
HanXRQChr16g0514901 Helianthus annuus HOM05D006153 ORTHO05D007701 4.1e-10 68.2 96 39.6
ECA234G4313 Erigeron canadensis HOM05D006153 ORTHO05D007701 5.4e-10 67.8 58 48.3
Sabra09G0070400 Salix brachista HOM05D006153 ORTHO05D007701 5.4e-10 67.8 94 35.1
Zm00001eb264740 Zea mays HOM05D006153 ORTHO05D007701 9.1e-10 67.0 37 62.2
Haze_10254 Corylus avellana HOM05D006153 ORTHO05D007701 1.6e-09 66.2 57 49.1
Medtr5g005180 Medicago truncatula HOM05D006153 ORTHO05D007701 1.6e-09 66.2 38 60.5
Zm00001eb138020 Zea mays HOM05D006153 ORTHO05D007701 2.0e-09 65.9 81 39.5
Hund06709 Selenicereus undatus HOM05D006153 ORTHO05D007701 2.7e-09 65.5 98 34.7
Actinidia27982 Actinidia chinensis HOM05D006153 ORTHO05D007701 3.5e-09 65.1 57 45.6
DCAR_001679 Daucus carota HOM05D006153 ORTHO05D007701 3.5e-09 65.1 78 38.5
DCAR_001674 Daucus carota HOM05D006153 ORTHO05D007701 5.9e-09 64.3 54 51.9
MBI16_g15146_MAGBIO Magnolia biondii HOM05D006153 ORTHO05D007701 7.7e-09 63.9 44 54.5
Psat4g228040 Pisum sativum HOM05D006153 ORTHO05D007701 1.0e-08 63.5 38 57.9
DCAR_003609 Daucus carota HOM05D006153 ORTHO05D007701 1.7e-08 62.8 53 47.2
FvH4_2g04480 Fragaria vesca HOM05D006153 ORTHO05D007701 1.7e-08 62.8 48 56.2
FAN24G1230 Fragaria x ananassa HOM05D006153 ORTHO05D007701 1.7e-08 62.8 48 56.2
ECA234G3366 Erigeron canadensis HOM05D006153 ORTHO05D007701 2.2e-08 62.4 72 34.7
AUR62027357 Chenopodium quinoa HOM05D006153 ORTHO05D007701 2.9e-08 62.0 68 33.8
FAN20G1027 Fragaria x ananassa HOM05D006153 ORTHO05D007701 2.9e-08 62.0 48 56.2
FAN27G0726 Fragaria x ananassa HOM05D006153 ORTHO05D007701 2.9e-08 62.0 48 56.2
AUR62031329 Chenopodium quinoa HOM05D006153 ORTHO05D007701 3.8e-08 61.6 63 39.7
RcHm_v2.0_Chr6g0253971 Rosa chinensis HOM05D006153 ORTHO05D007701 5.0e-08 61.2 48 56.2
TPR.G8325 Trifolium pratense HOM05D006153 ORTHO05D007701 6.5e-08 60.8 69 42.0
Cfa004655 Carpinus fangiana HOM05D006153 ORTHO05D007701 8.5e-08 60.5 55 47.3
Eucgr.G01281 Eucalyptus grandis HOM05D006153 ORTHO05D007701 8.5e-08 60.5 48 50.0
Ca_24350_v3 Cicer arietinum L. HOM05D006153 ORTHO05D007701 1.5e-07 59.7 42 52.4
FAN15G1936 Fragaria x ananassa HOM05D006153 ORTHO05D007701 1.5e-07 59.7 48 54.2
TAR383G0592 Trochodendron aralioides HOM05D008232 ORTHO05D010390 2.5e-07 58.9 39 61.5
EL10Ac8g19360 Beta vulgaris HOM05D006153 ORTHO05D007701 5.5e-07 57.8 51 43.1
Gohir.A13G045400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 3.6e-06 55.1 79 35.4
Potri.010G248600 Populus trichocarpa HOM05D008232 ORTHO05D010390 8.0e-06 53.9 57 45.6


User provided reference genes

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