Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013756.1 Olea europaea HOM05D003735 ORTHO05D004550 5.4e-300 1033.5 504 100.0
Oeu029527.5 Olea europaea HOM05D003735 ORTHO05D004550 3.6e-211 738.4 541 70.6
MSTRG.5338 Avicennia marina HOM05D003735 ORTHO05D004550 6.4e-200 701.0 502 69.3
SGA_v2.0_scaffold393G50713 Striga asiatica HOM05D003735 ORTHO05D004550 3.9e-197 691.8 500 68.4
SalBow3G2544 Salvia bowleyana HOM05D003735 ORTHO05D004550 4.3e-196 688.3 502 68.3
Migut.N01162 Erythranthe guttata HOM05D003735 ORTHO05D004550 2.8e-195 685.6 501 68.1
Peaxi162Scf00016g02426 Petunia axillaris HOM05D003735 ORTHO05D004550 2.6e-193 679.1 498 68.3
PGSC0003DMG400025861 Solanum tuberosum HOM05D003735 ORTHO05D004550 7.6e-193 677.6 504 67.9
Nitab4.5_0011634g0020 Nicotiana tabacum HOM05D003735 ORTHO05D004550 9.9e-193 677.2 512 67.2
Dinv15769 Davidia involucrata HOM05D003735 ORTHO05D004550 1.3e-192 676.8 498 67.3
CAN.G606.4 Capsicum annuum HOM05D003735 ORTHO05D004550 2.9e-192 675.6 498 68.1
Cc02_g19320 Coffea canephora HOM05D003735 ORTHO05D004550 6.4e-192 674.5 498 67.1
Sopen01g049750 Solanum pennellii HOM05D003735 ORTHO05D004550 1.4e-191 673.3 504 67.1
Solyc01g107550.3 Solanum lycopersicum HOM05D003735 ORTHO05D004550 1.9e-191 672.9 504 67.1
CSS0013486 Camellia sinensis var. sinensis HOM05D003735 ORTHO05D004550 4.6e-190 668.3 502 66.9
Lj9A323T50 Lonicera japonica HOM05D003735 ORTHO05D004550 5.1e-189 664.8 500 66.4
MSTRG.27746 Avicennia marina HOM05D003735 ORTHO05D004550 7.4e-188 661.0 504 65.3
Rhsim11G0159300 Rhododendron simsii HOM05D003735 ORTHO05D004550 1.3e-187 660.2 498 66.5
Rhsim11G0159400 Rhododendron simsii HOM05D003735 ORTHO05D004550 1.6e-187 659.8 498 66.1
vmacro01999 Vaccinium macrocarpon HOM05D003735 ORTHO05D004550 1.4e-186 656.8 498 66.7
Actinidia00406 Actinidia chinensis HOM05D003735 ORTHO05D004550 3.1e-186 655.6 498 65.9
Gohir.A12G021500 Gossypium hirsutum HOM05D003735 ORTHO05D004550 4.0e-186 655.2 498 65.1
Gohir.D12G022000 Gossypium hirsutum HOM05D003735 ORTHO05D004550 3.4e-185 652.1 498 65.1
Dinv42198 Davidia involucrata HOM05D003735 ORTHO05D004550 5.8e-185 651.4 502 64.5
Gorai.008G022500 Gossypium raimondii HOM05D003735 ORTHO05D004550 9.9e-185 650.6 498 65.1
Gorai.008G022400 Gossypium raimondii HOM05D003735 ORTHO05D004550 1.3e-184 650.2 498 64.7
COL.COLO4_32583 Corchorus olitorius HOM05D003735 ORTHO05D004550 1.1e-183 647.1 497 65.4
Duzib132G0856 Durio zibethinus HOM05D003735 ORTHO05D004550 1.9e-183 646.4 520 62.5
Potri.009G094800 Populus trichocarpa HOM05D003735 ORTHO05D004550 1.9e-183 646.4 498 64.1
Manes.07G071116 Manihot esculenta HOM05D003735 ORTHO05D004550 5.5e-183 644.8 497 64.0
Manes.07G071000 Manihot esculenta HOM05D003735 ORTHO05D004550 7.1e-183 644.4 497 64.2
Thecc.02G109200 Theobroma cacao HOM05D003735 ORTHO05D004550 7.1e-183 644.4 497 64.6
Duzib248G1182 Durio zibethinus HOM05D003735 ORTHO05D004550 9.3e-183 644.0 497 64.6
Manes.07G071100 Manihot esculenta HOM05D003735 ORTHO05D004550 1.2e-182 643.7 497 63.6
Cpa.g.sc106.101 Carica papaya HOM05D003735 ORTHO05D004550 6.0e-182 641.3 498 63.7
Sabra09G0073100 Salix brachista HOM05D003735 ORTHO05D004550 6.0e-182 641.3 498 64.1
Ciclev10028518m.g Citrus clementina HOM05D003735 ORTHO05D004550 7.9e-182 641.0 497 64.6
Sabra09G0072900 Salix brachista HOM05D003735 ORTHO05D004550 1.0e-181 640.6 498 64.1
GSVIVG01037915001 Vitis vinifera HOM05D003735 ORTHO05D004550 1.0e-181 640.6 498 64.5
Hma1.2p1_0796F.1_g219280 Hydrangea macrophylla HOM05D003735 ORTHO05D004550 1.8e-181 639.8 502 63.7
Atru.chr5.2510 Acer truncatum HOM05D003735 ORTHO05D004550 2.3e-181 639.4 497 65.2
AUR62025585 Chenopodium quinoa HOM05D003735 ORTHO05D004550 5.1e-181 638.3 501 63.9
Hund06312 Selenicereus undatus HOM05D003735 ORTHO05D004550 8.7e-181 637.5 501 63.9
Thecc.02G109600 Theobroma cacao HOM05D003735 ORTHO05D004550 3.3e-180 635.6 514 63.2
arahy.Tifrunner.gnm1.ann1.28YLK9 Arachis hypogaea HOM05D003735 ORTHO05D004550 7.4e-180 634.4 502 62.2
CANSAT25G2742 Cannabis sativa HOM05D003735 ORTHO05D004550 7.4e-180 634.4 497 64.6
unitig_747.g21222 Utricularia gibba HOM05D003735 ORTHO05D004550 7.4e-180 634.4 499 63.5
arahy.Tifrunner.gnm1.ann1.SBY3PD Arachis hypogaea HOM05D003735 ORTHO05D004550 1.3e-179 633.6 502 62.2
CiPaw.05G012200 Carya illinoinensis HOM05D003735 ORTHO05D004550 2.1e-179 632.9 498 62.4
Cfa004592 Carpinus fangiana HOM05D003735 ORTHO05D004550 1.1e-178 630.6 502 62.7
Potri.001G299700 Populus trichocarpa HOM05D003735 ORTHO05D004550 1.1e-178 630.6 498 62.9
Lj5g0001181 Lotus japonicus HOM05D003735 ORTHO05D004550 4.0e-178 628.6 500 62.4
EL10Ac9g22264 Beta vulgaris HOM05D003735 ORTHO05D004550 1.2e-177 627.1 496 63.7
Nn5g30431 Nelumbo nucifera HOM05D003735 ORTHO05D004550 1.5e-177 626.7 498 61.6
AUR62001369 Chenopodium quinoa HOM05D003735 ORTHO05D004550 2.0e-177 626.3 501 62.9
ClCG05G010320 Citrullus lanatus HOM05D003735 ORTHO05D004550 3.4e-177 625.5 497 62.4
MD10G1147300 Malus domestica HOM05D003735 ORTHO05D004550 3.4e-177 625.5 497 63.6
Haze_10183 Corylus avellana HOM05D003735 ORTHO05D004550 4.5e-177 625.2 498 62.2
Glyma.10G261300 Glycine max HOM05D003735 ORTHO05D004550 4.5e-177 625.2 500 61.8
PGR142G3714 Punica granatum HOM05D003735 ORTHO05D004550 4.5e-177 625.2 497 63.0
CiPaw.05G012300 Carya illinoinensis HOM05D003735 ORTHO05D004550 5.8e-177 624.8 498 62.0
Phvul.007G040800 Phaseolus vulgaris HOM05D003735 ORTHO05D004550 1.0e-176 624.0 497 62.4
QL11p033367 Quercus lobata HOM05D003735 ORTHO05D004550 1.3e-176 623.6 502 61.6
Glyma.20G129700 Glycine max HOM05D003735 ORTHO05D004550 1.7e-176 623.2 500 62.0
TPR.G3239 Trifolium pratense HOM05D003735 ORTHO05D004550 1.7e-176 623.2 495 62.0
Medtr1g107235 Medicago truncatula HOM05D003735 ORTHO05D004550 3.8e-176 622.1 495 62.8
HanXRQChr10g0296961 Helianthus annuus HOM05D003735 ORTHO05D004550 4.9e-176 621.7 495 62.4
Lsat_1_v5_gn_5_115400 Lactuca sativa HOM05D003735 ORTHO05D004550 4.9e-176 621.7 499 62.5
MD10G1098700 Malus domestica HOM05D003735 ORTHO05D004550 4.9e-176 621.7 497 63.0
MELO3C019550.2 Cucumis melo HOM05D003735 ORTHO05D004550 6.5e-176 621.3 492 62.2
Eucgr.I01098 Eucalyptus grandis HOM05D003735 ORTHO05D004550 1.4e-175 620.2 495 62.6
DCAR_021982 Daucus carota HOM05D003735 ORTHO05D004550 1.9e-175 619.8 498 62.7
CsaV3_3G018170 Cucumis sativus L. HOM05D003735 ORTHO05D004550 3.2e-175 619.0 492 62.0
VMungo0720G1863 Vigna mungo HOM05D003735 ORTHO05D004550 3.2e-175 619.0 500 61.2
GSVIVG01037913001 Vitis vinifera HOM05D003735 ORTHO05D004550 3.2e-175 619.0 498 62.2
Phvul.007G040700 Phaseolus vulgaris HOM05D003735 ORTHO05D004550 4.2e-175 618.6 500 61.6
arahy.Tifrunner.gnm1.ann1.HR3ZI9 Arachis hypogaea HOM05D003735 ORTHO05D004550 9.3e-175 617.5 502 60.8
Haze_10190 Corylus avellana HOM05D003735 ORTHO05D004550 9.3e-175 617.5 517 60.7
BolC6t35561H Brassica oleracea HOM05D003735 ORTHO05D004550 2.1e-174 616.3 498 61.4
C06p04320 Brassica napus HOM05D003735 ORTHO05D004550 3.5e-174 615.5 498 61.2
BcaC08g43148 Brassica carinata HOM05D003735 ORTHO05D004550 4.6e-174 615.1 498 61.2
Lalb_Chr02g0145261 Lupinus albus HOM05D003735 ORTHO05D004550 7.9e-174 614.4 500 61.4
Psat6g217600 Pisum sativum HOM05D003735 ORTHO05D004550 7.9e-174 614.4 495 61.4
RcHm_v2.0_Chr6g0254911 Rosa chinensis HOM05D003735 ORTHO05D004550 1.0e-173 614.0 498 62.0
BraA06t23583Z Brassica rapa HOM05D003735 ORTHO05D004550 1.8e-173 613.2 498 61.0
A06p03780 Brassica napus HOM05D003735 ORTHO05D004550 2.3e-173 612.8 498 61.0
Prupe.8G136000 Prunus persica HOM05D003735 ORTHO05D004550 3.0e-173 612.5 498 61.6
Ca_11068_v3 Cicer arietinum L. HOM05D003735 ORTHO05D004550 1.1e-172 610.5 500 60.2
Psat6g217400 Pisum sativum HOM05D003735 ORTHO05D004550 1.1e-172 610.5 492 62.0
RcHm_v2.0_Chr2g0122061 Rosa chinensis HOM05D003735 ORTHO05D004550 1.1e-172 610.5 498 62.0
TWI75G1082 Tripterygium wilfordii HOM05D003735 ORTHO05D004550 1.9e-172 609.8 494 61.7
FvH4_2g05040 Fragaria vesca HOM05D003735 ORTHO05D004550 2.5e-172 609.4 498 61.6
TWI79G0069 Tripterygium wilfordii HOM05D003735 ORTHO05D004550 5.7e-172 608.2 500 61.6
AUR62039068 Chenopodium quinoa HOM05D003735 ORTHO05D004550 1.6e-171 606.7 497 62.0
THA.LOC104825376 Tarenaya hassleriana HOM05D003735 ORTHO05D004550 4.8e-171 605.1 498 59.8
FAN24G3115 Fragaria x ananassa HOM05D003735 ORTHO05D004550 8.2e-171 604.4 498 61.2
Gohir.D12G022100 Gossypium hirsutum HOM05D003735 ORTHO05D004550 8.2e-171 604.4 498 61.4
Sp1g36700 Schrenkiella parvula HOM05D003735 ORTHO05D004550 1.1e-170 604.0 498 59.8
Thhalv10011522m.g Eutrema salsugineum HOM05D003735 ORTHO05D004550 1.4e-170 603.6 498 60.6
Carub.0001s3903 Capsella rubella HOM05D003735 ORTHO05D004550 5.3e-170 601.7 498 61.2
CARHR039880 Cardamine hirsuta HOM05D003735 ORTHO05D004550 5.3e-170 601.7 499 60.3
FAN27G1495 Fragaria x ananassa HOM05D003735 ORTHO05D004550 5.3e-170 601.7 514 60.1
BcaB07g33662 Brassica carinata HOM05D003735 ORTHO05D004550 1.5e-169 600.1 499 59.9
Ca_11064_v3 Cicer arietinum L. HOM05D003735 ORTHO05D004550 1.5e-169 600.1 500 60.2
AT1G49820 Arabidopsis thaliana HOM05D003735 ORTHO05D004550 2.0e-169 599.7 500 60.6
FAN20G1457 Fragaria x ananassa HOM05D003735 ORTHO05D004550 5.9e-169 598.2 514 59.5
ECA234G0132 Erigeron canadensis HOM05D003735 ORTHO05D004550 7.6e-169 597.8 497 60.6
MBI16_g19654_MAGBIO Magnolia biondii HOM05D003735 ORTHO05D004550 7.6e-169 597.8 485 62.7
arahy.Tifrunner.gnm1.ann1.678ZZJ Arachis hypogaea HOM05D003735 ORTHO05D004550 1.7e-168 596.7 535 56.8
AL1G57300 Arabidopsis lyrata HOM05D003735 ORTHO05D004550 5.0e-168 595.1 499 60.5
CSS0020963 Camellia sinensis var. sinensis HOM05D003735 ORTHO05D004550 5.0e-168 595.1 497 62.2
FAN15G3608 Fragaria x ananassa HOM05D003735 ORTHO05D004550 8.5e-168 594.3 514 59.5
Prupe.7G233900 Prunus persica HOM05D003735 ORTHO05D004550 1.6e-166 590.1 497 59.2
Lj9C323T5 Lonicera japonica HOM05D003735 ORTHO05D004550 2.7e-166 589.3 450 65.8
Zm00001eb433310 Zea mays HOM05D003735 ORTHO05D004550 2.7e-166 589.3 502 59.4
Os04g0669800 Oryza sativa ssp. japonica HOM05D003735 ORTHO05D004550 3.6e-166 589.0 497 59.4
Aa31LG10G4250 Aethionema arabicum HOM05D003735 ORTHO05D004550 4.6e-166 588.6 498 59.6
HPP92_011617 Vanilla planifolia HOM05D003735 ORTHO05D004550 1.3e-165 587.0 499 58.7
CDE02G0578 Ceratophyllum demersum HOM05D003735 ORTHO05D004550 1.5e-164 583.6 502 57.2
CSS0002879 Camellia sinensis var. sinensis HOM05D003735 ORTHO05D004550 1.9e-164 583.2 450 65.8
Os04g0669900 Oryza sativa ssp. japonica HOM05D003735 ORTHO05D004550 2.2e-163 579.7 498 58.8
PSO541G1406 Papaver somniferum HOM05D003735 ORTHO05D004550 1.8e-162 576.6 498 60.2
MD10G1098200 Malus domestica HOM05D003735 ORTHO05D004550 6.9e-162 574.7 498 59.4
PSO675G8377 Papaver somniferum HOM05D003735 ORTHO05D004550 9.1e-162 574.3 498 59.6
Ah.01g018310 Amaranthus hybridus HOM05D003735 ORTHO05D004550 5.9e-161 571.6 501 58.9
TPR.G19078 Trifolium pratense HOM05D003735 ORTHO05D004550 5.0e-160 568.5 498 58.6
ATR0589G073 Amborella trichopoda HOM05D003735 ORTHO05D004550 1.9e-159 566.6 495 58.4
Lalb_Chr09g0319561 Lupinus albus HOM05D003735 ORTHO05D004550 1.0e-157 560.8 504 56.3
ECA232G2787 Erigeron canadensis HOM05D003735 ORTHO05D004550 8.8e-157 557.8 495 57.2
VMungo1215G1247 Vigna mungo HOM05D003735 ORTHO05D004550 1.2e-153 547.4 505 54.7
RcHm_v2.0_Chr6g0254921 Rosa chinensis HOM05D003735 ORTHO05D004550 9.4e-151 537.7 446 60.5
Sed0001414 Sechium edule HOM05D003735 ORTHO05D004550 5.2e-149 531.9 439 60.8
BcaC08g43149 Brassica carinata HOM05D003735 ORTHO05D004550 1.3e-147 527.3 498 55.2
TPR.G3238 Trifolium pratense HOM05D003735 ORTHO05D004550 2.8e-147 526.2 425 61.6
Eucgr.I01100 Eucalyptus grandis HOM05D003735 ORTHO05D004550 3.5e-145 519.2 423 61.7
vmacro01998 Vaccinium macrocarpon HOM05D003735 ORTHO05D004550 1.1e-143 514.2 498 56.2
SMO340G0152 Selaginella moellendorffii HOM05D003735 ORTHO05D004550 1.0e-141 507.7 490 52.7
Pp3c6_19060 Physcomitrium patens HOM05D003735 ORTHO05D004550 5.7e-140 501.9 493 50.3
AagrBONN_evm.TU.Sc2ySwM_344.2850 Anthoceros agrestis HOM05D003735 ORTHO05D004550 2.7e-137 493.0 492 51.6
DCAR_001652 Daucus carota HOM05D003735 ORTHO05D004550 8.0e-134 481.5 499 50.5
Mapoly0029s0020 Marchantia polymorpha HOM05D003735 ORTHO05D004550 1.7e-131 473.8 493 48.7
Cfa004590 Carpinus fangiana HOM05D003735 ORTHO05D004550 1.8e-125 453.8 291 72.2
CBR_g23696 Chara braunii HOM05D003735 ORTHO05D004550 9.8e-124 448.0 495 47.7
AUR62010319 Chenopodium quinoa HOM05D003735 ORTHO05D004550 5.4e-122 442.2 423 54.4
Peaxi162Scf00152g00332 Petunia axillaris HOM05D003735 ORTHO05D004550 1.8e-114 417.2 291 69.1
arahy.Tifrunner.gnm1.ann1.TAI6X1 Arachis hypogaea HOM05D003735 ORTHO05D004550 2.8e-110 403.3 394 54.8
QL11p033306 Quercus lobata HOM05D003735 ORTHO05D004550 8.3e-107 391.7 385 54.0
QL11p033359 Quercus lobata HOM05D003735 ORTHO05D004550 9.5e-103 378.3 222 77.5
CBR_g12222 Chara braunii HOM05D003735 ORTHO05D004550 5.8e-100 369.0 531 38.6
Cre16.g673550 Chlamydomonas reinhardtii HOM05D003735 ORTHO05D007494 4.0e-93 346.3 501 38.5
arahy.Tifrunner.gnm1.ann1.Z6IW8Q Arachis hypogaea HOM05D003735 ORTHO05D004550 3.5e-89 333.2 318 55.3
PRCOL_00000373 Prasinoderma coloniale HOM05D003735 ORTHO05D006943 7.8e-89 332.0 490 39.2
Glyma.01G244200 Glycine max HOM05D003735 ORTHO05D004550 1.6e-86 324.3 241 63.9
Nitab4.5_0026736g0020 Nicotiana tabacum HOM05D003735 ORTHO05D004550 3.1e-85 320.1 281 59.4
MCO11G261 Micromonas commoda HOM05D003735 ORTHO05D007494 2.6e-84 317.0 508 37.2
Nitab4.5_0001143g0070 Nicotiana tabacum HOM05D003735 ORTHO05D004550 1.3e-83 314.7 281 58.4
Cc02_g18410 Coffea canephora HOM05D003735 ORTHO05D004550 1.0e-72 278.5 303 51.2
arahy.Tifrunner.gnm1.ann1.83SMNU Arachis hypogaea HOM05D003735 ORTHO05D004550 4.0e-69 266.5 216 63.0
ATR0589G120 Amborella trichopoda HOM05D003735 ORTHO05D004550 9.6e-63 245.4 163 69.9
Cc01_g17410 Coffea canephora HOM05D003735 ORTHO05D004550 5.8e-60 236.1 256 50.4
arahy.Tifrunner.gnm1.ann1.B546P6 Arachis hypogaea HOM05D003735 ORTHO05D004550 1.0e-56 225.3 151 72.8
Peaxi162Scf00152g00233 Petunia axillaris HOM05D003735 ORTHO05D004550 3.9e-56 223.4 229 52.4
Hma1.2p1_1023F.1_g249070 Hydrangea macrophylla HOM05D003735 ORTHO05D004550 9.7e-55 218.8 341 40.5
Gorai.013G047300 Gossypium raimondii HOM05D003735 ORTHO05D004550 5.5e-50 203.0 181 54.7
Glyma.01G244132 Glycine max HOM05D003735 ORTHO05D004550 1.4e-48 198.4 239 47.3
ATR0589G125 Amborella trichopoda HOM05D003735 ORTHO05D004550 1.8e-48 198.0 118 77.1
QL11p033356 Quercus lobata HOM05D003735 ORTHO05D004550 1.1e-47 195.3 127 71.7
Ciclev10029480m.g Citrus clementina HOM05D003735 ORTHO05D004550 2.5e-47 194.1 261 45.2
Aqoxy6G02845 Aquilegia oxysepala HOM05D003735 ORTHO05D004550 3.1e-45 187.2 122 72.1
Nitab4.5_0001143g0030 Nicotiana tabacum HOM05D003735 ORTHO05D004550 4.2e-42 176.8 204 48.0
Gohir.A13G043900 Gossypium hirsutum HOM05D003735 ORTHO05D004550 5.1e-40 169.9 414 30.7
TAR376G0098 Trochodendron aralioides HOM05D003735 ORTHO05D004550 9.1e-37 159.1 100 73.0
ATR0589G028 Amborella trichopoda HOM05D003735 ORTHO05D004550 1.2e-36 158.7 122 61.5
Gohir.D13G042333 Gossypium hirsutum HOM05D003735 ORTHO05D004550 2.0e-36 157.9 420 30.2
TPR.G20408 Trifolium pratense HOM05D003735 ORTHO05D004550 1.6e-28 131.7 85 75.3
Gorai.013G047400 Gossypium raimondii HOM05D003735 ORTHO05D004550 3.5e-28 130.6 120 57.5
MBI14_g39937_MAGBIO Magnolia biondii HOM05D003735 ORTHO05D022889 5.2e-24 116.7 78 67.9
Nn4g25342 Nelumbo nucifera HOM05D003735 ORTHO05D004550 2.2e-22 111.3 71 71.8
Aqoxy6G02846 Aquilegia oxysepala HOM05D003735 ORTHO05D004550 2.1e-17 94.7 59 71.2
TPR.G31649 Trifolium pratense HOM05D000067 ORTHO05D000097 1.8e-16 91.7 146 37.0
TPR.G13570 Trifolium pratense HOM05D003735 ORTHO05D004354 1.2e-15 89.0 87 49.4
ATR0589G078 Amborella trichopoda HOM05D003735 ORTHO05D004550 3.3e-10 70.9 60 56.7
Cre07.g342900 Chlamydomonas reinhardtii HOM05D003735 ORTHO05D146703 2.2e-06 58.2 83 30.1


User provided reference genes

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