Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013689.1 Olea europaea HOM05D004563 ORTHO05D002944 4.3e-59 231.1 116 100.0
Oeu032703.1 Olea europaea HOM05D004563 ORTHO05D002944 4.3e-59 231.1 116 100.0
Hma1.2p1_0178F.1_g078980 Hydrangea macrophylla HOM05D004563 ORTHO05D002944 3.1e-17 92.0 121 45.5
CSS0011468 Camellia sinensis var. sinensis HOM05D004563 ORTHO05D002944 4.1e-17 91.7 121 43.8
TAR626G0818 Trochodendron aralioides HOM05D008023 ORTHO05D002944 9.1e-17 90.5 119 41.2
QL08p041398 Quercus lobata HOM05D004563 ORTHO05D002944 2.7e-16 89.0 115 40.9
vmacro09223 Vaccinium macrocarpon HOM05D004563 ORTHO05D002944 7.7e-16 87.4 120 44.2
CiPaw.04G131700 Carya illinoinensis HOM05D004563 ORTHO05D002944 2.2e-15 85.9 111 46.8
Rhsim04G0073900 Rhododendron simsii HOM05D004563 ORTHO05D002944 5.0e-15 84.7 136 41.9
SGA_v2.0_scaffold9G04806 Striga asiatica HOM05D004563 ORTHO05D002944 8.5e-15 84.0 116 44.0
TAR629G2655 Trochodendron aralioides HOM05D004563 ORTHO05D002944 2.5e-14 82.4 119 39.5
Haze_13348 Corylus avellana HOM05D004563 ORTHO05D002944 3.2e-14 82.0 118 44.1
MSTRG.14316 Avicennia marina HOM05D004563 ORTHO05D002944 5.5e-14 81.3 117 45.3
Cc05_g08130 Coffea canephora HOM05D004563 ORTHO05D002944 7.2e-14 80.9 113 41.6
Aqoxy1G03185 Aquilegia oxysepala HOM05D004563 ORTHO05D002944 9.4e-14 80.5 109 44.0
SalBow7G0936 Salvia bowleyana HOM05D004563 ORTHO05D002944 9.4e-14 80.5 119 43.7
Prupe.3G122900 Prunus persica HOM05D004563 ORTHO05D002944 1.2e-13 80.1 118 37.3
Migut.M00253 Erythranthe guttata HOM05D004563 ORTHO05D002944 2.1e-13 79.3 154 37.0
Peaxi162Scf00384g00511 Petunia axillaris HOM05D004563 ORTHO05D002944 2.1e-13 79.3 117 43.6
Dinv15459 Davidia involucrata HOM05D004563 ORTHO05D002944 1.8e-12 76.3 97 46.4
Actinidia11133 Actinidia chinensis HOM05D004563 ORTHO05D002944 6.8e-12 74.3 117 44.4
Actinidia10974 Actinidia chinensis HOM05D004563 ORTHO05D002944 2.0e-11 72.8 118 42.4
Eucgr.A01904 Eucalyptus grandis HOM05D004563 ORTHO05D002944 2.0e-11 72.8 111 39.6
FAN02G0553 Fragaria x ananassa HOM05D004563 ORTHO05D002944 2.0e-11 72.8 104 42.3
FAN09G1171 Fragaria x ananassa HOM05D004563 ORTHO05D002944 2.0e-11 72.8 104 42.3
MD17G1232800 Malus domestica HOM05D004563 ORTHO05D002944 2.0e-11 72.8 106 39.6
Sopen12g006190 Solanum pennellii HOM05D004563 ORTHO05D002944 2.0e-11 72.8 118 43.2
FAN09G4605 Fragaria x ananassa HOM05D004563 ORTHO05D002944 2.6e-11 72.4 103 41.7
Nitab4.5_0003827g0050 Nicotiana tabacum HOM05D004563 ORTHO05D002944 2.6e-11 72.4 115 41.7
CSS0006802 Camellia sinensis var. sinensis HOM05D004563 ORTHO05D002944 3.4e-11 72.0 122 42.6
SalBow7G0314 Salvia bowleyana HOM05D004563 ORTHO05D002944 3.4e-11 72.0 108 38.0
CAN.G318.9 Capsicum annuum HOM05D004563 ORTHO05D002944 4.4e-11 71.6 117 42.7
FvH4_6g27121 Fragaria vesca HOM05D004563 ORTHO05D002944 7.5e-11 70.9 116 39.7
Atru.chr6.2814 Acer truncatum HOM05D004563 ORTHO05D002944 9.8e-11 70.5 117 36.8
FAN14G3451 Fragaria x ananassa HOM05D004563 ORTHO05D002944 1.3e-10 70.1 116 38.8
Peaxi162Scf00469g00139 Petunia axillaris HOM05D004563 ORTHO05D002944 1.3e-10 70.1 123 40.7
Nitab4.5_0006772g0010 Nicotiana tabacum HOM05D004563 ORTHO05D002944 2.8e-10 68.9 118 40.7
Sopen07g027280 Solanum pennellii HOM05D004563 ORTHO05D002944 2.8e-10 68.9 120 38.3
Solyc12g010830.2 Solanum lycopersicum HOM05D004563 ORTHO05D002944 4.8e-10 68.2 118 41.5
Actinidia18792 Actinidia chinensis HOM05D008023 ORTHO05D002944 6.3e-10 67.8 114 34.2
Ciclev10015391m.g Citrus clementina HOM05D004563 ORTHO05D002944 8.3e-10 67.4 63 50.8
Sed0020403 Sechium edule HOM05D004563 ORTHO05D002944 8.3e-10 67.4 115 36.5
Solyc07g053320.4 Solanum lycopersicum HOM05D004563 ORTHO05D002944 8.3e-10 67.4 120 38.3
GSVIVG01020684001 Vitis vinifera HOM05D004563 ORTHO05D002944 8.3e-10 67.4 120 35.0
RcHm_v2.0_Chr2g0129081 Rosa chinensis HOM05D004563 ORTHO05D002944 1.8e-09 66.2 109 38.5
TAR627G0246 Trochodendron aralioides HOM05D008023 ORTHO05D002944 1.8e-09 66.2 95 42.1
CANSAT64G2099 Cannabis sativa HOM05D004563 ORTHO05D002944 2.4e-09 65.9 106 38.7
ClCG02G017950 Citrullus lanatus HOM05D004563 ORTHO05D002944 2.4e-09 65.9 108 38.9
PGSC0003DMG400020429 Solanum tuberosum HOM05D004563 ORTHO05D002944 3.1e-09 65.5 112 40.2
HanXRQChr17g0557991 Helianthus annuus HOM05D004563 ORTHO05D002944 5.4e-09 64.7 116 36.2
Sabra13G0099900 Salix brachista HOM05D004563 ORTHO05D002944 1.2e-08 63.5 109 38.5
TAR624G1329 Trochodendron aralioides HOM05D004563 ORTHO05D002944 1.2e-08 63.5 76 43.4
Potri.013G118000 Populus trichocarpa HOM05D004563 ORTHO05D002944 1.6e-08 63.2 113 38.9
Thecc.06G172300 Theobroma cacao HOM05D004563 ORTHO05D002944 1.6e-08 63.2 96 38.5
CAN.G456.28 Capsicum annuum HOM05D004563 ORTHO05D002944 2.0e-08 62.8 113 39.8
Duzib192G1010 Durio zibethinus HOM05D004563 ORTHO05D017903 2.7e-08 62.4 115 36.5
Lalb_Chr19g0133891 Lupinus albus HOM05D008023 ORTHO05D002944 3.5e-08 62.0 114 38.6
Gohir.A10G031400 Gossypium hirsutum HOM05D004563 ORTHO05D002944 5.9e-08 61.2 114 36.0
Gorai.011G033900 Gossypium raimondii HOM05D004563 ORTHO05D002944 5.9e-08 61.2 114 36.0
Nitab4.5_0000537g0100 Nicotiana tabacum HOM05D004563 ORTHO05D002944 5.9e-08 61.2 128 38.3
Cpa.g.sc209.31 Carica papaya HOM05D004563 ORTHO05D002944 7.7e-08 60.8 115 32.2
COL.COLO4_33545 Corchorus olitorius HOM05D004563 ORTHO05D002944 7.7e-08 60.8 117 29.9
Thecc.01G148500 Theobroma cacao HOM05D004563 ORTHO05D002944 1.0e-07 60.5 59 42.4
Duzib147G1211 Durio zibethinus HOM05D004563 ORTHO05D002944 2.3e-07 59.3 59 42.4
Actinidia35220 Actinidia chinensis HOM05D008023 ORTHO05D002944 2.9e-07 58.9 114 33.3
MBI07_g21399_MAGBIO Magnolia biondii HOM05D004563 ORTHO05D002944 2.9e-07 58.9 127 34.6
MD09G1239700 Malus domestica HOM05D004563 ORTHO05D002944 2.9e-07 58.9 106 35.8
Nitab4.5_0010797g0050 Nicotiana tabacum HOM05D004563 ORTHO05D002944 2.9e-07 58.9 114 35.1
Gohir.D10G032200 Gossypium hirsutum HOM05D004563 ORTHO05D002944 5.0e-07 58.2 114 35.1
CiPaw.12G114700 Carya illinoinensis HOM05D008023 ORTHO05D002944 6.6e-07 57.8 111 32.4
CSS0011548 Camellia sinensis var. sinensis HOM05D014353 ORTHO05D002944 8.6e-07 57.4 114 34.2
FAN05G5668 Fragaria x ananassa HOM05D004563 ORTHO05D002944 8.6e-07 57.4 58 48.3
Gorai.011G124100 Gossypium raimondii HOM05D004563 ORTHO05D002944 8.6e-07 57.4 97 36.1
CsaV3_6G018840 Cucumis sativus L. HOM05D004563 ORTHO05D002944 1.1e-06 57.0 114 36.8
Medtr4g079720 Medicago truncatula HOM05D004563 ORTHO05D002944 1.1e-06 57.0 93 35.5
PGR042G0272 Punica granatum HOM05D004563 ORTHO05D002944 1.1e-06 57.0 103 35.0
TWI59G1400 Tripterygium wilfordii HOM05D004563 ORTHO05D002944 1.5e-06 56.6 120 35.8
Glyma.12G209700 Glycine max HOM05D004563 ORTHO05D002944 3.3e-06 55.5 114 36.0
Gohir.A10G153900 Gossypium hirsutum HOM05D004563 ORTHO05D002944 3.3e-06 55.5 94 35.1
Phvul.005G096100 Phaseolus vulgaris HOM05D004563 ORTHO05D002944 3.3e-06 55.5 108 35.2
Prupe.4G170200 Prunus persica HOM05D008023 ORTHO05D002944 3.3e-06 55.5 93 40.9
Dinv14970 Davidia involucrata HOM05D008023 ORTHO05D002944 4.2e-06 55.1 122 32.0
Gohir.D10G112200 Gossypium hirsutum HOM05D004563 ORTHO05D002944 4.2e-06 55.1 94 35.1
GSVIVG01014227001 Vitis vinifera HOM05D008023 ORTHO05D002944 4.2e-06 55.1 107 33.6
Lj3g0002978 Lotus japonicus HOM05D008023 ORTHO05D002944 5.5e-06 54.7 106 34.9
VMungo1127G0722 Vigna mungo HOM05D008023 ORTHO05D002944 5.5e-06 54.7 99 39.4
Glyma.06G231200 Glycine max HOM05D008023 ORTHO05D002944 7.2e-06 54.3 111 35.1
Manes.13G138000 Manihot esculenta HOM05D004563 ORTHO05D002944 7.2e-06 54.3 106 34.0
VMungo1080G1187 Vigna mungo HOM05D002364 ORTHO05D002540 7.2e-06 54.3 108 34.3
FAN21G3782 Fragaria x ananassa HOM05D016724 ORTHO05D017903 9.5e-06 53.9 93 33.3
FAN25G1620 Fragaria x ananassa HOM05D016724 ORTHO05D017903 9.5e-06 53.9 108 31.5


User provided reference genes

Program Settings