Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013586.1 Olea europaea HOM05D004925 ORTHO05D005643 1.2e-164 583.2 300 100.0
Oeu024926.1 Olea europaea HOM05D004925 ORTHO05D005643 9.0e-16 88.6 72 59.7
Migut.N01664 Erythranthe guttata HOM05D004925 ORTHO05D005643 4.5e-15 86.3 56 73.2
SGA_v2.0_scaffold95G28775 Striga asiatica HOM05D004925 ORTHO05D005643 9.9e-15 85.1 59 69.5
Lj7A564G31 Lonicera japonica HOM05D004925 ORTHO05D005643 8.4e-14 82.0 65 60.0
Manes.10G151100 Manihot esculenta HOM05D004925 ORTHO05D005643 1.4e-13 81.3 51 76.5
MSTRG.5000 Avicennia marina HOM05D004925 ORTHO05D005643 1.9e-13 80.9 56 67.9
Cfa004806 Carpinus fangiana HOM05D004925 ORTHO05D005643 2.4e-13 80.5 68 61.8
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 2.4e-13 80.5 68 60.3
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 2.4e-13 80.5 68 60.3
Potri.001G229800 Populus trichocarpa HOM05D004925 ORTHO05D005643 5.4e-13 79.3 56 71.4
CAN.G261.6 Capsicum annuum HOM05D004925 ORTHO05D005643 7.1e-13 79.0 57 63.2
TWI73G1095 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 7.1e-13 79.0 86 55.8
Sopen01g033490 Solanum pennellii HOM05D004925 ORTHO05D005643 9.3e-13 78.6 256 31.2
CiPaw.13G000800 Carya illinoinensis HOM05D004925 ORTHO05D005643 1.6e-12 77.8 53 69.8
Nitab4.5_0000892g0140 Nicotiana tabacum HOM05D004925 ORTHO05D005643 1.6e-12 77.8 71 54.9
MD07G1002600 Malus domestica HOM05D004925 ORTHO05D005643 2.1e-12 77.4 62 58.1
SalBow4G1354 Salvia bowleyana HOM05D004925 ORTHO05D005643 2.1e-12 77.4 56 60.7
Dinv43491 Davidia involucrata HOM05D004925 ORTHO05D005643 2.7e-12 77.0 59 66.1
Prupe.2G004100 Prunus persica HOM05D004925 ORTHO05D005643 2.7e-12 77.0 63 58.7
CANSAT11G0505 Cannabis sativa HOM05D004925 ORTHO05D005643 3.5e-12 76.6 71 54.9
SalBow4G3044 Salvia bowleyana HOM05D004925 ORTHO05D005643 3.5e-12 76.6 56 60.7
Eucgr.G03409 Eucalyptus grandis HOM05D004925 ORTHO05D005643 4.6e-12 76.3 57 66.7
GSVIVG01001367001 Vitis vinifera HOM05D004925 ORTHO05D005643 4.6e-12 76.3 59 64.4
Nn2g15712 Nelumbo nucifera HOM05D004925 ORTHO05D005643 6.0e-12 75.9 54 63.0
Peaxi162Scf00878g00036 Petunia axillaris HOM05D004925 ORTHO05D005643 6.0e-12 75.9 60 60.0
TWI09G1281 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 6.0e-12 75.9 84 56.0
MD02G1318600 Malus domestica HOM05D004925 ORTHO05D005643 1.0e-11 75.1 62 58.1
Rhsim01G0134400 Rhododendron simsii HOM05D004925 ORTHO05D005643 1.3e-11 74.7 53 66.0
Dinv43931 Davidia involucrata HOM05D004925 ORTHO05D005643 1.8e-11 74.3 59 66.1
Hma1.2p1_0860F.1_g229570 Hydrangea macrophylla HOM05D004925 ORTHO05D005643 2.3e-11 73.9 87 49.4
Actinidia21578 Actinidia chinensis HOM05D004925 ORTHO05D005643 3.0e-11 73.6 63 57.1
Cc02_g27070 Coffea canephora HOM05D004925 ORTHO05D005643 3.9e-11 73.2 58 60.3
Thecc.01G416300 Theobroma cacao HOM05D004925 ORTHO05D005643 3.9e-11 73.2 59 57.6
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 3.9e-11 73.2 70 58.6
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 3.9e-11 73.2 70 58.6
Oeu053533.1 Olea europaea HOM05D004925 ORTHO05D005643 6.7e-11 72.4 253 33.2
RcHm_v2.0_Chr1g0313411 Rosa chinensis HOM05D004925 ORTHO05D005643 6.7e-11 72.4 81 51.9
TPR.G11699 Trifolium pratense HOM05D004925 ORTHO05D005643 6.7e-11 72.4 56 62.5
Solyc01g073920.3 Solanum lycopersicum HOM05D004925 ORTHO05D005643 8.7e-11 72.0 256 30.1
vmacro12585 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 1.9e-10 70.9 70 57.1
Sc17g0006850 Simmondsia chinensis HOM05D004925 ORTHO05D005643 2.5e-10 70.5 81 48.1
arahy.Tifrunner.gnm1.ann1.WEBP2W Arachis hypogaea HOM05D004925 ORTHO05D005643 4.3e-10 69.7 69 52.2
Medtr2g060910 Medicago truncatula HOM05D004925 ORTHO05D005643 7.4e-10 68.9 76 52.6
Lj3g0011601 Lotus japonicus HOM05D004925 ORTHO05D005643 9.6e-10 68.6 56 60.7
Ca_02951_v3 Cicer arietinum L. HOM05D004925 ORTHO05D005643 1.3e-09 68.2 56 58.9
COL.COLO4_25137 Corchorus olitorius HOM05D004925 ORTHO05D005643 1.3e-09 68.2 74 48.6
PGR119G0958 Punica granatum HOM05D004925 ORTHO05D005643 1.6e-09 67.8 58 62.1
SGA_v2.0_scaffold4G02236 Striga asiatica HOM05D001227 ORTHO05D001082 2.1e-09 67.4 49 65.3
TAR623G0394 Trochodendron aralioides HOM05D004925 ORTHO05D005643 2.1e-09 67.4 81 48.1
TAR369G0809 Trochodendron aralioides HOM05D004925 ORTHO05D005643 2.8e-09 67.0 56 55.4
MELO3C030929.2 Cucumis melo HOM05D004925 ORTHO05D005643 3.6e-09 66.6 90 48.9
FvH4_7g00160 Fragaria vesca HOM05D004925 ORTHO05D005643 3.6e-09 66.6 74 48.6
FAN10G2396 Fragaria x ananassa HOM05D004925 ORTHO05D005643 3.6e-09 66.6 74 48.6
Lalb_Chr03g0033881 Lupinus albus HOM05D004925 ORTHO05D005643 4.8e-09 66.2 56 57.1
Lalb_Chr25g0283541 Lupinus albus HOM05D004925 ORTHO05D005643 4.8e-09 66.2 86 48.8
QL04p003160 Quercus lobata HOM05D004925 ORTHO05D005643 6.2e-09 65.9 67 52.2
FAN06G2494 Fragaria x ananassa HOM05D004925 ORTHO05D005643 8.1e-09 65.5 58 55.2
Gohir.D08G037401 Gossypium hirsutum HOM05D004925 ORTHO05D005643 8.1e-09 65.5 53 54.7
Gorai.004G035400 Gossypium raimondii HOM05D004925 ORTHO05D005643 8.1e-09 65.5 53 54.7
Medtr4g125960 Medicago truncatula HOM05D004925 ORTHO05D005643 8.1e-09 65.5 60 58.3
Gohir.A08G026720 Gossypium hirsutum HOM05D004925 ORTHO05D005643 1.1e-08 65.1 51 54.9
CsaV3_3G032460 Cucumis sativus L. HOM05D004925 ORTHO05D005643 1.4e-08 64.7 56 60.7
FAN03G1097 Fragaria x ananassa HOM05D004925 ORTHO05D005643 1.4e-08 64.7 63 55.6
Glyma.15G269200 Glycine max HOM05D004925 ORTHO05D005643 1.4e-08 64.7 56 58.9
MBI19_g23208_MAGBIO Magnolia biondii HOM05D004925 ORTHO05D005643 1.4e-08 64.7 60 55.0
QL04p000066 Quercus lobata HOM05D004925 ORTHO05D005643 1.4e-08 64.7 91 46.2
Sed0003173 Sechium edule HOM05D004925 ORTHO05D005643 1.4e-08 64.7 67 55.2
A05p12810 Brassica napus HOM05D004925 ORTHO05D005643 1.8e-08 64.3 71 49.3
C04p16720 Brassica napus HOM05D004925 ORTHO05D005643 1.8e-08 64.3 71 47.9
BraA05t20219Z Brassica rapa HOM05D004925 ORTHO05D005643 1.8e-08 64.3 71 49.3
ClCG10G012660 Citrullus lanatus HOM05D004925 ORTHO05D005643 1.8e-08 64.3 62 56.5
CARHR126790 Cardamine hirsuta HOM05D004925 ORTHO05D005643 2.4e-08 63.9 56 57.1
FAN01G2076 Fragaria x ananassa HOM05D004925 ORTHO05D005643 2.4e-08 63.9 86 48.8
Actinidia15855 Actinidia chinensis HOM05D004925 ORTHO05D005643 4.0e-08 63.2 91 44.0
EL10Ac8g20283 Beta vulgaris HOM05D004925 ORTHO05D005643 4.0e-08 63.2 52 57.7
Ciclev10032226m.g Citrus clementina HOM05D004925 ORTHO05D005643 4.0e-08 63.2 66 56.1
Phvul.005G039900 Phaseolus vulgaris HOM05D004925 ORTHO05D005643 4.0e-08 63.2 56 57.1
AL4G28340 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 5.3e-08 62.8 73 50.7
Glyma.08G148900 Glycine max HOM05D004925 ORTHO05D005643 5.3e-08 62.8 66 50.0
Aa31LG5G4490 Aethionema arabicum HOM05D004925 ORTHO05D005643 6.9e-08 62.4 55 60.0
BolC4t23220H Brassica oleracea HOM05D004925 ORTHO05D005643 6.9e-08 62.4 71 46.5
Cpa.g.sc189.17 Carica papaya HOM05D004925 ORTHO05D005643 6.9e-08 62.4 57 57.9
BcaB02g10501 Brassica carinata HOM05D004925 ORTHO05D005643 9.0e-08 62.0 71 47.9
Carub.0004s1427 Capsella rubella HOM05D004925 ORTHO05D005643 1.5e-07 61.2 68 51.5
AT2G32840 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 2.0e-07 60.8 68 50.0
FAN01G0312 Fragaria x ananassa HOM05D004925 ORTHO05D005643 2.0e-07 60.8 86 47.7
Sed0010000 Sechium edule HOM05D004925 ORTHO05D005643 2.0e-07 60.8 63 50.8
Hund25510 Selenicereus undatus HOM05D004925 ORTHO05D005643 2.6e-07 60.5 49 57.1
CDE04G0753 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 3.4e-07 60.1 54 51.9
unitig_22.g5889 Utricularia gibba HOM05D004925 ORTHO05D005643 7.6e-07 58.9 211 32.7
Aqoxy1G00133 Aquilegia oxysepala HOM05D004925 ORTHO05D005643 9.9e-07 58.5 81 34.6
Zm00001eb399260 Zea mays HOM05D004925 ORTHO05D005643 9.9e-07 58.5 82 41.5
BcaB01g00977 Brassica carinata HOM05D004925 ORTHO05D005643 1.3e-06 58.2 70 45.7
Thhalv10016920m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 1.3e-06 58.2 77 45.5
HanXRQChr11g0341651 Helianthus annuus HOM05D004925 ORTHO05D005643 1.3e-06 58.2 84 39.3
AUR62015612 Chenopodium quinoa HOM05D004925 ORTHO05D005643 1.7e-06 57.8 55 52.7
ECA248G0029 Erigeron canadensis HOM05D004925 ORTHO05D005643 1.7e-06 57.8 58 48.3
THA.LOC104816029 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 1.7e-06 57.8 58 50.0
arahy.Tifrunner.gnm1.ann1.BFX48A Arachis hypogaea HOM05D004925 ORTHO05D005643 2.2e-06 57.4 69 47.8
Atru.chr11.2695 Acer truncatum HOM05D004925 ORTHO05D005643 2.9e-06 57.0 69 49.3
BolC5t29090H Brassica oleracea HOM05D004925 ORTHO05D005643 3.8e-06 56.6 66 48.5
Sp1g03770 Schrenkiella parvula HOM05D004925 ORTHO05D005643 3.8e-06 56.6 90 43.3
PSO384G4128 Papaver somniferum HOM05D004925 ORTHO05D005643 4.9e-06 56.2 52 50.0
A10p03360 Brassica napus HOM05D004925 ORTHO05D005643 6.4e-06 55.8 81 44.4
Duzib114G0283 Durio zibethinus HOM05D004925 ORTHO05D005643 6.4e-06 55.8 57 45.6
THA.LOC104801020 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 6.4e-06 55.8 209 30.6
BraA10t42612Z Brassica rapa HOM05D004925 ORTHO05D005643 8.4e-06 55.5 57 52.6


User provided reference genes

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