Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 9.5e-138 493.4 236 100.0
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 2.0e-79 299.7 230 64.3
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 2.9e-78 295.8 227 62.6
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 8.5e-78 294.3 227 63.4
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 2.5e-77 292.7 228 61.0
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 1.0e-75 287.3 230 59.1
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 6.7e-75 284.6 226 62.4
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 1.1e-74 283.9 220 64.1
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 8.2e-73 277.7 227 58.1
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 5.9e-71 271.6 231 57.1
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 5.9e-71 271.6 226 57.5
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 5.9e-71 271.6 228 54.8
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 7.7e-71 271.2 230 54.8
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 1.3e-70 270.4 236 60.6
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 2.2e-70 269.6 227 56.8
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 2.2e-70 269.6 232 58.2
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 5.0e-70 268.5 226 58.8
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 5.0e-70 268.5 227 55.1
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 3.2e-69 265.8 226 55.8
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 9.4e-69 264.2 229 57.2
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 1.2e-68 263.8 229 58.1
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 6.7e-67 258.1 220 55.9
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 1.5e-66 256.9 224 57.1
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 2.6e-66 256.1 222 56.3
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 4.4e-66 255.4 226 54.9
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 4.4e-66 255.4 220 55.5
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 9.7e-66 254.2 223 56.1
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 2.2e-65 253.1 226 54.9
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 2.2e-65 253.1 221 56.6
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 4.8e-65 251.9 225 55.6
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 6.3e-65 251.5 231 52.8
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 8.2e-65 251.1 226 54.4
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 8.2e-65 251.1 228 53.9
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.4e-64 250.4 228 54.8
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 2.4e-64 249.6 228 53.1
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 2.4e-64 249.6 228 55.7
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 5.3e-64 248.4 226 53.5
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 7.0e-64 248.1 221 57.0
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 1.5e-63 246.9 234 53.4
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 2.0e-63 246.5 228 53.9
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 2.2e-62 243.0 229 53.7
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 3.8e-62 242.3 234 55.6
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 8.5e-62 241.1 225 52.9
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 1.9e-61 240.0 252 50.8
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 3.2e-61 239.2 219 57.1
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 4.2e-61 238.8 228 52.2
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 5.5e-61 238.4 221 54.3
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 7.2e-61 238.0 229 52.0
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 1.2e-60 237.3 229 51.5
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 1.2e-60 237.3 222 53.2
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 1.6e-60 236.9 224 50.9
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.6e-60 236.9 222 52.7
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 1.6e-60 236.9 223 54.3
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 2.1e-60 236.5 226 54.4
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 4.7e-60 235.3 219 53.4
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 6.1e-60 235.0 220 53.2
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 1.4e-59 233.8 250 50.0
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 1.8e-59 233.4 226 51.3
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 2.3e-59 233.0 227 50.7
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 5.2e-59 231.9 229 50.7
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 6.7e-59 231.5 238 51.7
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 6.7e-59 231.5 220 52.7
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 1.1e-58 230.7 222 51.8
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 2.6e-58 229.6 226 51.3
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 1.3e-57 227.3 222 51.4
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 1.7e-57 226.9 220 52.3
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 3.7e-57 225.7 220 53.2
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 3.1e-56 222.6 232 50.9
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 5.3e-56 221.9 219 51.6
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 5.3e-56 221.9 220 50.9
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 1.3e-54 217.2 223 51.6
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 1.7e-54 216.9 227 49.3
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 2.2e-54 216.5 188 56.4
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 2.9e-54 216.1 230 48.7
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 6.5e-54 214.9 219 50.7
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 6.5e-54 214.9 219 50.7
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 6.5e-54 214.9 223 49.8
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 8.5e-54 214.5 219 49.8
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 8.5e-54 214.5 140 71.4
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 1.4e-51 207.2 168 59.5
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 5.2e-51 205.3 221 48.4
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 1.2e-50 204.1 156 63.5
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 9.8e-50 201.1 220 45.0
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 2.2e-49 199.9 224 49.1
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 8.3e-49 198.0 232 44.0
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 1.2e-47 194.1 219 48.4
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 1.5e-45 187.2 224 46.4
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 4.2e-45 185.7 167 53.9
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 1.6e-44 183.7 226 44.2
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 2.3e-43 179.9 216 46.8
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 1.4e-40 170.6 173 50.3
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 5.0e-38 162.2 252 38.9
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 6.6e-38 161.8 117 63.2
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 1.9e-37 160.2 190 48.4
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 1.7e-33 147.1 109 64.2
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 1.2e-31 141.0 268 31.0
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 1.1e-29 134.4 190 37.9
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 1.5e-29 134.0 128 50.0
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 1.9e-29 133.7 148 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 1.4e-27 127.5 193 39.4
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 1.6e-23 114.0 98 54.1
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 9.5e-21 104.8 121 45.5
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 4.0e-19 99.4 64 67.2
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 4.9e-17 92.4 98 49.0
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 9.2e-16 88.2 225 29.8
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 1.2e-15 87.8 99 48.5
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 3.5e-15 86.3 62 64.5
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 4.3e-13 79.3 131 38.2
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 2.9e-09 66.6 97 33.0
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 3.5e-07 59.7 58 48.3
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 6.6e-06 55.5 106 32.1


User provided reference genes

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