Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013426.2 Olea europaea HOM05D007491 ORTHO05D009489 5.4e-69 264.2 136 100.0
Rhsim01G0100500 Rhododendron simsii HOM05D007491 ORTHO05D009489 3.0e-19 99.0 96 60.4
Dinv41621 Davidia involucrata HOM05D007491 ORTHO05D009489 8.8e-19 97.4 94 61.7
Cc06_g09900 Coffea canephora HOM05D007491 ORTHO05D009489 2.5e-18 95.9 90 62.2
TAR383G0584 Trochodendron aralioides HOM05D007491 ORTHO05D009489 9.7e-18 94.0 96 58.3
CiPaw.03G229400 Carya illinoinensis HOM05D007491 ORTHO05D009489 1.1e-16 90.5 94 59.6
PGR102G1855 Punica granatum HOM05D007491 ORTHO05D009489 1.4e-16 90.1 91 58.2
Peaxi162Scf00231g00326 Petunia axillaris HOM05D007491 ORTHO05D009489 1.8e-16 89.7 91 59.3
COL.COLO4_18682 Corchorus olitorius HOM05D007491 ORTHO05D009489 4.1e-16 88.6 96 53.1
AT1G55205 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 9.1e-16 87.4 92 57.6
Gohir.D06G094200 Gossypium hirsutum HOM05D007491 ORTHO05D009489 9.1e-16 87.4 100 54.0
Gorai.010G108700 Gossypium raimondii HOM05D007491 ORTHO05D009489 9.1e-16 87.4 100 54.0
TWI34G1809 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 9.1e-16 87.4 96 55.2
THA.LOC104822629 Tarenaya hassleriana HOM05D007491 ORTHO05D009489 1.5e-15 86.7 94 57.4
CSS0038485 Camellia sinensis var. sinensis HOM05D007491 ORTHO05D009489 2.0e-15 86.3 95 55.8
Eucgr.C03814 Eucalyptus grandis HOM05D007491 ORTHO05D009489 2.0e-15 86.3 93 53.8
Nn3g18087 Nelumbo nucifera HOM05D007491 ORTHO05D009489 2.0e-15 86.3 96 55.2
Thecc.09G041400 Theobroma cacao HOM05D007491 ORTHO05D009489 2.0e-15 86.3 95 54.7
Carub.0003s1318 Capsella rubella HOM05D007491 ORTHO05D009489 2.6e-15 85.9 92 60.9
Nn2g11682 Nelumbo nucifera HOM05D007491 ORTHO05D009489 3.4e-15 85.5 94 55.3
Carub.0001s4372 Capsella rubella HOM05D007491 ORTHO05D009489 4.5e-15 85.1 92 57.6
Cfa003238 Carpinus fangiana HOM05D007491 ORTHO05D009489 4.5e-15 85.1 98 58.2
Potri.018G082800 Populus trichocarpa HOM05D007491 ORTHO05D009489 5.9e-15 84.7 96 53.1
AT3G13674 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 7.7e-15 84.3 93 60.2
Duzib150G1582 Durio zibethinus HOM05D007491 ORTHO05D009489 7.7e-15 84.3 96 57.3
Thhalv10021835m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 1.0e-14 84.0 92 56.5
Glyma.08G037500 Glycine max HOM05D007491 ORTHO05D009489 1.0e-14 84.0 91 56.0
Dinv36653 Davidia involucrata HOM05D007491 ORTHO05D009489 1.3e-14 83.6 91 58.2
GSVIVG01035656001 Vitis vinifera HOM05D007491 ORTHO05D009489 1.3e-14 83.6 94 55.3
Sabra18G0070600 Salix brachista HOM05D007491 ORTHO05D009489 2.2e-14 82.8 96 54.2
TPR.G23496 Trifolium pratense HOM05D007491 ORTHO05D009489 2.2e-14 82.8 90 53.3
Ca_17329_v3 Cicer arietinum L. HOM05D007491 ORTHO05D009489 2.9e-14 82.4 95 55.8
Manes.03G022800 Manihot esculenta HOM05D007491 ORTHO05D009489 3.8e-14 82.0 89 55.1
TWI63G0394 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 5.0e-14 81.6 96 52.1
Prupe.7G233600 Prunus persica HOM05D007491 ORTHO05D009489 6.5e-14 81.3 93 54.8
ClCG11G002390 Citrullus lanatus HOM05D007491 ORTHO05D009489 8.5e-14 80.9 95 54.7
Haze_25768 Corylus avellana HOM05D007491 ORTHO05D009489 1.1e-13 80.5 96 55.2
Hma1.2p1_1463F.1_g285180 Hydrangea macrophylla HOM05D007491 ORTHO05D009489 1.1e-13 80.5 106 50.0
Sed0025893 Sechium edule HOM05D007491 ORTHO05D009489 1.1e-13 80.5 97 54.6
AL1G63250 Arabidopsis lyrata HOM05D007491 ORTHO05D009489 5.5e-13 78.2 92 54.3
RcHm_v2.0_Chr2g0090011 Rosa chinensis HOM05D007491 ORTHO05D009489 5.5e-13 78.2 92 55.4
Duzib187G0523 Durio zibethinus HOM05D007491 ORTHO05D009489 7.2e-13 77.8 95 50.5
FvH4_1g04361 Fragaria vesca HOM05D007491 ORTHO05D009489 7.2e-13 77.8 91 53.8
FAN23G1386 Fragaria x ananassa HOM05D007491 ORTHO05D009489 7.2e-13 77.8 91 53.8
CARHR088390 Cardamine hirsuta HOM05D007491 ORTHO05D009489 9.4e-13 77.4 93 55.9
Ciclev10010011m.g Citrus clementina HOM05D007491 ORTHO05D009489 9.4e-13 77.4 97 51.5
FAN19G0791 Fragaria x ananassa HOM05D007491 ORTHO05D009489 9.4e-13 77.4 91 53.8
Gohir.A06G094700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 9.4e-13 77.4 106 47.2
CANSAT78G0421 Cannabis sativa HOM05D007491 ORTHO05D009489 1.2e-12 77.0 93 54.8
CARHR044840 Cardamine hirsuta HOM05D007491 ORTHO05D009489 1.2e-12 77.0 92 54.3
CsaV3_2G002190 Cucumis sativus L. HOM05D007491 ORTHO05D009489 1.6e-12 76.6 94 51.1
C06p10160 Brassica napus HOM05D007491 ORTHO05D009489 2.1e-12 76.3 92 52.2
CDE05G2495 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 2.1e-12 76.3 90 48.9
Lalb_Chr16g0388121 Lupinus albus HOM05D007491 ORTHO05D009489 2.1e-12 76.3 91 50.5
Thhalv10011893m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 3.6e-12 75.5 90 51.1
Sed0000101 Sechium edule HOM05D007491 ORTHO05D009489 3.6e-12 75.5 95 51.6
MD15G1182000 Malus domestica HOM05D007491 ORTHO05D009489 4.7e-12 75.1 94 55.3
Manes.16G071301 Manihot esculenta HOM05D007491 ORTHO05D009489 4.7e-12 75.1 94 50.0
CDE05G0808 Ceratophyllum demersum HOM05D007491 ORTHO05D009489 6.1e-12 74.7 92 52.2
Gohir.A07G005300 Gossypium hirsutum HOM05D007491 ORTHO05D009489 6.1e-12 74.7 92 52.2
Gohir.D07G006700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 6.1e-12 74.7 92 52.2
VMungo0251G1641 Vigna mungo HOM05D007491 ORTHO05D009489 7.9e-12 74.3 90 51.1
A06p00340 Brassica napus HOM05D007491 ORTHO05D009489 1.0e-11 73.9 92 52.2
BraA06t23249Z Brassica rapa HOM05D007491 ORTHO05D009489 1.0e-11 73.9 92 52.2
ECA234G1405 Erigeron canadensis HOM05D007491 ORTHO05D009489 1.0e-11 73.9 91 49.5
Phvul.002G312200 Phaseolus vulgaris HOM05D007491 ORTHO05D009489 1.0e-11 73.9 91 50.5
Thecc.09G107500 Theobroma cacao HOM05D007491 ORTHO05D009489 1.0e-11 73.9 92 55.4
PSO782G0237 Papaver somniferum HOM05D007491 ORTHO05D009489 1.4e-11 73.6 97 52.6
MELO3C004564.2 Cucumis melo HOM05D007491 ORTHO05D009489 1.8e-11 73.2 93 49.5
TWI32G0642 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 1.8e-11 73.2 98 51.0
AUR62009312 Chenopodium quinoa HOM05D007491 ORTHO05D009489 2.3e-11 72.8 93 53.8
Medtr8g103300 Medicago truncatula HOM05D007491 ORTHO05D009489 2.3e-11 72.8 94 51.1
Psat7g015280 Pisum sativum HOM05D007491 ORTHO05D009489 2.3e-11 72.8 90 51.1
HanXRQChr12g0355021 Helianthus annuus HOM05D007491 ORTHO05D009489 3.9e-11 72.0 90 46.7
FAN26G2745 Fragaria x ananassa HOM05D001691 ORTHO05D001704 5.1e-11 71.6 90 51.1
MD02G1043400 Malus domestica HOM05D007491 ORTHO05D009489 5.1e-11 71.6 93 51.6
BcaC01g01475 Brassica carinata HOM05D007491 ORTHO05D009489 6.7e-11 71.2 94 50.0
C03p92400 Brassica napus HOM05D007491 ORTHO05D009489 6.7e-11 71.2 94 50.0
Ah.16g106040 Amaranthus hybridus HOM05D007491 ORTHO05D009489 8.8e-11 70.9 93 49.5
BcaB04g16984 Brassica carinata HOM05D007491 ORTHO05D009489 1.1e-10 70.5 91 52.7
HanXRQChr10g0318621 Helianthus annuus HOM05D007491 ORTHO05D009489 1.1e-10 70.5 91 48.4
A08p00850 Brassica napus HOM05D007491 ORTHO05D009489 1.5e-10 70.1 101 47.5
BolC6t36089H Brassica oleracea HOM05D000490 ORTHO05D000785 1.5e-10 70.1 83 50.6
Lj2g0023927 Lotus japonicus HOM05D007491 ORTHO05D009489 1.5e-10 70.1 94 52.1
BraA08t32143Z Brassica rapa HOM05D007491 ORTHO05D009489 2.0e-10 69.7 94 48.9
PSO566G0269 Papaver somniferum HOM05D007491 ORTHO05D009489 2.0e-10 69.7 97 51.5
Sp1g40890 Schrenkiella parvula HOM05D007491 ORTHO05D009489 2.0e-10 69.7 95 49.5
BolC3t21548H Brassica oleracea HOM05D007491 ORTHO05D009489 3.3e-10 68.9 101 47.5
Glyma.05G230000 Glycine max HOM05D007491 ORTHO05D009489 3.3e-10 68.9 91 50.5
Lalb_Chr05g0222981 Lupinus albus HOM05D007491 ORTHO05D009489 3.3e-10 68.9 90 48.9
Lj4g0004733 Lotus japonicus HOM05D007491 ORTHO05D009489 5.7e-10 68.2 48 68.8
Lsat_1_v5_gn_5_103040 Lactuca sativa HOM05D007491 ORTHO05D009489 9.7e-10 67.4 96 46.9
Ciclev10010763m.g Citrus clementina HOM05D007491 ORTHO05D009489 1.3e-09 67.0 52 67.3
EL10Ac2g04054 Beta vulgaris HOM05D007491 ORTHO05D009489 2.2e-09 66.2 90 51.1
Gorai.001G006300 Gossypium raimondii HOM05D007491 ORTHO05D009489 2.8e-09 65.9 88 48.9
Hund19532 Selenicereus undatus HOM05D007491 ORTHO05D009489 1.1e-08 63.9 101 44.6
MBI01_g30748_MAGBIO Magnolia biondii HOM05D007491 ORTHO05D009489 1.8e-08 63.2 97 42.3
SHI47168 Sapria himalayana HOM05D007491 ORTHO05D009489 3.1e-08 62.4 102 42.2
Lsat_1_v5_gn_5_33441 Lactuca sativa HOM05D007491 ORTHO05D009489 4.1e-08 62.0 87 44.8
arahy.Tifrunner.gnm1.ann1.KI7M62 Arachis hypogaea HOM05D007491 ORTHO05D009489 5.3e-08 61.6 91 46.2
arahy.Tifrunner.gnm1.ann1.RT52KZ Arachis hypogaea HOM05D007491 ORTHO05D009489 2.0e-07 59.7 83 48.2
HanXRQChr08g0220621 Helianthus annuus HOM05D007293 ORTHO05D009143 1.3e-06 57.0 69 43.5
Os06g0332500 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 1.3e-06 57.0 91 41.8
Os02g0273900 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 2.9e-06 55.8 49 53.1
QL12p012005 Quercus lobata HOM05D006762 ORTHO05D003505 3.8e-06 55.5 87 39.1
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 5.0e-06 55.1 77 46.8
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 6.5e-06 54.7 100 40.0
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 6.5e-06 54.7 93 36.6
Glyma.13G236300 Glycine max HOM05D002091 ORTHO05D002140 8.5e-06 54.3 97 37.1


User provided reference genes

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