Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 1.9e-165 585.9 319 100.0
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 1.7e-76 290.4 200 79.5
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 1.1e-61 241.1 199 65.8
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 4.8e-60 235.7 197 67.5
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 4.8e-60 235.7 224 60.7
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 8.2e-60 235.0 195 71.3
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 7.0e-59 231.9 201 66.7
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.6e-58 230.7 208 66.8
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.0e-58 230.3 215 62.8
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 2.0e-58 230.3 215 62.8
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.7e-58 229.9 198 71.2
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.0e-57 228.0 166 75.9
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 1.7e-57 227.3 206 62.1
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 6.5e-57 225.3 200 67.0
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 6.5e-57 225.3 208 66.3
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 4.2e-56 222.6 160 73.8
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 7.2e-56 221.9 186 67.2
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 7.2e-56 221.9 229 59.0
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 1.2e-55 221.1 192 63.5
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.6e-55 220.7 201 64.7
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 1.6e-55 220.7 198 62.6
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 2.7e-55 219.9 218 59.6
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 1.4e-54 217.6 207 61.8
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 1.8e-54 217.2 213 61.0
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 2.3e-54 216.9 169 70.4
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 2.3e-54 216.9 199 63.8
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 6.8e-54 215.3 220 58.2
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 8.8e-54 214.9 198 59.6
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 1.2e-53 214.5 198 59.1
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 2.6e-53 213.4 199 63.8
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 2.2e-52 210.3 199 61.3
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 2.2e-52 210.3 199 61.3
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 3.7e-52 209.5 199 61.3
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 6.3e-52 208.8 203 60.1
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 1.4e-51 207.6 199 59.8
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 1.8e-51 207.2 178 64.6
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 2.4e-51 206.8 198 60.1
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 2.4e-51 206.8 198 60.1
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 3.1e-51 206.5 211 62.1
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 3.1e-51 206.5 203 61.1
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 4.1e-51 206.1 203 61.6
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 5.4e-51 205.7 210 60.5
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 9.1e-51 204.9 207 60.4
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 9.1e-51 204.9 209 56.5
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 9.1e-51 204.9 200 60.5
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.0e-50 203.8 197 58.9
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 2.0e-50 203.8 214 56.5
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 2.0e-50 203.8 210 59.5
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 2.0e-50 203.8 211 56.4
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 3.5e-50 203.0 225 56.0
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 4.5e-50 202.6 172 64.5
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 1.7e-49 200.7 205 58.0
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 1.7e-49 200.7 208 59.1
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 2.9e-49 199.9 201 60.2
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 5.0e-49 199.1 204 56.9
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.5e-48 197.6 202 58.9
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 3.2e-48 196.4 199 59.3
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 3.2e-48 196.4 140 71.4
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 5.5e-48 195.7 191 60.7
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 7.2e-48 195.3 159 67.3
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 1.2e-47 194.5 207 56.0
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 1.2e-47 194.5 202 55.9
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.6e-47 194.1 201 57.2
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.6e-47 194.1 150 68.0
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 2.1e-47 193.7 158 67.7
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 2.7e-47 193.4 159 62.3
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 8.0e-47 191.8 153 69.3
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 2.3e-46 190.3 169 62.1
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 5.2e-46 189.1 160 65.6
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 5.2e-46 189.1 201 54.2
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 5.2e-46 189.1 173 60.7
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 5.2e-46 189.1 203 55.2
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 5.2e-46 189.1 164 64.0
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 8.8e-46 188.3 213 54.9
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 1.2e-45 188.0 212 55.2
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 1.5e-45 187.6 162 62.3
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.5e-45 187.6 192 57.8
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 1.5e-45 187.6 159 62.9
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 3.4e-45 186.4 201 54.2
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 4.4e-45 186.0 204 57.8
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 5.7e-45 185.7 178 59.6
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 9.8e-45 184.9 144 69.4
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.2e-44 183.7 161 61.5
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 3.7e-44 183.0 194 56.7
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 3.7e-44 183.0 174 60.3
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 4.9e-44 182.6 195 55.4
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 6.3e-44 182.2 166 60.8
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 1.1e-43 181.4 232 51.3
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.1e-43 181.4 198 52.5
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 5.4e-43 179.1 209 51.7
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 9.2e-43 178.3 158 60.8
Oeu056500.1 Olea europaea HOM05D026292 ORTHO05D008336 1.2e-42 177.9 104 90.4
Oeu060550.1 Olea europaea HOM05D026292 ORTHO05D008336 1.2e-42 177.9 104 91.3
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 1.6e-42 177.6 208 52.9
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 1.6e-42 177.6 194 54.1
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 2.0e-42 177.2 123 72.4
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 1.3e-41 174.5 212 50.5
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 1.3e-41 174.5 204 52.5
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.7e-41 174.1 190 54.2
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 1.7e-41 174.1 207 54.1
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 6.6e-41 172.2 155 56.8
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 8.6e-41 171.8 106 78.3
Oeu036475.1 Olea europaea HOM05D026292 ORTHO05D008336 4.3e-40 169.5 102 89.2
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 7.3e-40 168.7 106 77.4
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 8.0e-39 165.2 166 53.0
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 1.5e-37 161.0 106 67.9
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.6e-34 151.0 134 61.9
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.7e-34 150.2 182 52.2
Oeu050102.1 Olea europaea HOM05D026292 ORTHO05D008336 2.7e-34 150.2 125 71.2
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 1.3e-33 147.9 88 80.7
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 5.4e-27 125.9 150 53.3
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 1.2e-26 124.8 128 49.2
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 5.6e-24 115.9 101 51.5
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 1.8e-22 110.9 110 50.0
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 4.0e-22 109.8 178 39.9
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 4.0e-22 109.8 160 48.1
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 3.9e-17 93.2 144 49.3
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 1.5e-16 91.3 158 43.0
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 3.1e-14 83.6 72 55.6
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 3.5e-10 70.1 113 48.7
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 4.7e-07 59.7 52 59.6


User provided reference genes

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